RNA–Protein interactions for RNA: YLR192C

HCR1, Transcript of eIF3j component of translation initiation factor 3 (eIF3), yeast

Gene HCR1, Length 798 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HCR1	YLR192C	PRP16	P15938	1071 aa	Predicted RBP	5.77	□□□□□ -1.49
HCR1	YLR192C	SLY1	P22213	666 aa		5.77	□□□□□ -1.49
HCR1	YLR192C	PGS1	P25578	521 aa		5.77	□□□□□ -1.49
HCR1	YLR192C	MEI4	P29467	408 aa		5.77	□□□□□ -1.49
HCR1	YLR192C	DSS4	P32601	143 aa		5.77	□□□□□ -1.49
HCR1	YLR192C	FUI1	P38196	639 aa		5.77	□□□□□ -1.49
HCR1	YLR192C	PRM9	P39551	298 aa		5.77	□□□□□ -1.49
HCR1	YLR192C	HOS4	P40480	1083 aa		5.77	□□□□□ -1.49
HCR1	YLR192C	GUF1	P46943	645 aa		5.77	□□□□□ -1.49
HCR1	YLR192C	RFX1	P48743	811 aa		5.77	□□□□□ -1.49
HCR1	YLR192C	ARP4	P80428	489 aa		5.77	□□□□□ -1.49
HCR1	YLR192C	LEE1	Q02799	301 aa	Known RBP	5.77	□□□□□ -1.49
HCR1	YLR192C	PNG1	Q02890	363 aa		5.77	□□□□□ -1.49
HCR1	YLR192C	YML053C	Q04978	212 aa		5.77	□□□□□ -1.49
HCR1	YLR192C	FAR8	Q05040	523 aa		5.77	□□□□□ -1.49
HCR1	YLR192C	HRD3	Q05787	833 aa		5.77	□□□□□ -1.49
HCR1	YLR192C	VHS3	Q08438	674 aa		5.77	□□□□□ -1.49
HCR1	YLR192C	DDC1	Q08949	612 aa		5.77	□□□□□ -1.49
HCR1	YLR192C	YPL225W	Q08971	146 aa	Known RBP	5.77	□□□□□ -1.49
HCR1	YLR192C	HRT3	Q12347	344 aa		5.77	□□□□□ -1.49
HCR1	YLR192C	AVL9	Q12500	764 aa		5.77	□□□□□ -1.49
HCR1	YLR192C	IZH4	Q99393	312 aa		5.77	□□□□□ -1.49
HCR1	YLR192C	RAD10	P06838	210 aa		5.76	□□□□□ -1.49
HCR1	YLR192C	MAS1	P10507	462 aa		5.76	□□□□□ -1.49
HCR1	YLR192C	LAT1	P12695	482 aa	Known RBP	5.76	□□□□□ -1.49
HCR1	YLR192C	SRV2	P17555	526 aa	Known RBP	5.76	□□□□□ -1.49
HCR1	YLR192C	PUP3	P25451	205 aa	Known RBP	5.76	□□□□□ -1.49
HCR1	YLR192C	CCR4	P31384	837 aa	Known RBP	5.76	□□□□□ -1.49
HCR1	YLR192C	YHR112C	P38716	378 aa		5.76	□□□□□ -1.49
HCR1	YLR192C	AIM18	P38884	321 aa		5.76	□□□□□ -1.49
HCR1	YLR192C	MRX1	P40050	688 aa		5.76	□□□□□ -1.49
HCR1	YLR192C	KHA1	P40309	873 aa		5.76	□□□□□ -1.49
HCR1	YLR192C	BTT1	P40314	149 aa	Predicted RBP	5.76	□□□□□ -1.49
HCR1	YLR192C	CDC1	P40986	491 aa		5.76	□□□□□ -1.49
HCR1	YLR192C	ATG36	P46983	293 aa		5.76	□□□□□ -1.49
HCR1	YLR192C	MNN11	P46985	422 aa	Known RBP	5.76	□□□□□ -1.49
HCR1	YLR192C	COP1	P53622	1201 aa	Known RBP	5.76	□□□□□ -1.49
HCR1	YLR192C	COG6	P53959	839 aa		5.76	□□□□□ -1.49
HCR1	YLR192C	MTD1	Q02046	320 aa	Known RBP	5.76	□□□□□ -1.49
HCR1	YLR192C	YMR027W	Q04371	470 aa		5.76	□□□□□ -1.49
HCR1	YLR192C	ECM22	Q05958	814 aa	Predicted RBP	5.76	□□□□□ -1.49
HCR1	YLR192C	AAD4	Q07747	329 aa		5.76	□□□□□ -1.49
HCR1	YLR192C	IRC13	Q08630	104 aa		5.76	□□□□□ -1.49
HCR1	YLR192C	FAP7	Q12055	197 aa	Predicted RBP	5.76	□□□□□ -1.49
HCR1	YLR192C	MOT1	P32333	1867 aa		5.76	□□□□□ -1.49
HCR1	YLR192C	MTF1	P14908	341 aa	Known RBP	5.75	□□□□□ -1.49
HCR1	YLR192C	RAD5	P32849	1169 aa	Predicted RBP	5.75	□□□□□ -1.49
HCR1	YLR192C	GCS1	P35197	352 aa		5.75	□□□□□ -1.49
HCR1	YLR192C	MOH1	P38191	138 aa		5.75	□□□□□ -1.49
HCR1	YLR192C	DIA4	P38705	446 aa	Predicted RBP	5.75	□□□□□ -1.49
HCR1	YLR192C	YPT35	P38815	214 aa	Known RBP	5.75	□□□□□ -1.49
HCR1	YLR192C	ECM1	P39715	212 aa		5.75	□□□□□ -1.49
HCR1	YLR192C	FLC2	P39719	783 aa		5.75	□□□□□ -1.49
HCR1	YLR192C	AVT2	P39981	480 aa		5.75	□□□□□ -1.49
HCR1	YLR192C	YJL163C	P46996	555 aa		5.75	□□□□□ -1.49
HCR1	YLR192C	YJL132W	P47014	750 aa		5.75	□□□□□ -1.49
HCR1	YLR192C	YPR003C	P53394	754 aa		5.75	□□□□□ -1.49
HCR1	YLR192C	ARG5,6	Q01217	863 aa		5.75	□□□□□ -1.49
HCR1	YLR192C	ELP3	Q02908	557 aa	Known RBP	5.75	□□□□□ -1.49
HCR1	YLR192C	YLL056C	Q12177	298 aa		5.75	□□□□□ -1.49
HCR1	YLR192C	GPM3	Q12326	303 aa		5.75	□□□□□ -1.49
HCR1	YLR192C	ARP7	Q12406	477 aa		5.75	□□□□□ -1.49
HCR1	YLR192C	ILV2	P07342	687 aa	Known RBP	5.74	□□□□□ -1.49
HCR1	YLR192C	CBF1	P17106	351 aa		5.74	□□□□□ -1.49
HCR1	YLR192C	ERG6	P25087	383 aa	Known RBP	5.74	□□□□□ -1.49
HCR1	YLR192C	NIP1	P32497	812 aa	Known RBP	5.74	□□□□□ -1.49
HCR1	YLR192C	OAR1	P35731	278 aa		5.74	□□□□□ -1.49
HCR1	YLR192C	ECM13	P38195	257 aa		5.74	□□□□□ -1.49
HCR1	YLR192C	HEK2	P38199	381 aa	Known RBP RIP-Chip data	5.74	□□□□□ -1.49	not detected
HCR1	YLR192C	YBR225W	P38321	900 aa		5.74	□□□□□ -1.49
HCR1	YLR192C	FSH1	P38777	243 aa	Known RBP	5.74	□□□□□ -1.49
HCR1	YLR192C	REV7	P38927	245 aa		5.74	□□□□□ -1.49
HCR1	YLR192C	DOT6	P40059	670 aa	Known RBP	5.74	□□□□□ -1.49
HCR1	YLR192C	BAP3	P41815	604 aa		5.74	□□□□□ -1.49
HCR1	YLR192C	TDA10	P42938	290 aa		5.74	□□□□□ -1.49
HCR1	YLR192C	SAE2	P46946	345 aa		5.74	□□□□□ -1.49
HCR1	YLR192C	PSP1	P50896	841 aa	Known RBP	5.74	□□□□□ -1.49
HCR1	YLR192C	PCL10	P53124	433 aa		5.74	□□□□□ -1.49
HCR1	YLR192C	KTR5	P53966	522 aa	Predicted RBP	5.74	□□□□□ -1.49
HCR1	YLR192C	KTR6	P54070	446 aa		5.74	□□□□□ -1.49
HCR1	YLR192C	VPS9	P54787	451 aa		5.74	□□□□□ -1.49
HCR1	YLR192C	SPG3	Q04398	127 aa	Predicted RBP	5.74	□□□□□ -1.49
HCR1	YLR192C	SPC24	Q04477	213 aa		5.74	□□□□□ -1.49
HCR1	YLR192C	CMS1	Q07897	291 aa	Known RBP	5.74	□□□□□ -1.49
HCR1	YLR192C	LCB4	Q12246	624 aa		5.74	□□□□□ -1.49
HCR1	YLR192C	CMD1	P06787	147 aa	Known RBP	5.73	□□□□□ -1.49
HCR1	YLR192C	IMA3	P0CW40	589 aa		5.73	□□□□□ -1.49
HCR1	YLR192C	IMA4	P0CW41	589 aa		5.73	□□□□□ -1.49
HCR1	YLR192C	RNA1	P11745	407 aa	Known RBP	5.73	□□□□□ -1.49
HCR1	YLR192C	HMG2	P12684	1045 aa		5.73	□□□□□ -1.49
HCR1	YLR192C	HEM15	P16622	393 aa		5.73	□□□□□ -1.49
HCR1	YLR192C	YIH1	P25637	258 aa		5.73	□□□□□ -1.49
HCR1	YLR192C	MGT1	P26188	188 aa		5.73	□□□□□ -1.49
HCR1	YLR192C	MRE11	P32829	692 aa		5.73	□□□□□ -1.49
HCR1	YLR192C	SET3	P36124	751 aa		5.73	□□□□□ -1.49
HCR1	YLR192C	MED8	P38304	223 aa		5.73	□□□□□ -1.49
HCR1	YLR192C	MSR1	P38714	643 aa		5.73	□□□□□ -1.49
HCR1	YLR192C	RIM4	P38741	713 aa		5.73	□□□□□ -1.49
HCR1	YLR192C	SPC97	P38863	823 aa		5.73	□□□□□ -1.49
HCR1	YLR192C	CKB2	P38930	258 aa		5.73	□□□□□ -1.49

Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms