RNA–Protein interactions for RNA: YMR185W

RTP1, Transcript of Protein required for the nuclear import and biogenesis of RNA pol II, yeastyeast

Gene RTP1, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTP1YMR185W CLD1P53264 445 aa1.8□□□□□ -2.12
RTP1YMR185W UTP8P53276 713 aaKnown RBP1.8□□□□□ -2.12
RTP1YMR185W ARC35P53731 342 aaKnown RBP1.8□□□□□ -2.12
RTP1YMR185W CUS2P53830 285 aaPredicted RBP1.8□□□□□ -2.12
RTP1YMR185W YNL146WP53906 100 aa1.8□□□□□ -2.12
RTP1YMR185W YNL095CP53932 642 aa1.8□□□□□ -2.12
RTP1YMR185W GPD1Q00055 391 aaKnown RBP1.8□□□□□ -2.12
RTP1YMR185W NOG1Q02892 647 aaKnown RBP1.8□□□□□ -2.12
RTP1YMR185W MMT1Q03218 510 aa1.8□□□□□ -2.12
RTP1YMR185W YML108WQ03759 105 aa1.8□□□□□ -2.12
RTP1YMR185W GRX3Q03835 250 aa1.8□□□□□ -2.12
RTP1YMR185W RNH1Q04740 348 aa1.8□□□□□ -2.12
RTP1YMR185W RXT3Q07458 294 aa1.8□□□□□ -2.12
RTP1YMR185W NRT1Q08485 598 aa1.8□□□□□ -2.12
RTP1YMR185W MUM3Q08750 479 aa1.8□□□□□ -2.12
RTP1YMR185W VTS1Q08831 523 aaKnown RBP RIP-Chip data1.8□□□□□ -2.12not detected
RTP1YMR185W VPS54Q12071 889 aa1.8□□□□□ -2.12
RTP1YMR185W MED11Q99278 115 aa1.8□□□□□ -2.12
RTP1YMR185W VCX1Q99385 411 aa1.8□□□□□ -2.12
RTP1YMR185W GAL10P04397 699 aa1.8□□□□□ -2.12
RTP1YMR185W BCY1P07278 416 aaKnown RBP1.8□□□□□ -2.12
RTP1YMR185W CIT2P08679 460 aa1.8□□□□□ -2.12
RTP1YMR185W THR1P17423 357 aaKnown RBP1.8□□□□□ -2.12
RTP1YMR185W PMA2P19657 947 aa1.8□□□□□ -2.12
RTP1YMR185W KGD1P20967 1014 aaKnown RBP1.8□□□□□ -2.12
RTP1YMR185W UBA1P22515 1024 aaKnown RBP1.8□□□□□ -2.12
RTP1YMR185W DBR1P24309 405 aaKnown RBP1.8□□□□□ -2.12
RTP1YMR185W HCM1P25364 564 aa1.8□□□□□ -2.12
RTP1YMR185W BRF1P29056 596 aa1.8□□□□□ -2.12
RTP1YMR185W PTP2P29461 750 aa1.8□□□□□ -2.12
RTP1YMR185W CYS4P32582 507 aaKnown RBP1.8□□□□□ -2.12
RTP1YMR185W GDH2P33327 1092 aaKnown RBP1.8□□□□□ -2.12
RTP1YMR185W YKL100CP34248 587 aa1.8□□□□□ -2.12
RTP1YMR185W PEX5P35056 612 aa1.8□□□□□ -2.12
RTP1YMR185W RRN3P36070 627 aa1.8□□□□□ -2.12
RTP1YMR185W YBR138CP38277 524 aa1.8□□□□□ -2.12
RTP1YMR185W YBP1P38315 674 aa1.8□□□□□ -2.12
RTP1YMR185W ERC1P38767 581 aa1.8□□□□□ -2.12
RTP1YMR185W YHR054CP38780 354 aa1.8□□□□□ -2.12
RTP1YMR185W AST2P39945 430 aaKnown RBP1.8□□□□□ -2.12
RTP1YMR185W ECM10P39987 644 aa1.8□□□□□ -2.12
RTP1YMR185W THO1P40040 218 aaKnown RBP1.8□□□□□ -2.12
RTP1YMR185W SER3P40054 469 aa1.8□□□□□ -2.12
RTP1YMR185W AVT6P40074 448 aa1.8□□□□□ -2.12
RTP1YMR185W IMA5P40884 581 aa1.8□□□□□ -2.12
RTP1YMR185W GCD14P46959 383 aaPredicted RBP1.8□□□□□ -2.12
RTP1YMR185W ALY2P47029 1046 aa1.8□□□□□ -2.12
RTP1YMR185W ASN2P49090 572 aaKnown RBP1.8□□□□□ -2.12
RTP1YMR185W HNT2P49775 206 aa1.8□□□□□ -2.12
RTP1YMR185W MRK1P50873 501 aa1.8□□□□□ -2.12
RTP1YMR185W VPS9P54787 451 aa1.8□□□□□ -2.12
RTP1YMR185W MAP1Q01662 387 aaKnown RBP RIP-Chip data1.8□□□□□ -2.12not detected
RTP1YMR185W NAN1Q02931 896 aaKnown RBP1.8□□□□□ -2.12
RTP1YMR185W RCF1Q03713 159 aa1.8□□□□□ -2.12
RTP1YMR185W RKM2Q03942 479 aa1.8□□□□□ -2.12
RTP1YMR185W SND1Q04007 877 aa1.8□□□□□ -2.12
RTP1YMR185W YET2Q04210 160 aa1.8□□□□□ -2.12
RTP1YMR185W ENT2Q05785 613 aa1.8□□□□□ -2.12
RTP1YMR185W FMP45Q07651 309 aa1.8□□□□□ -2.12
RTP1YMR185W TPO1Q07824 586 aa1.8□□□□□ -2.12
RTP1YMR185W DIS3Q08162 1001 aaKnown RBP1.8□□□□□ -2.12
RTP1YMR185W AAD15Q08361 143 aa1.8□□□□□ -2.12
RTP1YMR185W RPN8Q08723 338 aaKnown RBP1.8□□□□□ -2.12
RTP1YMR185W UIP4Q08926 304 aa1.8□□□□□ -2.12
RTP1YMR185W RSA1Q08932 381 aa1.8□□□□□ -2.12
RTP1YMR185W HFI1Q12060 488 aa1.8□□□□□ -2.12
RTP1YMR185W SPE3Q12074 293 aaKnown RBP1.8□□□□□ -2.12
RTP1YMR185W PSY3Q12318 242 aa1.8□□□□□ -2.12
RTP1YMR185W EMP46Q12396 444 aa1.8□□□□□ -2.12
RTP1YMR185W MF(ALPHA)1P01149 165 aa1.8□□□□□ -2.12
RTP1YMR185W ASP3-2P0CX77 362 aa1.8□□□□□ -2.12
RTP1YMR185W ASP3-3P0CX78 362 aa1.8□□□□□ -2.12
RTP1YMR185W ASP3-4P0CX79 362 aa1.8□□□□□ -2.12
RTP1YMR185W ASP3-1P0CZ17 362 aa1.8□□□□□ -2.12
RTP1YMR185W TOP3P13099 656 aa1.8□□□□□ -2.12
RTP1YMR185W MEF1P25039 761 aa1.8□□□□□ -2.12
RTP1YMR185W CCR4P31384 837 aaKnown RBP1.8□□□□□ -2.12
RTP1YMR185W FRE1P32791 686 aa1.8□□□□□ -2.12
RTP1YMR185W PEX2P32800 271 aa1.8□□□□□ -2.12
RTP1YMR185W CLG1P35190 452 aa1.8□□□□□ -2.12
RTP1YMR185W MTG2P38860 518 aa1.8□□□□□ -2.12
RTP1YMR185W SEC31P38968 1273 aaKnown RBP1.8□□□□□ -2.12
RTP1YMR185W HXT6P39003 570 aaKnown RBP1.8□□□□□ -2.12
RTP1YMR185W HXT7P39004 570 aa1.8□□□□□ -2.12
RTP1YMR185W PIK1P39104 1066 aa1.8□□□□□ -2.12
RTP1YMR185W FHL1P39521 936 aa1.8□□□□□ -2.12
RTP1YMR185W SOP4P39543 234 aaPredicted RBP1.8□□□□□ -2.12
RTP1YMR185W YAT2P40017 923 aa1.8□□□□□ -2.12
RTP1YMR185W YEN1P40028 759 aa1.8□□□□□ -2.12
RTP1YMR185W FCY21P40039 528 aa1.8□□□□□ -2.12
RTP1YMR185W YJR061WP40355 935 aa1.8□□□□□ -2.12
RTP1YMR185W GSM1P42950 618 aa1.8□□□□□ -2.12
RTP1YMR185W LYS4P49367 693 aaPredicted RBP1.8□□□□□ -2.12
RTP1YMR185W PEX31P53203 462 aa1.8□□□□□ -2.12
RTP1YMR185W PBP1P53297 722 aaKnown RBP1.8□□□□□ -2.12
RTP1YMR185W TEP1P53916 434 aa1.8□□□□□ -2.12
RTP1YMR185W TLG1Q03322 224 aa1.8□□□□□ -2.12
RTP1YMR185W YMR209CQ03648 457 aa1.8□□□□□ -2.12
RTP1YMR185W GIS1Q03833 894 aa1.8□□□□□ -2.12
RTP1YMR185W GRX8Q05926 109 aa1.8□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 28.1 ms