RNA–Protein interactions for RNA: YER006W

NUG1, Transcript of GTPase that associates with nuclear 60S pre-ribosomes, yeast

Gene NUG1, Length 1,563 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUG1	YER006W	SKM1	Q12469	655 aa		4.13	□□□□□ -1.75
NUG1	YER006W	APM4	Q99186	491 aa		4.13	□□□□□ -1.75
NUG1	YER006W	DDP1	Q99321	188 aa	Known RBP	4.13	□□□□□ -1.75
NUG1	YER006W	RPL24A	P04449	155 aa	Known RBP	4.12	□□□□□ -1.75
NUG1	YER006W	NSP1	P14907	823 aa	Known RBP	4.12	□□□□□ -1.75
NUG1	YER006W	CDC23	P16522	626 aa		4.12	□□□□□ -1.75
NUG1	YER006W	VPS33	P20795	691 aa		4.12	□□□□□ -1.75
NUG1	YER006W	AEP2	P22136	580 aa		4.12	□□□□□ -1.75
NUG1	YER006W	RIT1	P23796	513 aa		4.12	□□□□□ -1.75
NUG1	YER006W	ADY2	P25613	283 aa		4.12	□□□□□ -1.75
NUG1	YER006W	CHS3	P29465	1165 aa		4.12	□□□□□ -1.75
NUG1	YER006W	MCM4	P30665	933 aa	Known RBP	4.12	□□□□□ -1.75
NUG1	YER006W	HMX1	P32339	317 aa		4.12	□□□□□ -1.75
NUG1	YER006W	ORC2	P32833	620 aa		4.12	□□□□□ -1.75
NUG1	YER006W	NIC96	P34077	839 aa		4.12	□□□□□ -1.75
NUG1	YER006W	NNK1	P36003	928 aa		4.12	□□□□□ -1.75
NUG1	YER006W	ELF1	P36053	145 aa		4.12	□□□□□ -1.75
NUG1	YER006W	YKL077W	P36081	392 aa		4.12	□□□□□ -1.75
NUG1	YER006W	NEM1	P38757	446 aa		4.12	□□□□□ -1.75
NUG1	YER006W	YHR054C	P38780	354 aa		4.12	□□□□□ -1.75
NUG1	YER006W	LRP1	P38801	184 aa	Known RBP	4.12	□□□□□ -1.75
NUG1	YER006W	SBE22	P38814	852 aa		4.12	□□□□□ -1.75
NUG1	YER006W	YHR202W	P38887	602 aa		4.12	□□□□□ -1.75
NUG1	YER006W	HXT13	P39924	564 aa		4.12	□□□□□ -1.75
NUG1	YER006W	RTR1	P40084	226 aa	Predicted RBP	4.12	□□□□□ -1.75
NUG1	YER006W	GID8	P40208	455 aa		4.12	□□□□□ -1.75
NUG1	YER006W	CCT7	P42943	550 aa	Known RBP	4.12	□□□□□ -1.75
NUG1	YER006W	RPC17	P47076	161 aa		4.12	□□□□□ -1.75
NUG1	YER006W	RPS7B	P48164	190 aa	Known RBP	4.12	□□□□□ -1.75
NUG1	YER006W	HSH155	P49955	971 aa	Known RBP	4.12	□□□□□ -1.75
NUG1	YER006W	PSP1	P50896	841 aa	Known RBP	4.12	□□□□□ -1.75
NUG1	YER006W	CUL3	P53202	744 aa		4.12	□□□□□ -1.75
NUG1	YER006W	BRE5	P53741	515 aa	Known RBP	4.12	□□□□□ -1.75
NUG1	YER006W	ORC3	P54790	616 aa		4.12	□□□□□ -1.75
NUG1	YER006W	MUK1	Q02866	612 aa		4.12	□□□□□ -1.75
NUG1	YER006W	RLI1	Q03195	608 aa	Known RBP	4.12	□□□□□ -1.75
NUG1	YER006W	NHP10	Q03435	203 aa		4.12	□□□□□ -1.75
NUG1	YER006W	VHS1	Q03785	461 aa		4.12	□□□□□ -1.75
NUG1	YER006W	ARX1	Q03862	593 aa	Known RBP	4.12	□□□□□ -1.75
NUG1	YER006W	SWF1	Q04629	336 aa		4.12	□□□□□ -1.75
NUG1	YER006W	BCH1	Q05029	724 aa		4.12	□□□□□ -1.75
NUG1	YER006W	ECM7	Q06200	448 aa		4.12	□□□□□ -1.75
NUG1	YER006W	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	4.12	□□□□□ -1.75	not detected
NUG1	YER006W	SSP2	Q08646	371 aa		4.12	□□□□□ -1.75
NUG1	YER006W	RAX1	Q08760	435 aa		4.12	□□□□□ -1.75
NUG1	YER006W	YPL272C	Q08984	517 aa		4.12	□□□□□ -1.75
NUG1	YER006W	WRS1	Q12109	432 aa	Known RBP	4.12	□□□□□ -1.75
NUG1	YER006W	FYV7	Q12247	151 aa		4.12	□□□□□ -1.75
NUG1	YER006W	ATG31	Q12421	196 aa		4.12	□□□□□ -1.75
NUG1	YER006W	AVL9	Q12500	764 aa		4.12	□□□□□ -1.75
NUG1	YER006W	MIS1	P09440	975 aa	Known RBP	4.11	□□□□□ -1.75
NUG1	YER006W	TY1A-LR4	P0C2I8	440 aa	Known RBP	4.11	□□□□□ -1.75
NUG1	YER006W	TY1A-DR6	P0CX70	440 aa		4.11	□□□□□ -1.75
NUG1	YER006W	TY1A-ER1	P0CX71	440 aa		4.11	□□□□□ -1.75
NUG1	YER006W	TY1A-LR2	P0CX72	440 aa		4.11	□□□□□ -1.75
NUG1	YER006W	TY1A-PL	P0CX73	440 aa		4.11	□□□□□ -1.75
NUG1	YER006W	TY1A-JR1	P0CX74	440 aa		4.11	□□□□□ -1.75
NUG1	YER006W	TY1A-LR3	P0CX75	440 aa		4.11	□□□□□ -1.75
NUG1	YER006W	TY1A-ML2	P0CX76	440 aa		4.11	□□□□□ -1.75
NUG1	YER006W	CDC24	P11433	854 aa	Predicted RBP	4.11	□□□□□ -1.75
NUG1	YER006W	PRP9	P19736	530 aa	Known RBP	4.11	□□□□□ -1.75
NUG1	YER006W	SEC62	P21825	274 aa		4.11	□□□□□ -1.75
NUG1	YER006W	RPI1	P23250	407 aa	Known RBP	4.11	□□□□□ -1.75
NUG1	YER006W	HXT2	P23585	541 aa		4.11	□□□□□ -1.75
NUG1	YER006W	HIR1	P32479	840 aa		4.11	□□□□□ -1.75
NUG1	YER006W	OAF3	P36023	863 aa		4.11	□□□□□ -1.75
NUG1	YER006W	ECM31	P38122	312 aa		4.11	□□□□□ -1.75
NUG1	YER006W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	not detected
NUG1	YER006W	EGD2	P38879	174 aa	Known RBP	4.11	□□□□□ -1.75
NUG1	YER006W	OAF1	P39720	1047 aa	Predicted RBP	4.11	□□□□□ -1.75
NUG1	YER006W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	not detected
NUG1	YER006W	PAC10	P48363	199 aa		4.11	□□□□□ -1.75
NUG1	YER006W	PIP2	P52960	996 aa		4.11	□□□□□ -1.75
NUG1	YER006W	RPN14	P53196	417 aa		4.11	□□□□□ -1.75
NUG1	YER006W	DBP6	P53734	629 aa	Known RBP	4.11	□□□□□ -1.75
NUG1	YER006W	TRM44	Q02648	567 aa	Known RBP	4.11	□□□□□ -1.75
NUG1	YER006W	LGE1	Q02796	332 aa	Known RBP	4.11	□□□□□ -1.75
NUG1	YER006W	YMR279C	Q03263	540 aa		4.11	□□□□□ -1.75
NUG1	YER006W	TRS130	Q03660	1102 aa		4.11	□□□□□ -1.75
NUG1	YER006W	CRF1	Q04930	467 aa		4.11	□□□□□ -1.75
NUG1	YER006W	FMP42	Q04991	504 aa		4.11	□□□□□ -1.75
NUG1	YER006W	OSW1	Q08692	278 aa		4.11	□□□□□ -1.75
NUG1	YER006W	FEX2	Q08991	375 aa		4.11	□□□□□ -1.75
NUG1	YER006W	TY1A-GR1	Q12085	440 aa		4.11	□□□□□ -1.75
NUG1	YER006W	DIN7	Q12086	430 aa		4.11	□□□□□ -1.75
NUG1	YER006W	YPR022C	Q12139	1133 aa		4.11	□□□□□ -1.75
NUG1	YER006W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	4.11	□□□□□ -1.75
NUG1	YER006W	TY1A-OL	Q92392	440 aa	Known RBP	4.11	□□□□□ -1.75
NUG1	YER006W	PMD1	P32634	1753 aa		4.11	□□□□□ -1.75
NUG1	YER006W	TDH1	P00360	332 aa	Known RBP	4.1	□□□□□ -1.75
NUG1	YER006W	ARG3	P05150	338 aa		4.1	□□□□□ -1.75
NUG1	YER006W	KIN28	P06242	306 aa		4.1	□□□□□ -1.75
NUG1	YER006W	MET2	P08465	486 aa		4.1	□□□□□ -1.75
NUG1	YER006W	GPA1	P08539	472 aa		4.1	□□□□□ -1.75
NUG1	YER006W	ENA1	P13587	1091 aa		4.1	□□□□□ -1.75
NUG1	YER006W	MET8	P15807	274 aa		4.1	□□□□□ -1.75
NUG1	YER006W	UTR1	P21373	530 aa		4.1	□□□□□ -1.75
NUG1	YER006W	GRR1	P24814	1151 aa		4.1	□□□□□ -1.75
NUG1	YER006W	SNT1	P25357	1226 aa		4.1	□□□□□ -1.75
NUG1	YER006W	SPS22	P25380	463 aa		4.1	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 29.6 ms