RNA–Protein interactions for RNA: YGL098W

USE1, Transcript of Essential SNARE protein localized to the ER, yeastyeast

Gene USE1, Length 738 nt, Biotype protein coding, Subcellular localisation Cell cortex, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USE1YGL098W WHI2P12611 486 aa3.24□□□□□ -1.89
USE1YGL098W PRI2P20457 528 aa3.24□□□□□ -1.89
USE1YGL098W PRP5P21372 849 aaPredicted RBP3.24□□□□□ -1.89
USE1YGL098W YCR015CP25616 317 aa3.24□□□□□ -1.89
USE1YGL098W CWH43P25618 953 aa3.24□□□□□ -1.89
USE1YGL098W SYP1P25623 870 aaKnown RBP3.24□□□□□ -1.89
USE1YGL098W RPS7AP26786 190 aaKnown RBP3.24□□□□□ -1.89
USE1YGL098W DBF4P32325 704 aa3.24□□□□□ -1.89
USE1YGL098W SPT14P32363 452 aa3.24□□□□□ -1.89
USE1YGL098W CYS4P32582 507 aaKnown RBP3.24□□□□□ -1.89
USE1YGL098W KAP122P32767 1081 aa3.24□□□□□ -1.89
USE1YGL098W PPQ1P32945 549 aa3.24□□□□□ -1.89
USE1YGL098W YKL023WP36103 277 aaKnown RBP3.24□□□□□ -1.89
USE1YGL098W YKR073CP36153 106 aa3.24□□□□□ -1.89
USE1YGL098W ALG3P38179 458 aa3.24□□□□□ -1.89
USE1YGL098W ERG7P38604 731 aa3.24□□□□□ -1.89
USE1YGL098W RIM4P38741 713 aa3.24□□□□□ -1.89
USE1YGL098W DUN1P39009 513 aa3.24□□□□□ -1.89
USE1YGL098W ERP2P39704 215 aa3.24□□□□□ -1.89
USE1YGL098W GPB2P39717 880 aa3.24□□□□□ -1.89
USE1YGL098W PZF1P39933 429 aa3.24□□□□□ -1.89
USE1YGL098W RMD6P39975 231 aa3.24□□□□□ -1.89
USE1YGL098W DSE1P40077 573 aa3.24□□□□□ -1.89
USE1YGL098W YMR134WP40207 237 aa3.24□□□□□ -1.89
USE1YGL098W GID8P40208 455 aa3.24□□□□□ -1.89
USE1YGL098W YMR147WP40218 223 aaKnown RBP3.24□□□□□ -1.89
USE1YGL098W CSM2P40465 213 aa3.24□□□□□ -1.89
USE1YGL098W UTP25P40498 721 aaKnown RBP3.24□□□□□ -1.89
USE1YGL098W AGE2P40529 298 aa3.24□□□□□ -1.89
USE1YGL098W TED1P40533 473 aa3.24□□□□□ -1.89
USE1YGL098W YJL107CP42947 387 aa3.24□□□□□ -1.89
USE1YGL098W TOS3P43637 560 aa3.24□□□□□ -1.89
USE1YGL098W ROK1P45818 564 aaPredicted RBP3.24□□□□□ -1.89
USE1YGL098W ARC1P46672 376 aaKnown RBP3.24□□□□□ -1.89
USE1YGL098W IRC8P47046 822 aa3.24□□□□□ -1.89
USE1YGL098W COX16P47081 118 aa3.24□□□□□ -1.89
USE1YGL098W AIM24P47127 394 aa3.24□□□□□ -1.89
USE1YGL098W EFM3P47163 339 aa3.24□□□□□ -1.89
USE1YGL098W MRK1P50873 501 aa3.24□□□□□ -1.89
USE1YGL098W IMA1P53051 589 aa3.24□□□□□ -1.89
USE1YGL098W GET1P53192 235 aa3.24□□□□□ -1.89
USE1YGL098W YGR067CP53243 804 aa3.24□□□□□ -1.89
USE1YGL098W OKP1P53298 406 aa3.24□□□□□ -1.89
USE1YGL098W SLI1P53304 468 aa3.24□□□□□ -1.89
USE1YGL098W NAN1Q02931 896 aaKnown RBP3.24□□□□□ -1.89
USE1YGL098W NHP10Q03435 203 aa3.24□□□□□ -1.89
USE1YGL098W RSN1Q03516 953 aa3.24□□□□□ -1.89
USE1YGL098W PRP42Q03776 544 aaKnown RBP3.24□□□□□ -1.89
USE1YGL098W VHS1Q03785 461 aa3.24□□□□□ -1.89
USE1YGL098W TIF35Q04067 274 aaKnown RBP3.24□□□□□ -1.89
USE1YGL098W BSC2Q05611 235 aa3.24□□□□□ -1.89
USE1YGL098W PHM6Q05637 104 aa3.24□□□□□ -1.89
USE1YGL098W BUR2Q05949 395 aa3.24□□□□□ -1.89
USE1YGL098W KAP95Q06142 861 aaKnown RBP3.24□□□□□ -1.89
USE1YGL098W GMC2Q06201 188 aa3.24□□□□□ -1.89
USE1YGL098W YLR352WQ06479 807 aa3.24□□□□□ -1.89
USE1YGL098W SWA2Q06677 668 aa3.24□□□□□ -1.89
USE1YGL098W GSH2Q08220 491 aa3.24□□□□□ -1.89
USE1YGL098W CUE5Q08412 411 aaKnown RBP3.24□□□□□ -1.89
USE1YGL098W SLD7Q08457 257 aa3.24□□□□□ -1.89
USE1YGL098W SYC1Q08553 188 aaPredicted RBP3.24□□□□□ -1.89
USE1YGL098W OXR1Q08952 273 aa3.24□□□□□ -1.89
USE1YGL098W YPL216WQ08964 1102 aa3.24□□□□□ -1.89
USE1YGL098W THI21Q08975 551 aa3.24□□□□□ -1.89
USE1YGL098W YOL107WQ12239 342 aa3.24□□□□□ -1.89
USE1YGL098W GPM3Q12326 303 aa3.24□□□□□ -1.89
USE1YGL098W YPR1Q12458 312 aa3.24□□□□□ -1.89
USE1YGL098W YCL001W-BQ96VH2 84 aa3.24□□□□□ -1.89
USE1YGL098W TRP2P00899 507 aaKnown RBP3.23□□□□□ -1.89
USE1YGL098W ADE8P04161 214 aa3.23□□□□□ -1.89
USE1YGL098W RPL25P04456 142 aaKnown RBP3.23□□□□□ -1.89
USE1YGL098W TPK3P05986 398 aa3.23□□□□□ -1.89
USE1YGL098W PUT2P07275 575 aa3.23□□□□□ -1.89
USE1YGL098W GRX2P17695 143 aaKnown RBP3.23□□□□□ -1.89
USE1YGL098W RIT1P23796 513 aa3.23□□□□□ -1.89
USE1YGL098W CNB1P25296 175 aa3.23□□□□□ -1.89
USE1YGL098W ADP1P25371 1049 aa3.23□□□□□ -1.89
USE1YGL098W CHA1P25379 360 aaKnown RBP3.23□□□□□ -1.89
USE1YGL098W MCM5P29496 775 aaKnown RBP3.23□□□□□ -1.89
USE1YGL098W GPI10P30777 616 aa3.23□□□□□ -1.89
USE1YGL098W THI4P32318 326 aa3.23□□□□□ -1.89
USE1YGL098W DBF20P32328 564 aa3.23□□□□□ -1.89
USE1YGL098W SAC1P32368 623 aaKnown RBP3.23□□□□□ -1.89
USE1YGL098W MSS1P32559 526 aaPredicted RBP3.23□□□□□ -1.89
USE1YGL098W DOA4P32571 926 aa3.23□□□□□ -1.89
USE1YGL098W PTM1P32857 523 aa3.23□□□□□ -1.89
USE1YGL098W UGP1P32861 499 aaKnown RBP3.23□□□□□ -1.89
USE1YGL098W SRB2P34162 210 aa3.23□□□□□ -1.89
USE1YGL098W YKL100CP34248 587 aa3.23□□□□□ -1.89
USE1YGL098W TOM20P35180 183 aa3.23□□□□□ -1.89
USE1YGL098W SDS22P36047 338 aa3.23□□□□□ -1.89
USE1YGL098W CAF4P36130 643 aa3.23□□□□□ -1.89
USE1YGL098W SPC34P36131 295 aa3.23□□□□□ -1.89
USE1YGL098W NOP4P37838 685 aaKnown RBP3.23□□□□□ -1.89
USE1YGL098W ECM13P38195 257 aa3.23□□□□□ -1.89
USE1YGL098W CCZ1P38273 704 aa3.23□□□□□ -1.89
USE1YGL098W PCA1P38360 1216 aa3.23□□□□□ -1.89
USE1YGL098W LEU5P38702 357 aa3.23□□□□□ -1.89
USE1YGL098W SMF2P38778 549 aa3.23□□□□□ -1.89
USE1YGL098W MLH1P38920 769 aa3.23□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 21.7 ms