RNA–Protein interactions for RNA: YLR097C

HRT3, Transcript of Putative SCF-ubiquitin ligase F-box protein, yeast

Gene HRT3, Length 1,035 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HRT3	YLR097C	ADE13	Q05911	482 aa	Known RBP	4.59	□□□□□ -1.67
HRT3	YLR097C	YDL218W	Q07629	317 aa		4.59	□□□□□ -1.67
HRT3	YLR097C	RTT109	Q07794	436 aa		4.59	□□□□□ -1.67
HRT3	YLR097C	BUD7	Q08754	746 aa		4.59	□□□□□ -1.67
HRT3	YLR097C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	not detected
HRT3	YLR097C	RGT2	Q12300	763 aa		4.59	□□□□□ -1.67
HRT3	YLR097C	CDC31	P06704	161 aa	Known RBP	4.58	□□□□□ -1.68
HRT3	YLR097C	PUT2	P07275	575 aa		4.58	□□□□□ -1.68
HRT3	YLR097C	EST1	P17214	699 aa	Predicted RBP	4.58	□□□□□ -1.68
HRT3	YLR097C	BUD5	P25300	642 aa	Predicted RBP	4.58	□□□□□ -1.68
HRT3	YLR097C	SYN8	P31377	255 aa		4.58	□□□□□ -1.68
HRT3	YLR097C	SEF1	P34228	1148 aa		4.58	□□□□□ -1.68
HRT3	YLR097C	UBP11	P36026	717 aa		4.58	□□□□□ -1.68
HRT3	YLR097C	GND1	P38720	489 aa	Known RBP	4.58	□□□□□ -1.68
HRT3	YLR097C	UBA4	P38820	440 aa		4.58	□□□□□ -1.68
HRT3	YLR097C	APT1	P49435	187 aa	Known RBP	4.58	□□□□□ -1.68
HRT3	YLR097C	YNL181W	P53878	407 aa		4.58	□□□□□ -1.68
HRT3	YLR097C	BOP3	P53958	396 aa		4.58	□□□□□ -1.68
HRT3	YLR097C	RPS10A	Q08745	105 aa	Predicted RBP	4.58	□□□□□ -1.68
HRT3	YLR097C	YPT1	P01123	206 aa	Known RBP	4.57	□□□□□ -1.68
HRT3	YLR097C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
HRT3	YLR097C	RPL42A	P0CX27	106 aa	Known RBP	4.57	□□□□□ -1.68
HRT3	YLR097C	RPL42B	P0CX28	106 aa	Known RBP	4.57	□□□□□ -1.68
HRT3	YLR097C	SNF3	P10870	884 aa		4.57	□□□□□ -1.68
HRT3	YLR097C	YKL100C	P34248	587 aa		4.57	□□□□□ -1.68
HRT3	YLR097C	NUP133	P36161	1157 aa		4.57	□□□□□ -1.68
HRT3	YLR097C	PHO90	P39535	881 aa		4.57	□□□□□ -1.68
HRT3	YLR097C	PCL6	P40038	420 aa		4.57	□□□□□ -1.68
HRT3	YLR097C	ALG5	P40350	334 aa		4.57	□□□□□ -1.68
HRT3	YLR097C	GAT1	P43574	510 aa		4.57	□□□□□ -1.68
HRT3	YLR097C	IRC6	P43615	237 aa		4.57	□□□□□ -1.68
HRT3	YLR097C	VPS38	Q05919	439 aa		4.57	□□□□□ -1.68
HRT3	YLR097C	GEP3	Q08622	556 aa		4.57	□□□□□ -1.68
HRT3	YLR097C	RDR1	Q08904	546 aa		4.57	□□□□□ -1.68
HRT3	YLR097C	ARG3	P05150	338 aa		4.56	□□□□□ -1.68
HRT3	YLR097C	ART10	P18634	518 aa	Known RBP	4.56	□□□□□ -1.68
HRT3	YLR097C	TIF3	P34167	436 aa	Known RBP	4.56	□□□□□ -1.68
HRT3	YLR097C	RPL32	P38061	130 aa	Known RBP	4.56	□□□□□ -1.68
HRT3	YLR097C	YPK3	P38070	525 aa		4.56	□□□□□ -1.68
HRT3	YLR097C	SRO77	P38163	1010 aa		4.56	□□□□□ -1.68
HRT3	YLR097C	UTP9	P38882	575 aa	Known RBP	4.56	□□□□□ -1.68
HRT3	YLR097C	SPO22	P40511	975 aa		4.56	□□□□□ -1.68
HRT3	YLR097C	MAF1	P41910	395 aa		4.56	□□□□□ -1.68
HRT3	YLR097C	RPS10B	P46784	105 aa	Known RBP	4.56	□□□□□ -1.68
HRT3	YLR097C	SRB7	P47822	140 aa		4.56	□□□□□ -1.68
HRT3	YLR097C	MRPL19	P53875	158 aa		4.56	□□□□□ -1.68
HRT3	YLR097C	IPI3	P53877	555 aa		4.56	□□□□□ -1.68
HRT3	YLR097C	CDC45	Q08032	650 aa		4.56	□□□□□ -1.68
HRT3	YLR097C	AVL9	Q12500	764 aa		4.56	□□□□□ -1.68
HRT3	YLR097C	MRP13	P12686	339 aa		4.55	□□□□□ -1.68
HRT3	YLR097C	TCD2	P36101	447 aa	Known RBP	4.55	□□□□□ -1.68
HRT3	YLR097C	ROT2	P38138	954 aa		4.55	□□□□□ -1.68
HRT3	YLR097C	CIN4	P39110	191 aa		4.55	□□□□□ -1.68
HRT3	YLR097C	NOC2	P39744	710 aa	Known RBP	4.55	□□□□□ -1.68
HRT3	YLR097C	IAH1	P41734	238 aa		4.55	□□□□□ -1.68
HRT3	YLR097C	PYK2	P52489	506 aa	Known RBP	4.55	□□□□□ -1.68
HRT3	YLR097C	HOS2	P53096	452 aa	Predicted RBP	4.55	□□□□□ -1.68
HRT3	YLR097C	SOL4	P53315	255 aa		4.55	□□□□□ -1.68
HRT3	YLR097C	SEC5	P89102	971 aa		4.55	□□□□□ -1.68
HRT3	YLR097C	EKI1	Q03764	534 aa		4.55	□□□□□ -1.68
HRT3	YLR097C	MLH2	Q07980	695 aa		4.55	□□□□□ -1.68
HRT3	YLR097C	DSE3	Q08729	430 aa		4.55	□□□□□ -1.68
HRT3	YLR097C	SGS1	P35187	1447 aa		4.55	□□□□□ -1.68
HRT3	YLR097C	FOB1	O13329	566 aa		4.54	□□□□□ -1.68
HRT3	YLR097C	PDA1	P16387	420 aa	Known RBP	4.54	□□□□□ -1.68
HRT3	YLR097C	SUI2	P20459	304 aa	Known RBP	4.54	□□□□□ -1.68
HRT3	YLR097C	GID7	P25569	745 aa		4.54	□□□□□ -1.68
HRT3	YLR097C	PDR3	P33200	976 aa		4.54	□□□□□ -1.68
HRT3	YLR097C	MTR2	P34232	184 aa	Known RBP	4.54	□□□□□ -1.68
HRT3	YLR097C	SGN1	P40561	250 aa	Known RBP RIP-Chip data	4.54	□□□□□ -1.68	not detected
HRT3	YLR097C	IMD4	P50094	524 aa	Known RBP	4.54	□□□□□ -1.68
HRT3	YLR097C	PKP2	P53170	491 aa		4.54	□□□□□ -1.68
HRT3	YLR097C	ESBP6	P53918	673 aa		4.54	□□□□□ -1.68
HRT3	YLR097C	FIN1	Q03898	291 aa		4.54	□□□□□ -1.68
HRT3	YLR097C	GAL80	P04387	435 aa		4.53	□□□□□ -1.68
HRT3	YLR097C	SNC1	P31109	117 aa		4.53	□□□□□ -1.68
HRT3	YLR097C	ATO2	P32907	282 aa		4.53	□□□□□ -1.68
HRT3	YLR097C	LAG1	P38703	411 aa		4.53	□□□□□ -1.68
HRT3	YLR097C	YIL152W	P40455	235 aa		4.53	□□□□□ -1.68
HRT3	YLR097C	DOT5	P40553	215 aa		4.53	□□□□□ -1.68
HRT3	YLR097C	MET28	P40573	187 aa		4.53	□□□□□ -1.68
HRT3	YLR097C	RTS2	P40962	232 aa		4.53	□□□□□ -1.68
HRT3	YLR097C	YGR126W	P53274	230 aa		4.53	□□□□□ -1.68
HRT3	YLR097C	DUG3	P53871	357 aa		4.53	□□□□□ -1.68
HRT3	YLR097C	NUP100	Q02629	959 aa		4.53	□□□□□ -1.68
HRT3	YLR097C	MSC1	Q03104	513 aa		4.53	□□□□□ -1.68
HRT3	YLR097C	YMR160W	Q03823	816 aa		4.53	□□□□□ -1.68
HRT3	YLR097C	RLM1	Q12224	676 aa		4.53	□□□□□ -1.68
HRT3	YLR097C	ICT1	Q12385	394 aa		4.53	□□□□□ -1.68
HRT3	YLR097C	YFL068W	P0CX99	160 aa		4.52	□□□□□ -1.69
HRT3	YLR097C	YLL066W-A	P0CY00	160 aa		4.52	□□□□□ -1.69
HRT3	YLR097C	YLL067W-A	P0CY01	160 aa		4.52	□□□□□ -1.69
HRT3	YLR097C	CKA1	P15790	372 aa		4.52	□□□□□ -1.69
HRT3	YLR097C	TMT1	P32643	299 aa		4.52	□□□□□ -1.69
HRT3	YLR097C	YEL057C	P39983	233 aa		4.52	□□□□□ -1.69
HRT3	YLR097C	SMM1	P53720	384 aa	Known RBP	4.52	□□□□□ -1.69
HRT3	YLR097C	MPS1	P54199	764 aa		4.52	□□□□□ -1.69
HRT3	YLR097C	YMR254C	Q04838	102 aa		4.52	□□□□□ -1.69
HRT3	YLR097C	RSF1	Q05043	376 aa		4.52	□□□□□ -1.69
HRT3	YLR097C	SSK1	Q07084	712 aa		4.52	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 73.1 ms