RNA–Protein interactions for RNA: YIL017C

VID28, Transcript of GID Complex subunit, serves as adaptor for regulatory subunit Vid24p, yeast

Gene VID28, Length 2,766 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VID28	YIL017C	GPD1	Q00055	391 aa	Known RBP	4.07	□□□□□ -1.76
VID28	YIL017C	YMR279C	Q03263	540 aa		4.07	□□□□□ -1.76
VID28	YIL017C	YDL121C	Q07541	149 aa		4.07	□□□□□ -1.76
VID28	YIL017C	THI21	Q08975	551 aa		4.07	□□□□□ -1.76
VID28	YIL017C	NSL1	Q12143	216 aa		4.07	□□□□□ -1.76
VID28	YIL017C	SKM1	Q12469	655 aa		4.07	□□□□□ -1.76
VID28	YIL017C	TUB2	P02557	457 aa	Known RBP	4.06	□□□□□ -1.76
VID28	YIL017C	SED4	P25365	1065 aa		4.06	□□□□□ -1.76
VID28	YIL017C	AAD3	P25612	363 aa		4.06	□□□□□ -1.76
VID28	YIL017C	PRR1	P28708	518 aa		4.06	□□□□□ -1.76
VID28	YIL017C	SAC1	P32368	623 aa	Known RBP	4.06	□□□□□ -1.76
VID28	YIL017C	NGG1	P32494	702 aa		4.06	□□□□□ -1.76
VID28	YIL017C	CYM1	P32898	989 aa		4.06	□□□□□ -1.76
VID28	YIL017C	SCD5	P34758	872 aa		4.06	□□□□□ -1.76
VID28	YIL017C	JEN1	P36035	616 aa		4.06	□□□□□ -1.76
VID28	YIL017C	SPC34	P36131	295 aa		4.06	□□□□□ -1.76
VID28	YIL017C	YBR137W	P38276	179 aa		4.06	□□□□□ -1.76
VID28	YIL017C	PCA1	P38360	1216 aa		4.06	□□□□□ -1.76
VID28	YIL017C	RIM11	P38615	370 aa		4.06	□□□□□ -1.76
VID28	YIL017C	ARN1	P38731	627 aa		4.06	□□□□□ -1.76
VID28	YIL017C	SMF2	P38778	549 aa		4.06	□□□□□ -1.76
VID28	YIL017C	SPL2	P38839	148 aa		4.06	□□□□□ -1.76
VID28	YIL017C	EGD2	P38879	174 aa	Known RBP	4.06	□□□□□ -1.76
VID28	YIL017C	YEL020C	P39994	560 aa		4.06	□□□□□ -1.76
VID28	YIL017C	TPA1	P40032	644 aa	Known RBP	4.06	□□□□□ -1.76
VID28	YIL017C	THO1	P40040	218 aa	Known RBP	4.06	□□□□□ -1.76
VID28	YIL017C	DSE1	P40077	573 aa		4.06	□□□□□ -1.76
VID28	YIL017C	MRPL13	Q02204	264 aa		4.06	□□□□□ -1.76
VID28	YIL017C	NAN1	Q02931	896 aa	Known RBP	4.06	□□□□□ -1.76
VID28	YIL017C	BNA7	Q04066	261 aa		4.06	□□□□□ -1.76
VID28	YIL017C	SPO20	Q04359	397 aa		4.06	□□□□□ -1.76
VID28	YIL017C	GMC2	Q06201	188 aa		4.06	□□□□□ -1.76
VID28	YIL017C	YOL019W	Q08157	551 aa		4.06	□□□□□ -1.76
VID28	YIL017C	ATP14	Q12349	124 aa		4.06	□□□□□ -1.76
VID28	YIL017C	DBP10	Q12389	995 aa	Known RBP	4.06	□□□□□ -1.76
VID28	YIL017C	YOR019W	Q99248	730 aa		4.06	□□□□□ -1.76
VID28	YIL017C	YEL076C-A	P0CX16	216 aa		4.06	□□□□□ -1.76
VID28	YIL017C	YLR464W	P0CX17	216 aa		4.06	□□□□□ -1.76
VID28	YIL017C	DAT1	P13483	248 aa	Known RBP	4.06	□□□□□ -1.76
VID28	YIL017C	CLN2	P20438	545 aa		4.06	□□□□□ -1.76
VID28	YIL017C	ITR1	P30605	584 aa		4.06	□□□□□ -1.76
VID28	YIL017C	YKL100C	P34248	587 aa		4.06	□□□□□ -1.76
VID28	YIL017C	YKL133C	P36066	463 aa		4.06	□□□□□ -1.76
VID28	YIL017C	BAP2	P38084	609 aa		4.06	□□□□□ -1.76
VID28	YIL017C	ECM8	P38246	354 aa		4.06	□□□□□ -1.76
VID28	YIL017C	MBA1	P38300	278 aa		4.06	□□□□□ -1.76
VID28	YIL017C	XDJ1	P39102	459 aa		4.06	□□□□□ -1.76
VID28	YIL017C	YEL076C	P39971	216 aa		4.06	□□□□□ -1.76
VID28	YIL017C	RGD2	P43556	714 aa		4.06	□□□□□ -1.76
VID28	YIL017C	TPN1	P53099	579 aa		4.06	□□□□□ -1.76
VID28	YIL017C	GOR1	P53839	350 aa		4.06	□□□□□ -1.76
VID28	YIL017C	YNL095C	P53932	642 aa		4.06	□□□□□ -1.76
VID28	YIL017C	ECM9	Q02202	377 aa		4.06	□□□□□ -1.76
VID28	YIL017C	SKI8	Q02793	397 aa	Predicted RBP	4.06	□□□□□ -1.76
VID28	YIL017C	SNU56	Q03782	492 aa	Known RBP	4.06	□□□□□ -1.76
VID28	YIL017C	DFG5	Q05031	458 aa		4.06	□□□□□ -1.76
VID28	YIL017C	YLR283W	Q05867	314 aa		4.06	□□□□□ -1.76
VID28	YIL017C	IRC3	Q06683	689 aa		4.06	□□□□□ -1.76
VID28	YIL017C	SYC1	Q08553	188 aa	Predicted RBP	4.06	□□□□□ -1.76
VID28	YIL017C	DPH6	Q12429	685 aa		4.06	□□□□□ -1.76
VID28	YIL017C	YPL119C-A	Q3E751	87 aa		4.06	□□□□□ -1.76
VID28	YIL017C	YRF1-3	P0CX14	1859 aa		4.06	□□□□□ -1.76
VID28	YIL017C	YRF1-7	P0CX15	1859 aa		4.06	□□□□□ -1.76
VID28	YIL017C	YRF1-6	P53819	1859 aa		4.06	□□□□□ -1.76
VID28	YIL017C	RPS31	P05759	152 aa	Known RBP	4.05	□□□□□ -1.76
VID28	YIL017C	IMA3	P0CW40	589 aa		4.05	□□□□□ -1.76
VID28	YIL017C	IMA4	P0CW41	589 aa		4.05	□□□□□ -1.76
VID28	YIL017C	PRP21	P32524	280 aa	Predicted RBP	4.05	□□□□□ -1.76
VID28	YIL017C	PDR3	P33200	976 aa		4.05	□□□□□ -1.76
VID28	YIL017C	FAA3	P39002	694 aa		4.05	□□□□□ -1.76
VID28	YIL017C	AIM2	P39721	246 aa		4.05	□□□□□ -1.76
VID28	YIL017C	ECM10	P39987	644 aa		4.05	□□□□□ -1.76
VID28	YIL017C	ARG2	P40360	574 aa		4.05	□□□□□ -1.76
VID28	YIL017C	UTP25	P40498	721 aa	Known RBP	4.05	□□□□□ -1.76
VID28	YIL017C	CHS6	P40955	746 aa		4.05	□□□□□ -1.76
VID28	YIL017C	IRC18	P47056	224 aa		4.05	□□□□□ -1.76
VID28	YIL017C	BFA1	P47113	574 aa		4.05	□□□□□ -1.76
VID28	YIL017C	PRP24	P49960	444 aa	Known RBP	4.05	□□□□□ -1.76
VID28	YIL017C	AZR1	P50080	613 aa		4.05	□□□□□ -1.76
VID28	YIL017C	CPR8	P53728	308 aa		4.05	□□□□□ -1.76
VID28	YIL017C	RMT2	Q03305	412 aa		4.05	□□□□□ -1.76
VID28	YIL017C	SCS7	Q03529	384 aa		4.05	□□□□□ -1.76
VID28	YIL017C	YPR091C	Q06833	770 aa		4.05	□□□□□ -1.76
VID28	YIL017C	IMA2	Q08295	589 aa		4.05	□□□□□ -1.76
VID28	YIL017C	ULA1	Q12059	462 aa		4.05	□□□□□ -1.76
VID28	YIL017C	MLH3	Q12083	715 aa		4.05	□□□□□ -1.76
VID28	YIL017C	PHM7	Q12252	991 aa		4.05	□□□□□ -1.76
VID28	YIL017C	YOR012W	Q12351	137 aa		4.05	□□□□□ -1.76
VID28	YIL017C	RTN2	Q12443	393 aa		4.05	□□□□□ -1.76
VID28	YIL017C	STE2	D6VTK4	431 aa		4.05	□□□□□ -1.76
VID28	YIL017C	BCY1	P07278	416 aa	Known RBP	4.05	□□□□□ -1.76
VID28	YIL017C	SRO9	P25567	434 aa	Known RBP	4.05	□□□□□ -1.76
VID28	YIL017C	ACP1	P32463	125 aa		4.05	□□□□□ -1.76
VID28	YIL017C	MUD1	P32605	298 aa	Known RBP	4.05	□□□□□ -1.76
VID28	YIL017C	CDC13	P32797	924 aa	Known RBP	4.05	□□□□□ -1.76
VID28	YIL017C	PET10	P36139	283 aa		4.05	□□□□□ -1.76
VID28	YIL017C	GRE3	P38715	327 aa	Known RBP RIP-Chip data	4.05	□□□□□ -1.76	not detected
VID28	YIL017C	RTC3	P38804	111 aa	Predicted RBP	4.05	□□□□□ -1.76
VID28	YIL017C	BZZ1	P38822	633 aa		4.05	□□□□□ -1.76
VID28	YIL017C	YHR202W	P38887	602 aa		4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms