RNA–Protein interactions for RNA: YKL213C

DOA1, Transcript of WD repeat protein required for ubiquitin-mediated protein degradation, yeast

Gene DOA1, Length 2,148 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOA1	YKL213C	YPR084W	Q06821	456 aa		4.88	□□□□□ -1.63
DOA1	YKL213C	NDD1	Q08887	554 aa		4.88	□□□□□ -1.63
DOA1	YKL213C	OCA6	Q12454	224 aa		4.88	□□□□□ -1.63
DOA1	YKL213C	TMA17	Q12513	150 aa		4.88	□□□□□ -1.63
DOA1	YKL213C	HTZ1	Q12692	134 aa	Known RBP	4.88	□□□□□ -1.63
DOA1	YKL213C	COX5A	P00424	153 aa		4.88	□□□□□ -1.63
DOA1	YKL213C	ARD1	P07347	238 aa	Predicted RBP	4.88	□□□□□ -1.63
DOA1	YKL213C	ERR1	P0CX10	437 aa		4.88	□□□□□ -1.63
DOA1	YKL213C	ERR2	P0CX11	437 aa		4.88	□□□□□ -1.63
DOA1	YKL213C	ARF2	P19146	181 aa	Known RBP	4.88	□□□□□ -1.63
DOA1	YKL213C	PMI40	P29952	429 aa	Known RBP	4.88	□□□□□ -1.63
DOA1	YKL213C	MGM101	P32787	269 aa	Known RBP	4.88	□□□□□ -1.63
DOA1	YKL213C	KES1	P35844	434 aa	Known RBP	4.88	□□□□□ -1.63
DOA1	YKL213C	COS111	P38308	924 aa		4.88	□□□□□ -1.63
DOA1	YKL213C	VMA22	P38784	181 aa		4.88	□□□□□ -1.63
DOA1	YKL213C	RCY1	P39531	840 aa		4.88	□□□□□ -1.63
DOA1	YKL213C	HEM14	P40012	539 aa		4.88	□□□□□ -1.63
DOA1	YKL213C	YER137C	P40083	148 aa	Known RBP	4.88	□□□□□ -1.63
DOA1	YKL213C	JLP2	P40206	208 aa		4.88	□□□□□ -1.63
DOA1	YKL213C	ARF3	P40994	183 aa	RIP-Chip data	4.88	□□□□□ -1.63	not detected
DOA1	YKL213C	GPP1	P41277	250 aa	Known RBP	4.88	□□□□□ -1.63
DOA1	YKL213C	ERR3	P42222	437 aa		4.88	□□□□□ -1.63
DOA1	YKL213C	CCT7	P42943	550 aa	Known RBP	4.88	□□□□□ -1.63
DOA1	YKL213C	CPR6	P53691	371 aa	Known RBP	4.88	□□□□□ -1.63
DOA1	YKL213C	MGR3	Q04472	501 aa		4.88	□□□□□ -1.63
DOA1	YKL213C	SPC24	Q04477	213 aa		4.88	□□□□□ -1.63
DOA1	YKL213C	MFB1	Q04922	465 aa		4.88	□□□□□ -1.63
DOA1	YKL213C	YML053C	Q04978	212 aa		4.88	□□□□□ -1.63
DOA1	YKL213C	YPD1	Q07688	167 aa		4.88	□□□□□ -1.63
DOA1	YKL213C	SRN2	Q99176	213 aa		4.88	□□□□□ -1.63
DOA1	YKL213C	ENO1	P00924	437 aa	Known RBP	4.87	□□□□□ -1.63
DOA1	YKL213C	NMT1	P14743	455 aa		4.87	□□□□□ -1.63
DOA1	YKL213C	YPK2	P18961	677 aa		4.87	□□□□□ -1.63
DOA1	YKL213C	KIN3	P22209	435 aa		4.87	□□□□□ -1.63
DOA1	YKL213C	SPS22	P25380	463 aa		4.87	□□□□□ -1.63
DOA1	YKL213C	CDC20	P26309	610 aa		4.87	□□□□□ -1.63
DOA1	YKL213C	URA7	P28274	579 aa	Known RBP	4.87	□□□□□ -1.63
DOA1	YKL213C	ITR2	P30606	609 aa		4.87	□□□□□ -1.63
DOA1	YKL213C	SMI1	P32566	505 aa		4.87	□□□□□ -1.63
DOA1	YKL213C	YME1	P32795	747 aa		4.87	□□□□□ -1.63
DOA1	YKL213C	APM3	P38153	483 aa		4.87	□□□□□ -1.63
DOA1	YKL213C	GDT1	P38301	280 aa	Predicted RBP	4.87	□□□□□ -1.63
DOA1	YKL213C	EXO1	P39875	702 aa		4.87	□□□□□ -1.63
DOA1	YKL213C	ELO3	P40319	345 aa		4.87	□□□□□ -1.63
DOA1	YKL213C	ERG10	P41338	398 aa	Known RBP	4.87	□□□□□ -1.63
DOA1	YKL213C	RNR4	P49723	345 aa	Known RBP	4.87	□□□□□ -1.63
DOA1	YKL213C	AMA1	P50082	593 aa		4.87	□□□□□ -1.63
DOA1	YKL213C	ATF2	P53296	535 aa		4.87	□□□□□ -1.63
DOA1	YKL213C	CAF120	P53836	1060 aa		4.87	□□□□□ -1.63
DOA1	YKL213C	SHR3	Q02774	210 aa		4.87	□□□□□ -1.63
DOA1	YKL213C	SLU7	Q02775	382 aa	Known RBP	4.87	□□□□□ -1.63
DOA1	YKL213C	KAP120	Q02932	1032 aa		4.87	□□□□□ -1.63
DOA1	YKL213C	ARP10	Q04549	284 aa		4.87	□□□□□ -1.63
DOA1	YKL213C	FRA1	Q07825	749 aa		4.87	□□□□□ -1.63
DOA1	YKL213C	PEX15	Q08215	383 aa		4.87	□□□□□ -1.63
DOA1	YKL213C	CUE5	Q08412	411 aa	Known RBP	4.87	□□□□□ -1.63
DOA1	YKL213C	FLC1	Q08967	793 aa		4.87	□□□□□ -1.63
DOA1	YKL213C	PIN2	Q12057	282 aa		4.87	□□□□□ -1.63
DOA1	YKL213C	HOS1	Q12214	470 aa		4.87	□□□□□ -1.63
DOA1	YKL213C	HAA1	Q12753	694 aa	Known RBP	4.87	□□□□□ -1.63
DOA1	YKL213C	LAG2	Q92325	660 aa		4.87	□□□□□ -1.63
DOA1	YKL213C	RAD1	P06777	1100 aa		4.87	□□□□□ -1.63
DOA1	YKL213C	ENA1	P13587	1091 aa		4.87	□□□□□ -1.63
DOA1	YKL213C	RSR1	P13856	272 aa		4.87	□□□□□ -1.63
DOA1	YKL213C	MSB1	P21339	1137 aa	Known RBP	4.87	□□□□□ -1.63
DOA1	YKL213C	DBF2	P22204	572 aa		4.87	□□□□□ -1.63
DOA1	YKL213C	HMX1	P32339	317 aa		4.87	□□□□□ -1.63
DOA1	YKL213C	MUD2	P36084	527 aa	Known RBP	4.87	□□□□□ -1.63
DOA1	YKL213C	MGE1	P38523	228 aa		4.87	□□□□□ -1.63
DOA1	YKL213C	STP2	P38704	541 aa		4.87	□□□□□ -1.63
DOA1	YKL213C	YHL041W	P38730	149 aa		4.87	□□□□□ -1.63
DOA1	YKL213C	ERP5	P38819	212 aa		4.87	□□□□□ -1.63
DOA1	YKL213C	DUN1	P39009	513 aa		4.87	□□□□□ -1.63
DOA1	YKL213C	SMX2	P40204	77 aa	Known RBP	4.87	□□□□□ -1.63
DOA1	YKL213C	RMD8	P43620	662 aa		4.87	□□□□□ -1.63
DOA1	YKL213C	CCT8	P47079	568 aa	Known RBP	4.87	□□□□□ -1.63
DOA1	YKL213C	LIA1	P47120	325 aa	Known RBP	4.87	□□□□□ -1.63
DOA1	YKL213C	YGR054W	P53235	642 aa	Known RBP	4.87	□□□□□ -1.63
DOA1	YKL213C	TIM13	P53299	105 aa		4.87	□□□□□ -1.63
DOA1	YKL213C	GND2	P53319	492 aa		4.87	□□□□□ -1.63
DOA1	YKL213C	MRPL50	P53724	139 aa		4.87	□□□□□ -1.63
DOA1	YKL213C	YNR065C	P53751	1116 aa		4.87	□□□□□ -1.63
DOA1	YKL213C	BSC5	P53755	489 aa		4.87	□□□□□ -1.63
DOA1	YKL213C	CWC24	P53769	259 aa		4.87	□□□□□ -1.63
DOA1	YKL213C	ENA2	Q01896	1091 aa		4.87	□□□□□ -1.63
DOA1	YKL213C	MET14	Q02196	202 aa		4.87	□□□□□ -1.63
DOA1	YKL213C	ABZ2	Q03266	374 aa		4.87	□□□□□ -1.63
DOA1	YKL213C	SHE9	Q04172	456 aa		4.87	□□□□□ -1.63
DOA1	YKL213C	GSF2	Q04697	403 aa	Known RBP	4.87	□□□□□ -1.63
DOA1	YKL213C	RTT103	Q05543	409 aa		4.87	□□□□□ -1.63
DOA1	YKL213C	GMC2	Q06201	188 aa		4.87	□□□□□ -1.63
DOA1	YKL213C	ATP16	Q12165	160 aa		4.87	□□□□□ -1.63
DOA1	YKL213C	YLR046C	Q12253	270 aa		4.87	□□□□□ -1.63
DOA1	YKL213C	ENA5	Q12691	1091 aa		4.87	□□□□□ -1.63
DOA1	YKL213C	YKL068W-A	Q3E826	78 aa		4.87	□□□□□ -1.63
DOA1	YKL213C	BEM2	P39960	2167 aa	Known RBP	4.86	□□□□□ -1.63
DOA1	YKL213C	REP1	P03871	373 aa		4.86	□□□□□ -1.63
DOA1	YKL213C	AAT2	P23542	418 aa	Known RBP	4.86	□□□□□ -1.63
DOA1	YKL213C	MIH1	P23748	554 aa		4.86	□□□□□ -1.63
DOA1	YKL213C	GID7	P25569	745 aa		4.86	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms