RNA–Protein interactions for RNA: YDR358W

GGA1, Transcript of Golgi-localized protein with homology to gamma-adaptin, yeast

Gene GGA1, Length 1,674 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GGA1	YDR358W	YML053C	Q04978	212 aa		4.64	□□□□□ -1.67
GGA1	YDR358W	HEL2	Q05580	639 aa	Known RBP	4.64	□□□□□ -1.67
GGA1	YDR358W	LEU9	Q12166	604 aa	Known RBP	4.64	□□□□□ -1.67
GGA1	YDR358W	TAF3	Q12297	353 aa		4.64	□□□□□ -1.67
GGA1	YDR358W	SGS1	P35187	1447 aa		4.64	□□□□□ -1.67
GGA1	YDR358W	LAM4	P38800	1345 aa		4.64	□□□□□ -1.67
GGA1	YDR358W	ALG7	P07286	448 aa		4.64	□□□□□ -1.67
GGA1	YDR358W	RPC40	P07703	335 aa	Known RBP	4.64	□□□□□ -1.67
GGA1	YDR358W	WHI2	P12611	486 aa		4.64	□□□□□ -1.67
GGA1	YDR358W	PCT1	P13259	424 aa		4.64	□□□□□ -1.67
GGA1	YDR358W	IMG1	P25626	169 aa		4.64	□□□□□ -1.67
GGA1	YDR358W	YEL043W	P32618	956 aa		4.64	□□□□□ -1.67
GGA1	YDR358W	UGP1	P32861	499 aa	Known RBP	4.64	□□□□□ -1.67
GGA1	YDR358W	NTC20	P38302	140 aa	Predicted RBP	4.64	□□□□□ -1.67
GGA1	YDR358W	ARG2	P40360	574 aa		4.64	□□□□□ -1.67
GGA1	YDR358W	PTR3	P43606	678 aa		4.64	□□□□□ -1.67
GGA1	YDR358W	SMC3	P47037	1230 aa		4.64	□□□□□ -1.67
GGA1	YDR358W	URB2	P47108	1174 aa		4.64	□□□□□ -1.67
GGA1	YDR358W	MLC1	P53141	149 aa		4.64	□□□□□ -1.67
GGA1	YDR358W	VPS73	P53142	486 aa	Known RBP	4.64	□□□□□ -1.67
GGA1	YDR358W	RRP45	Q05636	305 aa	Known RBP	4.64	□□□□□ -1.67
GGA1	YDR358W	ETT1	Q08421	412 aa	Known RBP	4.64	□□□□□ -1.67
GGA1	YDR358W	VPS54	Q12071	889 aa		4.64	□□□□□ -1.67
GGA1	YDR358W	YDL007C-A	Q2V2Q0	85 aa		4.64	□□□□□ -1.67
GGA1	YDR358W	HIP1	P06775	603 aa		4.63	□□□□□ -1.67
GGA1	YDR358W	MRP13	P12686	339 aa		4.63	□□□□□ -1.67
GGA1	YDR358W	KGD1	P20967	1014 aa	Known RBP	4.63	□□□□□ -1.67
GGA1	YDR358W	IDH2	P28241	369 aa	Known RBP	4.63	□□□□□ -1.67
GGA1	YDR358W	GDA1	P32621	518 aa		4.63	□□□□□ -1.67
GGA1	YDR358W	SLM4	P38247	162 aa		4.63	□□□□□ -1.67
GGA1	YDR358W	WSS1	P38838	269 aa		4.63	□□□□□ -1.67
GGA1	YDR358W	ELO1	P39540	310 aa		4.63	□□□□□ -1.67
GGA1	YDR358W	PMT6	P42934	759 aa		4.63	□□□□□ -1.67
GGA1	YDR358W	APT1	P49435	187 aa	Known RBP	4.63	□□□□□ -1.67
GGA1	YDR358W	HST1	P53685	503 aa		4.63	□□□□□ -1.67
GGA1	YDR358W	SKO1	Q02100	647 aa		4.63	□□□□□ -1.67
GGA1	YDR358W	PDS5	Q04264	1277 aa		4.63	□□□□□ -1.67
GGA1	YDR358W	RPC11	Q04307	110 aa	Predicted RBP	4.63	□□□□□ -1.67
GGA1	YDR358W	PLM2	Q04383	521 aa		4.63	□□□□□ -1.67
GGA1	YDR358W	RLP24	Q07915	199 aa	Known RBP	4.63	□□□□□ -1.67
GGA1	YDR358W	MLH2	Q07980	695 aa		4.63	□□□□□ -1.67
GGA1	YDR358W	UAF30	Q08747	228 aa		4.63	□□□□□ -1.67
GGA1	YDR358W	FRE3	Q08905	711 aa		4.63	□□□□□ -1.67
GGA1	YDR358W	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.63	□□□□□ -1.67	not detected
GGA1	YDR358W	HRR25	P29295	494 aa	Known RBP	4.62	□□□□□ -1.67
GGA1	YDR358W	MRPL9	P31334	269 aa		4.62	□□□□□ -1.67
GGA1	YDR358W	TUL1	P36096	758 aa		4.62	□□□□□ -1.67
GGA1	YDR358W	GMH1	P36125	273 aa		4.62	□□□□□ -1.67
GGA1	YDR358W	PIM1	P36775	1133 aa		4.62	□□□□□ -1.67
GGA1	YDR358W	ICS2	P38284	255 aa		4.62	□□□□□ -1.67
GGA1	YDR358W	MSR1	P38714	643 aa		4.62	□□□□□ -1.67
GGA1	YDR358W	NAS2	P40555	220 aa		4.62	□□□□□ -1.67
GGA1	YDR358W	YGR149W	P48236	432 aa		4.62	□□□□□ -1.67
GGA1	YDR358W	FMS1	P50264	508 aa		4.62	□□□□□ -1.67
GGA1	YDR358W	YGL138C	P53122	345 aa		4.62	□□□□□ -1.67
GGA1	YDR358W	COQ6	P53318	479 aa		4.62	□□□□□ -1.67
GGA1	YDR358W	KIN4	Q01919	800 aa		4.62	□□□□□ -1.67
GGA1	YDR358W	YLR040C	Q07988	224 aa		4.62	□□□□□ -1.67
GGA1	YDR358W	AIM39	Q08223	395 aa		4.62	□□□□□ -1.67
GGA1	YDR358W	ATG9	Q12142	997 aa		4.62	□□□□□ -1.67
GGA1	YDR358W	ZPS1	Q12512	249 aa		4.62	□□□□□ -1.67
GGA1	YDR358W	PPR1	P07272	904 aa	Predicted RBP	4.61	□□□□□ -1.67
GGA1	YDR358W	RNR3	P21672	869 aa	Known RBP	4.61	□□□□□ -1.67
GGA1	YDR358W	BOS1	P25385	244 aa		4.61	□□□□□ -1.67
GGA1	YDR358W	PMI40	P29952	429 aa	Known RBP	4.61	□□□□□ -1.67
GGA1	YDR358W	MUP3	P38734	546 aa		4.61	□□□□□ -1.67
GGA1	YDR358W	FET5	P43561	622 aa		4.61	□□□□□ -1.67
GGA1	YDR358W	COS5	P47187	383 aa		4.61	□□□□□ -1.67
GGA1	YDR358W	YDR179W-A	Q03983	463 aa		4.61	□□□□□ -1.67
GGA1	YDR358W	PPM1	Q04081	328 aa		4.61	□□□□□ -1.67
GGA1	YDR358W	DBP9	Q06218	594 aa	Known RBP	4.61	□□□□□ -1.67
GGA1	YDR358W	COS7	Q07788	383 aa		4.61	□□□□□ -1.67
GGA1	YDR358W	MED2	Q12124	431 aa		4.61	□□□□□ -1.67
GGA1	YDR358W	PSY3	Q12318	242 aa		4.61	□□□□□ -1.67
GGA1	YDR358W	SRV2	P17555	526 aa	Known RBP	4.61	□□□□□ -1.67
GGA1	YDR358W	SAP1	P39955	897 aa	Known RBP	4.61	□□□□□ -1.67
GGA1	YDR358W	NET1	P47035	1189 aa		4.61	□□□□□ -1.67
GGA1	YDR358W	CDC45	Q08032	650 aa		4.61	□□□□□ -1.67
GGA1	YDR358W	AEP3	Q12089	606 aa		4.61	□□□□□ -1.67
GGA1	YDR358W	YLR278C	Q05854	1341 aa		4.6	□□□□□ -1.67
GGA1	YDR358W	ILV2	P07342	687 aa	Known RBP	4.6	□□□□□ -1.67
GGA1	YDR358W	LPD1	P09624	499 aa	Known RBP	4.6	□□□□□ -1.67
GGA1	YDR358W	PPH22	P23595	377 aa		4.6	□□□□□ -1.67
GGA1	YDR358W	TRM2	P33753	639 aa		4.6	□□□□□ -1.67
GGA1	YDR358W	YBL055C	P34220	418 aa	Predicted RBP	4.6	□□□□□ -1.67
GGA1	YDR358W	NUP133	P36161	1157 aa		4.6	□□□□□ -1.67
GGA1	YDR358W	THI2	P38141	450 aa		4.6	□□□□□ -1.67
GGA1	YDR358W	YSW1	P38280	609 aa		4.6	□□□□□ -1.67
GGA1	YDR358W	RTT105	P40063	208 aa		4.6	□□□□□ -1.67
GGA1	YDR358W	NDC80	P40460	691 aa		4.6	□□□□□ -1.67
GGA1	YDR358W	YFR020W	P43600	232 aa		4.6	□□□□□ -1.67
GGA1	YDR358W	ALT2	P52892	507 aa		4.6	□□□□□ -1.67
GGA1	YDR358W	RPT4	P53549	437 aa	Known RBP	4.6	□□□□□ -1.67
GGA1	YDR358W	SUN4	P53616	420 aa		4.6	□□□□□ -1.67
GGA1	YDR358W	WAR1	Q03631	944 aa		4.6	□□□□□ -1.67
GGA1	YDR358W	ACL4	Q03771	387 aa		4.6	□□□□□ -1.67
GGA1	YDR358W	RAD33	Q04231	177 aa		4.6	□□□□□ -1.67
GGA1	YDR358W	RTC5	Q12108	567 aa	Known RBP	4.6	□□□□□ -1.67
GGA1	YDR358W	HER1	Q12276	1246 aa		4.6	□□□□□ -1.67
GGA1	YDR358W	YDR061W	Q12298	539 aa		4.6	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms