RNA–Protein interactions for RNA: YLR417W

VPS36, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene VPS36, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS36YLR417W DBP8P38719 431 aa5.06□□□□□ -1.6
VPS36YLR417W SSU1P41930 458 aa5.06□□□□□ -1.6
VPS36YLR417W HXT14P42833 540 aa5.06□□□□□ -1.6
VPS36YLR417W YJL107CP42947 387 aa5.06□□□□□ -1.6
VPS36YLR417W RCF1Q03713 159 aa5.06□□□□□ -1.6
VPS36YLR417W EMI2Q04409 500 aaKnown RBP5.06□□□□□ -1.6
VPS36YLR417W YER145C-AA0A023PYF4 145 aa5.05□□□□□ -1.6
VPS36YLR417W REC107P21651 314 aa5.05□□□□□ -1.6
VPS36YLR417W PXL1P36166 706 aa5.05□□□□□ -1.6
VPS36YLR417W BPL1P48445 690 aaPredicted RBP5.05□□□□□ -1.6
VPS36YLR417W VPS9P54787 451 aa5.05□□□□□ -1.6
VPS36YLR417W ARG81P05085 880 aa5.04□□□□□ -1.6
VPS36YLR417W CLC1P17891 233 aa5.04□□□□□ -1.6
VPS36YLR417W YCR051WP25631 222 aa5.04□□□□□ -1.6
VPS36YLR417W SWI3P32591 825 aa5.04□□□□□ -1.6
VPS36YLR417W YKL100CP34248 587 aa5.04□□□□□ -1.6
VPS36YLR417W MIA40P36046 403 aa5.04□□□□□ -1.6
VPS36YLR417W LTP1P40347 161 aa5.04□□□□□ -1.6
VPS36YLR417W EAF7P53911 425 aaKnown RBP5.04□□□□□ -1.6
VPS36YLR417W YLR345WQ06137 509 aa5.04□□□□□ -1.6
VPS36YLR417W CDC45Q08032 650 aa5.04□□□□□ -1.6
VPS36YLR417W PPZ2P33329 710 aa5.03□□□□□ -1.6
VPS36YLR417W GCS1P35197 352 aa5.03□□□□□ -1.6
VPS36YLR417W STB6P36085 766 aa5.03□□□□□ -1.6
VPS36YLR417W MSR1P38714 643 aa5.03□□□□□ -1.6
VPS36YLR417W CIN4P39110 191 aa5.03□□□□□ -1.6
VPS36YLR417W IRC7P43623 340 aa5.03□□□□□ -1.6
VPS36YLR417W STB2P46679 850 aa5.03□□□□□ -1.6
VPS36YLR417W SGF73P53165 657 aa5.03□□□□□ -1.6
VPS36YLR417W YTP1P53584 459 aa5.03□□□□□ -1.6
VPS36YLR417W ASI1P54074 624 aa5.03□□□□□ -1.6
VPS36YLR417W SWF1Q04629 336 aa5.03□□□□□ -1.6
VPS36YLR417W VTA1Q06263 330 aa5.03□□□□□ -1.6
VPS36YLR417W ECM30Q06673 1274 aa5.03□□□□□ -1.6
VPS36YLR417W IRC3Q06683 689 aa5.03□□□□□ -1.6
VPS36YLR417W PAP1P29468 568 aaKnown RBP5.03□□□□□ -1.6
VPS36YLR417W YME1P32795 747 aa5.03□□□□□ -1.6
VPS36YLR417W RPL32P38061 130 aaKnown RBP5.03□□□□□ -1.6
VPS36YLR417W ANS1P38832 159 aa5.03□□□□□ -1.6
VPS36YLR417W DLD2P46681 530 aaKnown RBP5.03□□□□□ -1.6
VPS36YLR417W LYS20P48570 428 aaKnown RBP5.03□□□□□ -1.6
VPS36YLR417W UBP8P50102 471 aa5.03□□□□□ -1.6
VPS36YLR417W ATP23P53722 227 aa5.03□□□□□ -1.6
VPS36YLR417W RPA49Q01080 415 aaPredicted RBP5.03□□□□□ -1.6
VPS36YLR417W ERB1Q04660 807 aaKnown RBP5.03□□□□□ -1.6
VPS36YLR417W YDL007C-AQ2V2Q0 85 aa5.03□□□□□ -1.6
VPS36YLR417W YRF1-4O13559 1382 aa5.02□□□□□ -1.61
VPS36YLR417W PMS1P14242 873 aa5.02□□□□□ -1.61
VPS36YLR417W GAC1P28006 793 aa5.02□□□□□ -1.61
VPS36YLR417W CIK1Q01649 594 aa5.02□□□□□ -1.61
VPS36YLR417W MSC1Q03104 513 aa5.02□□□□□ -1.61
VPS36YLR417W RPS10AQ08745 105 aaPredicted RBP5.02□□□□□ -1.61
VPS36YLR417W CHD1P32657 1468 aa5.02□□□□□ -1.61
VPS36YLR417W PUT2P07275 575 aa5.01□□□□□ -1.61
VPS36YLR417W TUB1P09733 447 aaKnown RBP5.01□□□□□ -1.61
VPS36YLR417W RFC1P38630 861 aaKnown RBP5.01□□□□□ -1.61
VPS36YLR417W ARP1P38696 384 aa5.01□□□□□ -1.61
VPS36YLR417W OGG1P53397 376 aaPredicted RBP5.01□□□□□ -1.61
VPS36YLR417W BNI5P53890 448 aaKnown RBP5.01□□□□□ -1.61
VPS36YLR417W RSM23Q01163 450 aa5.01□□□□□ -1.61
VPS36YLR417W ERO1Q03103 563 aa5.01□□□□□ -1.61
VPS36YLR417W ATG26Q06321 1198 aa5.01□□□□□ -1.61
VPS36YLR417W FRE3Q08905 711 aa5.01□□□□□ -1.61
VPS36YLR417W NUP1P20676 1076 aa5□□□□□ -1.61
VPS36YLR417W BUD14P27637 709 aa5□□□□□ -1.61
VPS36YLR417W MTR2P34232 184 aaKnown RBP5□□□□□ -1.61
VPS36YLR417W RIX1P38883 763 aaPredicted RBP5□□□□□ -1.61
VPS36YLR417W VPS41P38959 992 aa5□□□□□ -1.61
VPS36YLR417W RPS10BP46784 105 aaKnown RBP5□□□□□ -1.61
VPS36YLR417W PDS5Q04264 1277 aa5□□□□□ -1.61
VPS36YLR417W ADE13Q05911 482 aaKnown RBP5□□□□□ -1.61
VPS36YLR417W OSW1Q08692 278 aa5□□□□□ -1.61
VPS36YLR417W URE2P23202 354 aaKnown RBP5□□□□□ -1.61
VPS36YLR417W CLB1P24868 471 aa5□□□□□ -1.61
VPS36YLR417W TOF2Q02208 771 aa5□□□□□ -1.61
VPS36YLR417W ARX1Q03862 593 aaKnown RBP5□□□□□ -1.61
VPS36YLR417W ROY1Q04847 553 aa5□□□□□ -1.61
VPS36YLR417W RBS1Q05672 457 aaKnown RBP5□□□□□ -1.61
VPS36YLR417W ORM2Q06144 216 aa5□□□□□ -1.61
VPS36YLR417W YML133CQ03099 1374 aa5□□□□□ -1.61
VPS36YLR417W YLL067CQ07888 1374 aa5□□□□□ -1.61
VPS36YLR417W YLL066CQ99208 1374 aa5□□□□□ -1.61
VPS36YLR417W SUI2P20459 304 aaKnown RBP4.99□□□□□ -1.61
VPS36YLR417W OPI1P21957 404 aa4.99□□□□□ -1.61
VPS36YLR417W URA7P28274 579 aaKnown RBP4.99□□□□□ -1.61
VPS36YLR417W HCS1P34243 683 aa4.99□□□□□ -1.61
VPS36YLR417W UBA4P38820 440 aa4.99□□□□□ -1.61
VPS36YLR417W JEM1P40358 645 aa4.99□□□□□ -1.61
VPS36YLR417W NMD5P46970 1048 aa4.99□□□□□ -1.61
VPS36YLR417W MNP1P53163 194 aaPredicted RBP4.99□□□□□ -1.61
VPS36YLR417W ART5P53244 586 aaKnown RBP4.99□□□□□ -1.61
VPS36YLR417W COQ9Q05779 260 aa4.99□□□□□ -1.61
VPS36YLR417W ISN1Q99312 450 aa4.99□□□□□ -1.61
VPS36YLR417W RPL31BP0C2H9 113 aaKnown RBP4.98□□□□□ -1.61
VPS36YLR417W APE1P14904 514 aa4.98□□□□□ -1.61
VPS36YLR417W ELO2P25358 347 aa4.98□□□□□ -1.61
VPS36YLR417W COQ3P27680 312 aa4.98□□□□□ -1.61
VPS36YLR417W HXT3P32466 567 aaKnown RBP4.98□□□□□ -1.61
VPS36YLR417W FLO10P36170 1169 aa4.98□□□□□ -1.61
VPS36YLR417W APE3P37302 537 aaKnown RBP4.98□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms