RNA–Protein interactions for RNA: YNL172W

APC1, Transcript of Largest subunit of the Anaphase-Promoting Complex/Cyclosome, yeast

Gene APC1, Length 5,247 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APC1	YNL172W	YBL111C	Q3E7Y5	667 aa		4.38	□□□□□ -1.71
APC1	YNL172W	CMD1	P06787	147 aa	Known RBP	4.38	□□□□□ -1.71
APC1	YNL172W	GPA1	P08539	472 aa		4.38	□□□□□ -1.71
APC1	YNL172W	HAP4	P14064	554 aa		4.38	□□□□□ -1.71
APC1	YNL172W	PDX1	P16451	410 aa		4.38	□□□□□ -1.71
APC1	YNL172W	URA1	P28272	314 aa	Predicted RBP	4.38	□□□□□ -1.71
APC1	YNL172W	ORC2	P32833	620 aa		4.38	□□□□□ -1.71
APC1	YNL172W	DED81	P38707	554 aa	Known RBP	4.38	□□□□□ -1.71
APC1	YNL172W	ERG10	P41338	398 aa	Known RBP	4.38	□□□□□ -1.71
APC1	YNL172W	MCA1	Q08601	432 aa		4.38	□□□□□ -1.71
APC1	YNL172W	YPL191C	Q08930	360 aa		4.38	□□□□□ -1.71
APC1	YNL172W	IPP1	P00817	287 aa	Known RBP	4.37	□□□□□ -1.71
APC1	YNL172W	CHS1	P08004	1131 aa		4.37	□□□□□ -1.71
APC1	YNL172W	LHS1	P36016	881 aa		4.37	□□□□□ -1.71
APC1	YNL172W	SCS2	P40075	244 aa	Known RBP	4.37	□□□□□ -1.71
APC1	YNL172W	YMR134W	P40207	237 aa		4.37	□□□□□ -1.71
APC1	YNL172W	YIR014W	P40570	242 aa		4.37	□□□□□ -1.71
APC1	YNL172W	CSN12	P47130	423 aa		4.37	□□□□□ -1.71
APC1	YNL172W	ATG10	Q07879	167 aa		4.37	□□□□□ -1.71
APC1	YNL172W	RTT10	Q08924	1013 aa		4.37	□□□□□ -1.71
APC1	YNL172W	MHF2	Q3E829	80 aa		4.37	□□□□□ -1.71
APC1	YNL172W	LEU4	P06208	619 aa	Known RBP	4.37	□□□□□ -1.71
APC1	YNL172W	SEC65	P29478	273 aa		4.37	□□□□□ -1.71
APC1	YNL172W	MRP4	P32902	394 aa		4.37	□□□□□ -1.71
APC1	YNL172W	TIP20	P33891	701 aa		4.37	□□□□□ -1.71
APC1	YNL172W	CUP9	P41817	306 aa		4.37	□□□□□ -1.71
APC1	YNL172W	RMD9	P53140	646 aa	Known RBP	4.37	□□□□□ -1.71
APC1	YNL172W	RAD7	P06779	565 aa		4.37	□□□□□ -1.71
APC1	YNL172W	RHO1	P06780	209 aa	Known RBP	4.37	□□□□□ -1.71
APC1	YNL172W	TYR1	P20049	452 aa		4.37	□□□□□ -1.71
APC1	YNL172W	DBP8	P38719	431 aa		4.37	□□□□□ -1.71
APC1	YNL172W	DUN1	P39009	513 aa		4.37	□□□□□ -1.71
APC1	YNL172W	ZAP1	P47043	880 aa		4.37	□□□□□ -1.71
APC1	YNL172W	REH1	Q06709	432 aa		4.37	□□□□□ -1.71
APC1	YNL172W	FDH1	Q08911	376 aa		4.37	□□□□□ -1.71
APC1	YNL172W	SAM3	Q08986	587 aa		4.37	□□□□□ -1.71
APC1	YNL172W	KCS1	Q12494	1050 aa		4.37	□□□□□ -1.71
APC1	YNL172W	HSH49	Q99181	213 aa	Predicted RBP	4.37	□□□□□ -1.71
APC1	YNL172W	GSC2	P40989	1895 aa		4.37	□□□□□ -1.71
APC1	YNL172W	RFS1	P38234	210 aa	Known RBP	4.37	□□□□□ -1.71
APC1	YNL172W	AIM18	P38884	321 aa		4.37	□□□□□ -1.71
APC1	YNL172W	YJL068C	P40363	299 aa		4.37	□□□□□ -1.71
APC1	YNL172W	TMA108	P40462	946 aa		4.37	□□□□□ -1.71
APC1	YNL172W	VPS73	P53142	486 aa	Known RBP	4.37	□□□□□ -1.71
APC1	YNL172W	CRN1	Q06440	651 aa		4.37	□□□□□ -1.71
APC1	YNL172W	TPO4	Q12256	659 aa		4.37	□□□□□ -1.71
APC1	YNL172W	AHA1	Q12449	350 aa	Known RBP	4.37	□□□□□ -1.71
APC1	YNL172W	SPE4	Q12455	300 aa		4.37	□□□□□ -1.71
APC1	YNL172W	FRT1	Q99332	602 aa		4.37	□□□□□ -1.71
APC1	YNL172W	NSP1	P14907	823 aa	Known RBP	4.36	□□□□□ -1.71
APC1	YNL172W	HRR25	P29295	494 aa	Known RBP	4.36	□□□□□ -1.71
APC1	YNL172W	GCS1	P35197	352 aa		4.36	□□□□□ -1.71
APC1	YNL172W	MUD2	P36084	527 aa	Known RBP	4.36	□□□□□ -1.71
APC1	YNL172W	MNT3	P40549	630 aa		4.36	□□□□□ -1.71
APC1	YNL172W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.36	□□□□□ -1.71	not detected
APC1	YNL172W	ROG1	P53118	685 aa		4.36	□□□□□ -1.71
APC1	YNL172W	TRM8	Q12009	286 aa		4.36	□□□□□ -1.71
APC1	YNL172W	SUL2	Q12325	893 aa		4.36	□□□□□ -1.71
APC1	YNL172W	MSB2	P32334	1306 aa		4.36	□□□□□ -1.71
APC1	YNL172W	PHO2	P07269	559 aa		4.36	□□□□□ -1.71
APC1	YNL172W	REV1	P12689	985 aa		4.36	□□□□□ -1.71
APC1	YNL172W	MGR1	P25573	417 aa		4.36	□□□□□ -1.71
APC1	YNL172W	OXP1	P28273	1286 aa		4.36	□□□□□ -1.71
APC1	YNL172W	YBR056W	P38081	501 aa		4.36	□□□□□ -1.71
APC1	YNL172W	SHU2	P38957	223 aa		4.36	□□□□□ -1.71
APC1	YNL172W	SOK1	P40317	901 aa		4.36	□□□□□ -1.71
APC1	YNL172W	ATG3	P40344	310 aa		4.36	□□□□□ -1.71
APC1	YNL172W	CCT8	P47079	568 aa	Known RBP	4.36	□□□□□ -1.71
APC1	YNL172W	TAH11	P47112	604 aa		4.36	□□□□□ -1.71
APC1	YNL172W	MTQ2	Q03920	221 aa	Predicted RBP	4.36	□□□□□ -1.71
APC1	YNL172W	TRM12	Q04235	462 aa		4.36	□□□□□ -1.71
APC1	YNL172W	CDC73	Q06697	393 aa		4.36	□□□□□ -1.71
APC1	YNL172W	BSC6	Q08280	497 aa		4.36	□□□□□ -1.71
APC1	YNL172W	IOC2	Q12072	812 aa		4.36	□□□□□ -1.71
APC1	YNL172W	NCP1	P16603	691 aa	Known RBP	4.36	□□□□□ -1.71
APC1	YNL172W	IMG1	P25626	169 aa		4.36	□□□□□ -1.71
APC1	YNL172W	BUB3	P26449	341 aa		4.36	□□□□□ -1.71
APC1	YNL172W	DPB3	P27344	201 aa		4.36	□□□□□ -1.71
APC1	YNL172W	SLC1	P33333	303 aa		4.36	□□□□□ -1.71
APC1	YNL172W	GMH1	P36125	273 aa		4.36	□□□□□ -1.71
APC1	YNL172W	GLY1	P37303	387 aa	Known RBP	4.36	□□□□□ -1.71
APC1	YNL172W	URC2	Q04411	772 aa		4.36	□□□□□ -1.71
APC1	YNL172W	CDD1	Q06549	142 aa		4.36	□□□□□ -1.71
APC1	YNL172W	AKR2	Q12013	749 aa		4.36	□□□□□ -1.71
APC1	YNL172W	DBP10	Q12389	995 aa	Known RBP	4.36	□□□□□ -1.71
APC1	YNL172W	IZH4	Q99393	312 aa		4.36	□□□□□ -1.71
APC1	YNL172W	INH1	P01097	85 aa		4.36	□□□□□ -1.71
APC1	YNL172W	SPO7	P18410	259 aa		4.36	□□□□□ -1.71
APC1	YNL172W	OMA1	P36163	345 aa		4.36	□□□□□ -1.71
APC1	YNL172W	CEP3	P40969	608 aa		4.36	□□□□□ -1.71
APC1	YNL172W	LSB3	P43603	459 aa	Known RBP	4.36	□□□□□ -1.71
APC1	YNL172W	YJR141W	P47172	347 aa	Predicted RBP	4.36	□□□□□ -1.71
APC1	YNL172W	KXD1	P53158	218 aa		4.36	□□□□□ -1.71
APC1	YNL172W	HOL1	P53389	586 aa		4.36	□□□□□ -1.71
APC1	YNL172W	BET4	Q00618	327 aa		4.36	□□□□□ -1.71
APC1	YNL172W	SHR3	Q02774	210 aa		4.36	□□□□□ -1.71
APC1	YNL172W	SVL3	Q03088	825 aa	Known RBP	4.36	□□□□□ -1.71
APC1	YNL172W	OMS1	Q06668	471 aa		4.36	□□□□□ -1.71
APC1	YNL172W	YEL076C-A	P0CX16	216 aa		4.35	□□□□□ -1.71
APC1	YNL172W	YLR464W	P0CX17	216 aa		4.35	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms