RNA–Protein interactions for RNA: YIL123W

SIM1, Transcript of Protein of the SUN family (Sim1p, Uth1p, Nca3p, Sun4p), yeastyeast

Gene SIM1, Length 1,431 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIM1YIL123W GLG2P47011 380 aa11.08□□□□□ -0.64
SIM1YIL123W TIS11P47977 285 aa11.08□□□□□ -0.64
SIM1YIL123W PRP38Q00723 242 aaPredicted RBP11.08□□□□□ -0.64
SIM1YIL123W HSP31Q04432 237 aa11.08□□□□□ -0.64
SIM1YIL123W CIA1Q05583 330 aa11.08□□□□□ -0.64
SIM1YIL123W BUD7Q08754 746 aa11.08□□□□□ -0.64
SIM1YIL123W MCD1Q12158 566 aa11.08□□□□□ -0.64
SIM1YIL123W TAF3Q12297 353 aa11.08□□□□□ -0.64
SIM1YIL123W GTT2Q12390 233 aa11.08□□□□□ -0.64
SIM1YIL123W GUK1P15454 187 aaKnown RBP11.07□□□□□ -0.64
SIM1YIL123W URA4P20051 364 aa11.07□□□□□ -0.64
SIM1YIL123W COQ8P27697 501 aa11.07□□□□□ -0.64
SIM1YIL123W DPH5P32469 300 aaPredicted RBP11.07□□□□□ -0.64
SIM1YIL123W SPS19P32573 292 aaKnown RBP11.07□□□□□ -0.64
SIM1YIL123W ERG10P41338 398 aaKnown RBP11.07□□□□□ -0.64
SIM1YIL123W GAT1P43574 510 aa11.07□□□□□ -0.64
SIM1YIL123W MPS3P47069 682 aa11.07□□□□□ -0.64
SIM1YIL123W DIA3P52290 468 aa11.07□□□□□ -0.64
SIM1YIL123W VEL1P53058 206 aa11.07□□□□□ -0.64
SIM1YIL123W YGR016WP53209 190 aa11.07□□□□□ -0.64
SIM1YIL123W VAC7P53950 1165 aa11.07□□□□□ -0.64
SIM1YIL123W NPL3Q01560 414 aaKnown RBP RIP-Chip data11.07□□□□□ -0.64not detected
SIM1YIL123W EAR1Q03212 550 aa11.07□□□□□ -0.64
SIM1YIL123W PPN1Q04119 674 aa11.07□□□□□ -0.64
SIM1YIL123W TMN2Q04562 672 aa11.07□□□□□ -0.64
SIM1YIL123W SSL1Q04673 461 aaPredicted RBP11.07□□□□□ -0.64
SIM1YIL123W SPC2Q04969 178 aa11.07□□□□□ -0.64
SIM1YIL123W TPK2P06245 380 aa11.06□□□□□ -0.64
SIM1YIL123W PHO81P17442 1178 aa11.06□□□□□ -0.64
SIM1YIL123W SIR1P21691 654 aa11.06□□□□□ -0.64
SIM1YIL123W BRF1P29056 596 aa11.06□□□□□ -0.64
SIM1YIL123W COX13P32799 129 aa11.06□□□□□ -0.64
SIM1YIL123W YKL100CP34248 587 aa11.06□□□□□ -0.64
SIM1YIL123W CAF4P36130 643 aa11.06□□□□□ -0.64
SIM1YIL123W PDX3P38075 228 aaKnown RBP11.06□□□□□ -0.64
SIM1YIL123W IST2P38250 946 aa11.06□□□□□ -0.64
SIM1YIL123W YER034WP40022 185 aaKnown RBP11.06□□□□□ -0.64
SIM1YIL123W IRR1P40541 1150 aa11.06□□□□□ -0.64
SIM1YIL123W IMA5P40884 581 aa11.06□□□□□ -0.64
SIM1YIL123W GCD10P41814 478 aa11.06□□□□□ -0.64
SIM1YIL123W NOP9P47077 666 aaKnown RBP11.06□□□□□ -0.64
SIM1YIL123W MTR3P48240 250 aaPredicted RBP11.06□□□□□ -0.64
SIM1YIL123W PYK2P52489 506 aaKnown RBP11.06□□□□□ -0.64
SIM1YIL123W FLC3P53121 802 aa11.06□□□□□ -0.64
SIM1YIL123W FRE4P53746 719 aa11.06□□□□□ -0.64
SIM1YIL123W RSB1Q08417 382 aa11.06□□□□□ -0.64
SIM1YIL123W MUM3Q08750 479 aa11.06□□□□□ -0.64
SIM1YIL123W CLB4P24871 460 aa11.05□□□□□ -0.64
SIM1YIL123W STE14P32584 239 aa11.05□□□□□ -0.64
SIM1YIL123W PXA2P34230 853 aa11.05□□□□□ -0.64
SIM1YIL123W HSE1P38753 452 aa11.05□□□□□ -0.64
SIM1YIL123W LRP1P38801 184 aaKnown RBP11.05□□□□□ -0.64
SIM1YIL123W REF2P42073 533 aaPredicted RBP11.05□□□□□ -0.64
SIM1YIL123W GET1P53192 235 aa11.05□□□□□ -0.64
SIM1YIL123W YMR111CQ04461 462 aaPredicted RBP11.05□□□□□ -0.64
SIM1YIL123W SEM1O94742 89 aa11.04□□□□□ -0.64
SIM1YIL123W TUB1P09733 447 aaKnown RBP11.04□□□□□ -0.64
SIM1YIL123W CCA1P21269 546 aa11.04□□□□□ -0.64
SIM1YIL123W YCK2P23292 546 aaKnown RBP11.04□□□□□ -0.64
SIM1YIL123W DBP8P38719 431 aa11.04□□□□□ -0.64
SIM1YIL123W CYC2P38909 366 aa11.04□□□□□ -0.64
SIM1YIL123W TIM17P39515 158 aa11.04□□□□□ -0.64
SIM1YIL123W NPT1P39683 429 aaKnown RBP11.04□□□□□ -0.64
SIM1YIL123W GIP4P39732 760 aa11.04□□□□□ -0.64
SIM1YIL123W DOT6P40059 670 aaKnown RBP11.04□□□□□ -0.64
SIM1YIL123W GVP36P40531 326 aaKnown RBP11.04□□□□□ -0.64
SIM1YIL123W EMC4P53073 190 aa11.04□□□□□ -0.64
SIM1YIL123W YMR178WQ03219 274 aaKnown RBP11.04□□□□□ -0.64
SIM1YIL123W YDR344CQ05510 147 aa11.04□□□□□ -0.64
SIM1YIL123W HBT1Q07653 1046 aaKnown RBP11.04□□□□□ -0.64
SIM1YIL123W FLC1Q08967 793 aa11.04□□□□□ -0.64
SIM1YIL123W HUA2Q12134 243 aa11.04□□□□□ -0.64
SIM1YIL123W SEC39Q12745 709 aa11.04□□□□□ -0.64
SIM1YIL123W UBR1P19812 1950 aa11.04□□□□□ -0.64
SIM1YIL123W PHO5P00635 467 aa11.03□□□□□ -0.64
SIM1YIL123W STE6P12866 1290 aa11.03□□□□□ -0.64
SIM1YIL123W KEX2P13134 814 aa11.03□□□□□ -0.64
SIM1YIL123W RSR1P13856 272 aa11.03□□□□□ -0.64
SIM1YIL123W YJU3P28321 313 aa11.03□□□□□ -0.64
SIM1YIL123W YKR078WP36158 585 aaKnown RBP11.03□□□□□ -0.64
SIM1YIL123W YHR020WP38708 688 aaKnown RBP11.03□□□□□ -0.64
SIM1YIL123W PCL5P38794 229 aa11.03□□□□□ -0.64
SIM1YIL123W ARB1P40024 610 aaKnown RBP11.03□□□□□ -0.64
SIM1YIL123W NAN1Q02931 896 aaKnown RBP11.03□□□□□ -0.64
SIM1YIL123W MMT1Q03218 510 aa11.03□□□□□ -0.64
SIM1YIL123W BCH1Q05029 724 aa11.03□□□□□ -0.64
SIM1YIL123W PDH1Q12428 516 aaKnown RBP11.03□□□□□ -0.64
SIM1YIL123W HXK2P04807 486 aaKnown RBP11.02□□□□□ -0.64
SIM1YIL123W HTA2P04912 132 aa11.02□□□□□ -0.64
SIM1YIL123W YAR066WP0CX18 203 aa11.02□□□□□ -0.64
SIM1YIL123W YHR214WP0CX19 203 aa11.02□□□□□ -0.64
SIM1YIL123W OCA4P25366 362 aa11.02□□□□□ -0.64
SIM1YIL123W SGF29P25554 259 aa11.02□□□□□ -0.64
SIM1YIL123W CIN8P27895 1000 aa11.02□□□□□ -0.64
SIM1YIL123W CRM1P30822 1084 aaKnown RBP11.02□□□□□ -0.64
SIM1YIL123W SWE1P32944 819 aa11.02□□□□□ -0.64
SIM1YIL123W YPT52P36018 234 aaKnown RBP11.02□□□□□ -0.64
SIM1YIL123W SSN3P39073 555 aa11.02□□□□□ -0.64
SIM1YIL123W EMP65P40085 556 aa11.02□□□□□ -0.64
SIM1YIL123W RMD8P43620 662 aa11.02□□□□□ -0.64
Retrieved 100 of 5,963 RNA–protein pairs in 42.8 ms