RNA–Protein interactions for RNA: YGR105W

VMA21, Transcript of Integral membrane protein required for V-ATPase function, yeast

Gene VMA21, Length 234 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA21	YGR105W	PDH1	Q12428	516 aa	Known RBP	3.18	□□□□□ -1.9
VMA21	YGR105W	PUT2	P07275	575 aa		3.17	□□□□□ -1.9
VMA21	YGR105W	VMA16	P23968	213 aa		3.17	□□□□□ -1.9
VMA21	YGR105W	DHH1	P39517	506 aa	Known RBP	3.17	□□□□□ -1.9
VMA21	YGR105W	PYK2	P52489	506 aa	Known RBP	3.17	□□□□□ -1.9
VMA21	YGR105W	ERG26	P53199	349 aa	Known RBP	3.17	□□□□□ -1.9
VMA21	YGR105W	SSK1	Q07084	712 aa		3.17	□□□□□ -1.9
VMA21	YGR105W	LEU9	Q12166	604 aa	Known RBP	3.17	□□□□□ -1.9
VMA21	YGR105W	ARP6	Q12509	438 aa		3.17	□□□□□ -1.9
VMA21	YGR105W	YBR298C-A	Q8TGK4	73 aa		3.17	□□□□□ -1.9
VMA21	YGR105W	PRP16	P15938	1071 aa	Predicted RBP	3.16	□□□□□ -1.9
VMA21	YGR105W	SNC1	P31109	117 aa		3.16	□□□□□ -1.9
VMA21	YGR105W	MAL33	P38157	468 aa		3.16	□□□□□ -1.9
VMA21	YGR105W	RRP3	P38712	501 aa	Known RBP	3.16	□□□□□ -1.9
VMA21	YGR105W	RTS1	P38903	757 aa		3.16	□□□□□ -1.9
VMA21	YGR105W	DPH1	P40487	425 aa	Known RBP	3.16	□□□□□ -1.9
VMA21	YGR105W	RTS3	P53289	263 aa		3.16	□□□□□ -1.9
VMA21	YGR105W	RAD30	Q04049	632 aa		3.16	□□□□□ -1.9
VMA21	YGR105W	YEH2	Q07950	538 aa		3.16	□□□□□ -1.9
VMA21	YGR105W	SSP2	Q08646	371 aa		3.16	□□□□□ -1.9
VMA21	YGR105W	TCO89	Q08921	799 aa		3.16	□□□□□ -1.9
VMA21	YGR105W	FUM1	P08417	488 aa	Known RBP	3.15	□□□□□ -1.91
VMA21	YGR105W	TYR1	P20049	452 aa		3.15	□□□□□ -1.91
VMA21	YGR105W	KGD1	P20967	1014 aa	Known RBP	3.15	□□□□□ -1.91
VMA21	YGR105W	ADH7	P25377	361 aa		3.15	□□□□□ -1.91
VMA21	YGR105W	ATS1	P31386	333 aa		3.15	□□□□□ -1.91
VMA21	YGR105W	MTR2	P34232	184 aa	Known RBP	3.15	□□□□□ -1.91
VMA21	YGR105W	LAG1	P38703	411 aa		3.15	□□□□□ -1.91
VMA21	YGR105W	ARC1	P46672	376 aa	Known RBP	3.15	□□□□□ -1.91
VMA21	YGR105W	IKS1	P47042	667 aa		3.15	□□□□□ -1.91
VMA21	YGR105W	SMM1	P53720	384 aa	Known RBP	3.15	□□□□□ -1.91
VMA21	YGR105W	IMP4	P53941	290 aa	Known RBP	3.15	□□□□□ -1.91
VMA21	YGR105W	YVH1	Q02256	364 aa	Known RBP	3.15	□□□□□ -1.91
VMA21	YGR105W	YPL014W	Q02606	381 aa		3.15	□□□□□ -1.91
VMA21	YGR105W	YMR160W	Q03823	816 aa		3.15	□□□□□ -1.91
VMA21	YGR105W	YMR087W	Q04299	284 aa		3.15	□□□□□ -1.91
VMA21	YGR105W	DPB4	Q04603	196 aa	Known RBP	3.15	□□□□□ -1.91
VMA21	YGR105W	SEC62	P21825	274 aa		3.14	□□□□□ -1.91
VMA21	YGR105W	TRX2	P22803	104 aa	Known RBP	3.14	□□□□□ -1.91
VMA21	YGR105W	SGV1	P23293	657 aa	Known RBP	3.14	□□□□□ -1.91
VMA21	YGR105W	RER1	P25560	188 aa		3.14	□□□□□ -1.91
VMA21	YGR105W	SYN8	P31377	255 aa		3.14	□□□□□ -1.91
VMA21	YGR105W	AGP2	P38090	596 aa		3.14	□□□□□ -1.91
VMA21	YGR105W	BSC5	P53755	489 aa		3.14	□□□□□ -1.91
VMA21	YGR105W	SAM50	P53969	484 aa		3.14	□□□□□ -1.91
VMA21	YGR105W	PPT2	Q12036	173 aa		3.14	□□□□□ -1.91
VMA21	YGR105W	SKM1	Q12469	655 aa		3.14	□□□□□ -1.91
VMA21	YGR105W	RPL15A	P05748	204 aa	Known RBP	3.13	□□□□□ -1.91
VMA21	YGR105W	CDC24	P11433	854 aa	Predicted RBP	3.13	□□□□□ -1.91
VMA21	YGR105W	CMK1	P27466	446 aa	Known RBP	3.13	□□□□□ -1.91
VMA21	YGR105W	LOS1	P33418	1100 aa	Predicted RBP	3.13	□□□□□ -1.91
VMA21	YGR105W	ECM15	P35195	104 aa		3.13	□□□□□ -1.91
VMA21	YGR105W	MDM31	P38880	579 aa		3.13	□□□□□ -1.91
VMA21	YGR105W	PTR3	P43606	678 aa		3.13	□□□□□ -1.91
VMA21	YGR105W	YGL082W	P53155	381 aa		3.13	□□□□□ -1.91
VMA21	YGR105W	DUG3	P53871	357 aa		3.13	□□□□□ -1.91
VMA21	YGR105W	YSA1	Q01976	231 aa		3.13	□□□□□ -1.91
VMA21	YGR105W	THI20	Q08224	551 aa		3.13	□□□□□ -1.91
VMA21	YGR105W	ARD1	P07347	238 aa	Predicted RBP	3.12	□□□□□ -1.91
VMA21	YGR105W	PRE8	P23639	250 aa		3.12	□□□□□ -1.91
VMA21	YGR105W	VPS17	P32913	551 aa		3.12	□□□□□ -1.91
VMA21	YGR105W	YKL100C	P34248	587 aa		3.12	□□□□□ -1.91
VMA21	YGR105W	AUR1	P36107	401 aa	Predicted RBP	3.12	□□□□□ -1.91
VMA21	YGR105W	YHR218W	P38899	603 aa		3.12	□□□□□ -1.91
VMA21	YGR105W	ROK1	P45818	564 aa	Predicted RBP	3.12	□□□□□ -1.91
VMA21	YGR105W	EFM6	P53970	246 aa		3.12	□□□□□ -1.91
VMA21	YGR105W	RPM2	Q02773	1202 aa		3.12	□□□□□ -1.91
VMA21	YGR105W	HCR1	Q05775	265 aa	Known RBP	3.12	□□□□□ -1.91
VMA21	YGR105W	GDH1	P07262	454 aa	Known RBP	3.11	□□□□□ -1.91
VMA21	YGR105W	BUD5	P25300	642 aa	Predicted RBP	3.11	□□□□□ -1.91
VMA21	YGR105W	PUP3	P25451	205 aa	Known RBP	3.11	□□□□□ -1.91
VMA21	YGR105W	IMG1	P25626	169 aa		3.11	□□□□□ -1.91
VMA21	YGR105W	CPR3	P25719	182 aa		3.11	□□□□□ -1.91
VMA21	YGR105W	BUD14	P27637	709 aa		3.11	□□□□□ -1.91
VMA21	YGR105W	NDC1	P32500	655 aa		3.11	□□□□□ -1.91
VMA21	YGR105W	SIP2	P34164	415 aa	Known RBP	3.11	□□□□□ -1.91
VMA21	YGR105W	YBL055C	P34220	418 aa	Predicted RBP	3.11	□□□□□ -1.91
VMA21	YGR105W	ICS2	P38284	255 aa		3.11	□□□□□ -1.91
VMA21	YGR105W	VPS52	P39904	641 aa		3.11	□□□□□ -1.91
VMA21	YGR105W	YTA12	P40341	825 aa		3.11	□□□□□ -1.91
VMA21	YGR105W	LYS14	P40971	790 aa		3.11	□□□□□ -1.91
VMA21	YGR105W	YFR016C	P43597	1233 aa	Known RBP	3.11	□□□□□ -1.91
VMA21	YGR105W	LCL3	P53153	274 aa		3.11	□□□□□ -1.91
VMA21	YGR105W	BUD32	P53323	261 aa		3.11	□□□□□ -1.91
VMA21	YGR105W	MEP3	P53390	489 aa		3.11	□□□□□ -1.91
VMA21	YGR105W	RHO4	Q00246	291 aa		3.11	□□□□□ -1.91
VMA21	YGR105W	MSC1	Q03104	513 aa		3.11	□□□□□ -1.91
VMA21	YGR105W	GLO2	Q05584	274 aa		3.11	□□□□□ -1.91
VMA21	YGR105W	CDC45	Q08032	650 aa		3.11	□□□□□ -1.91
VMA21	YGR105W	YPL272C	Q08984	517 aa		3.11	□□□□□ -1.91
VMA21	YGR105W	CYB2	P00175	591 aa		3.1	□□□□□ -1.91
VMA21	YGR105W	RPL19A	P0CX82	189 aa	Known RBP	3.1	□□□□□ -1.91
VMA21	YGR105W	RPL19B	P0CX83	189 aa	Predicted RBP	3.1	□□□□□ -1.91
VMA21	YGR105W	KAR3	P17119	729 aa		3.1	□□□□□ -1.91
VMA21	YGR105W	BOS1	P25385	244 aa		3.1	□□□□□ -1.91
VMA21	YGR105W	POL4	P25615	582 aa		3.1	□□□□□ -1.91
VMA21	YGR105W	AGA1	P32323	725 aa		3.1	□□□□□ -1.91
VMA21	YGR105W	PTR2	P32901	601 aa		3.1	□□□□□ -1.91
VMA21	YGR105W	YOX1	P34161	385 aa		3.1	□□□□□ -1.91
VMA21	YGR105W	YNK1	P36010	153 aa	Known RBP	3.1	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms