RNA–Protein interactions for RNA: YGR006W

PRP18, Transcript of Splicing factor and component of snRNP U5, yeastyeast

Gene PRP18, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP18YGR006W MDM1Q01846 1127 aa3.94□□□□□ -1.78
PRP18YGR006W ADE13Q05911 482 aaKnown RBP3.94□□□□□ -1.78
PRP18YGR006W YDL218WQ07629 317 aa3.94□□□□□ -1.78
PRP18YGR006W RTT109Q07794 436 aa3.94□□□□□ -1.78
PRP18YGR006W GEP3Q08622 556 aa3.94□□□□□ -1.78
PRP18YGR006W PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.94□□□□□ -1.78not detected
PRP18YGR006W DFR1P07807 211 aaKnown RBP RIP-Chip data3.93□□□□□ -1.78not detected
PRP18YGR006W SEF1P34228 1148 aa3.93□□□□□ -1.78
PRP18YGR006W NUP133P36161 1157 aa3.93□□□□□ -1.78
PRP18YGR006W JNM1P36224 373 aa3.93□□□□□ -1.78
PRP18YGR006W YPK3P38070 525 aa3.93□□□□□ -1.78
PRP18YGR006W ARP1P38696 384 aa3.93□□□□□ -1.78
PRP18YGR006W GND1P38720 489 aaKnown RBP3.93□□□□□ -1.78
PRP18YGR006W UTP9P38882 575 aaKnown RBP3.93□□□□□ -1.78
PRP18YGR006W NPR2P39923 615 aa3.93□□□□□ -1.78
PRP18YGR006W YIL060WP40519 144 aa3.93□□□□□ -1.78
PRP18YGR006W IAH1P41734 238 aa3.93□□□□□ -1.78
PRP18YGR006W GAT1P43574 510 aa3.93□□□□□ -1.78
PRP18YGR006W SEC5P89102 971 aa3.93□□□□□ -1.78
PRP18YGR006W RSM23Q01163 450 aa3.93□□□□□ -1.78
PRP18YGR006W TDA9Q04545 1251 aa3.93□□□□□ -1.78
PRP18YGR006W MFB1Q04922 465 aa3.93□□□□□ -1.78
PRP18YGR006W CDC45Q08032 650 aa3.93□□□□□ -1.78
PRP18YGR006W DSE3Q08729 430 aa3.93□□□□□ -1.78
PRP18YGR006W TAH18Q12181 623 aa3.93□□□□□ -1.78
PRP18YGR006W CDC31P06704 161 aaKnown RBP3.92□□□□□ -1.78
PRP18YGR006W KGD1P20967 1014 aaKnown RBP3.92□□□□□ -1.78
PRP18YGR006W SYN8P31377 255 aa3.92□□□□□ -1.78
PRP18YGR006W ALG5P40350 334 aa3.92□□□□□ -1.78
PRP18YGR006W VPS38Q05919 439 aa3.92□□□□□ -1.78
PRP18YGR006W MLH2Q07980 695 aa3.92□□□□□ -1.78
PRP18YGR006W RPS10AQ08745 105 aaPredicted RBP3.92□□□□□ -1.78
PRP18YGR006W BUD7Q08754 746 aa3.92□□□□□ -1.78
PRP18YGR006W RDR1Q08904 546 aa3.92□□□□□ -1.78
PRP18YGR006W RPL42AP0CX27 106 aaKnown RBP3.91□□□□□ -1.78
PRP18YGR006W RPL42BP0CX28 106 aaKnown RBP3.91□□□□□ -1.78
PRP18YGR006W SNF3P10870 884 aa3.91□□□□□ -1.78
PRP18YGR006W EST1P17214 699 aaPredicted RBP3.91□□□□□ -1.78
PRP18YGR006W ART10P18634 518 aaKnown RBP3.91□□□□□ -1.78
PRP18YGR006W SUI2P20459 304 aaKnown RBP3.91□□□□□ -1.78
PRP18YGR006W GID7P25569 745 aa3.91□□□□□ -1.78
PRP18YGR006W TMT1P32643 299 aa3.91□□□□□ -1.78
PRP18YGR006W ATO2P32907 282 aa3.91□□□□□ -1.78
PRP18YGR006W SGS1P35187 1447 aa3.91□□□□□ -1.78
PRP18YGR006W UBP11P36026 717 aa3.91□□□□□ -1.78
PRP18YGR006W RPL32P38061 130 aaKnown RBP3.91□□□□□ -1.78
PRP18YGR006W CIN4P39110 191 aa3.91□□□□□ -1.78
PRP18YGR006W IRC6P43615 237 aa3.91□□□□□ -1.78
PRP18YGR006W SRB7P47822 140 aa3.91□□□□□ -1.78
PRP18YGR006W PYK2P52489 506 aaKnown RBP3.91□□□□□ -1.78
PRP18YGR006W SOL4P53315 255 aa3.91□□□□□ -1.78
PRP18YGR006W TIM10P87108 93 aa3.91□□□□□ -1.78
PRP18YGR006W YMR160WQ03823 816 aa3.91□□□□□ -1.78
PRP18YGR006W FIN1Q03898 291 aa3.91□□□□□ -1.78
PRP18YGR006W YLR281CQ05863 155 aa3.91□□□□□ -1.78
PRP18YGR006W ICT1Q12385 394 aa3.91□□□□□ -1.78
PRP18YGR006W AVL9Q12500 764 aa3.91□□□□□ -1.78
PRP18YGR006W PDR3P33200 976 aa3.9□□□□□ -1.79
PRP18YGR006W ROT2P38138 954 aa3.9□□□□□ -1.79
PRP18YGR006W YIL152WP40455 235 aa3.9□□□□□ -1.79
PRP18YGR006W SPO22P40511 975 aa3.9□□□□□ -1.79
PRP18YGR006W RTS2P40962 232 aa3.9□□□□□ -1.79
PRP18YGR006W RPS10BP46784 105 aaKnown RBP3.9□□□□□ -1.79
PRP18YGR006W HOS2P53096 452 aaPredicted RBP3.9□□□□□ -1.79
PRP18YGR006W MRPL19P53875 158 aa3.9□□□□□ -1.79
PRP18YGR006W ESBP6P53918 673 aa3.9□□□□□ -1.79
PRP18YGR006W MPS1P54199 764 aa3.9□□□□□ -1.79
PRP18YGR006W YPL068CQ02749 293 aa3.9□□□□□ -1.79
PRP18YGR006W EKI1Q03764 534 aa3.9□□□□□ -1.79
PRP18YGR006W RSF1Q05043 376 aa3.9□□□□□ -1.79
PRP18YGR006W FOB1O13329 566 aa3.89□□□□□ -1.79
PRP18YGR006W ARG3P05150 338 aa3.89□□□□□ -1.79
PRP18YGR006W PDA1P16387 420 aaKnown RBP3.89□□□□□ -1.79
PRP18YGR006W SNC1P31109 117 aa3.89□□□□□ -1.79
PRP18YGR006W TIF3P34167 436 aaKnown RBP3.89□□□□□ -1.79
PRP18YGR006W MTR2P34232 184 aaKnown RBP3.89□□□□□ -1.79
PRP18YGR006W TCD2P36101 447 aaKnown RBP3.89□□□□□ -1.79
PRP18YGR006W SRO77P38163 1010 aa3.89□□□□□ -1.79
PRP18YGR006W LAG1P38703 411 aa3.89□□□□□ -1.79
PRP18YGR006W NOC2P39744 710 aaKnown RBP3.89□□□□□ -1.79
PRP18YGR006W MET28P40573 187 aa3.89□□□□□ -1.79
PRP18YGR006W MAF1P41910 395 aa3.89□□□□□ -1.79
PRP18YGR006W PKP2P53170 491 aa3.89□□□□□ -1.79
PRP18YGR006W DUG3P53871 357 aa3.89□□□□□ -1.79
PRP18YGR006W IPI3P53877 555 aa3.89□□□□□ -1.79
PRP18YGR006W BET4Q00618 327 aa3.89□□□□□ -1.79
PRP18YGR006W YMR254CQ04838 102 aa3.89□□□□□ -1.79
PRP18YGR006W SNA4Q07549 140 aa3.89□□□□□ -1.79
PRP18YGR006W GAL80P04387 435 aa3.88□□□□□ -1.79
PRP18YGR006W YFL068WP0CX99 160 aa3.88□□□□□ -1.79
PRP18YGR006W YLL066W-AP0CY00 160 aa3.88□□□□□ -1.79
PRP18YGR006W YLL067W-AP0CY01 160 aa3.88□□□□□ -1.79
PRP18YGR006W MRP13P12686 339 aa3.88□□□□□ -1.79
PRP18YGR006W YKL023WP36103 277 aaKnown RBP3.88□□□□□ -1.79
PRP18YGR006W IMD4P50094 524 aaKnown RBP3.88□□□□□ -1.79
PRP18YGR006W YGR126WP53274 230 aa3.88□□□□□ -1.79
PRP18YGR006W NUP100Q02629 959 aa3.88□□□□□ -1.79
PRP18YGR006W MSC1Q03104 513 aa3.88□□□□□ -1.79
PRP18YGR006W SSK1Q07084 712 aa3.88□□□□□ -1.79
PRP18YGR006W ARP6Q12509 438 aa3.88□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms