RNA–Protein interactions for RNA: ENST00000641756.1

PHGDH-226, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,132 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-226ENST00000641756 ZNF646O15015 1829 aaPredicted RBP20.23■□□□□ 0.83
PHGDH-226ENST00000641756 SFPQP23246 707 aaKnown RBP eCLIP20.23■□□□□ 0.83
PHGDH-226ENST00000641756 ERCC5P28715 1186 aaPredicted RBP20.23■□□□□ 0.83
PHGDH-226ENST00000641756 FKBP1AP62942 108 aaKnown RBP20.23■□□□□ 0.83
PHGDH-226ENST00000641756 VSTM4Q8IW00 320 aa20.23■□□□□ 0.83
PHGDH-226ENST00000641756 ZSCAN29Q8IWY8 852 aaPredicted RBP20.23■□□□□ 0.83
PHGDH-226ENST00000641756 REXO1Q8N1G1 1221 aaKnown RBP20.23■□□□□ 0.83
PHGDH-226ENST00000641756 RASSF8Q8NHQ8 419 aa20.23■□□□□ 0.83
PHGDH-226ENST00000641756 TBCKQ8TEA7 893 aa20.23■□□□□ 0.83
PHGDH-226ENST00000641756 CAMKK2Q96RR4 588 aa20.23■□□□□ 0.83
PHGDH-226ENST00000641756 PLIN2Q99541 437 aa20.23■□□□□ 0.83
PHGDH-226ENST00000641756 EHD4Q9H223 541 aa20.23■□□□□ 0.83
PHGDH-226ENST00000641756 SIPA1L1O43166 1804 aa20.23■□□□□ 0.83
PHGDH-226ENST00000641756 GTPBP6O43824 516 aaPredicted RBP20.23■□□□□ 0.83
PHGDH-226ENST00000641756 SLC16A2P36021 539 aa20.23■□□□□ 0.83
PHGDH-226ENST00000641756 CCDC96Q2M329 555 aa20.23■□□□□ 0.83
PHGDH-226ENST00000641756 KCTD1Q719H9 257 aa20.23■□□□□ 0.83
PHGDH-226ENST00000641756 SH3BP5LQ7L8J4 393 aa20.23■□□□□ 0.83
PHGDH-226ENST00000641756 NEK8Q86SG6 692 aa20.23■□□□□ 0.83
PHGDH-226ENST00000641756 ADGRF4Q8IZF3 695 aa20.23■□□□□ 0.83
PHGDH-226ENST00000641756 PRIMPOLQ96LW4 560 aa20.23■□□□□ 0.83
PHGDH-226ENST00000641756 DISC1Q9NRI5 854 aa20.23■□□□□ 0.83
PHGDH-226ENST00000641756 MYH4Q9Y623 1939 aa20.22■□□□□ 0.83
PHGDH-226ENST00000641756 PPP1R3GB7ZBB8 358 aa20.22■□□□□ 0.83
PHGDH-226ENST00000641756 RAD21O60216 631 aa20.22■□□□□ 0.83
PHGDH-226ENST00000641756 MRIQ9BWK5 157 aa20.22■□□□□ 0.83
PHGDH-226ENST00000641756 PDGFDQ9GZP0 370 aaPredicted RBP20.22■□□□□ 0.83
PHGDH-226ENST00000641756 JMJD4Q9H9V9 463 aa20.22■□□□□ 0.83
PHGDH-226ENST00000641756 RGS17Q9UGC6 210 aaPredicted RBP20.22■□□□□ 0.83
PHGDH-226ENST00000641756 SYNRGQ9UMZ2 1314 aa20.22■□□□□ 0.83
PHGDH-226ENST00000641756 GREB1LQ9C091 1923 aaPredicted RBP20.22■□□□□ 0.83
PHGDH-226ENST00000641756 C21orf2O43822 256 aa20.21■□□□□ 0.83
PHGDH-226ENST00000641756 COBLO75128 1261 aa20.21■□□□□ 0.83
PHGDH-226ENST00000641756 GOLGA8FQ08AF8 430 aa20.21■□□□□ 0.83
PHGDH-226ENST00000641756 GOLGA8DPQ0D2H9 430 aa20.21■□□□□ 0.83
PHGDH-226ENST00000641756 POTEAQ6S8J7 498 aa20.21■□□□□ 0.83
PHGDH-226ENST00000641756 MYRIPQ8NFW9 859 aa20.21■□□□□ 0.83
PHGDH-226ENST00000641756 TRMT1Q9NXH9 659 aaKnown RBP20.21■□□□□ 0.83
PHGDH-226ENST00000641756 ESYT2A0FGR8 921 aa20.21■□□□□ 0.83
PHGDH-226ENST00000641756 LAD1O00515 517 aa20.21■□□□□ 0.83
PHGDH-226ENST00000641756 OR52Z1P0C646 297 aa20.21■□□□□ 0.83
PHGDH-226ENST00000641756 UBA7P41226 1012 aa20.21■□□□□ 0.83
PHGDH-226ENST00000641756 HDLBPQ00341 1268 aaKnown RBP20.21■□□□□ 0.83
PHGDH-226ENST00000641756 NAALADL2Q58DX5 795 aa20.21■□□□□ 0.83
PHGDH-226ENST00000641756 IDI2Q9BXS1 227 aa20.21■□□□□ 0.83
PHGDH-226ENST00000641756 hCG_1984214I3L0E3 225 aa20.2■□□□□ 0.82
PHGDH-226ENST00000641756 TNNT1P13805 278 aa20.2■□□□□ 0.82
PHGDH-226ENST00000641756 PRPHP41219 470 aa20.2■□□□□ 0.82
PHGDH-226ENST00000641756 ADCY7P51828 1080 aa20.2■□□□□ 0.82
PHGDH-226ENST00000641756 RRAGBQ5VZM2 374 aa20.2■□□□□ 0.82
PHGDH-226ENST00000641756 ZNF713Q8N859 430 aaPredicted RBP20.2■□□□□ 0.82
PHGDH-226ENST00000641756 CCDC17Q96LX7 622 aa20.2■□□□□ 0.82
PHGDH-226ENST00000641756 DHX36Q9H2U1 1008 aaKnown RBP20.2■□□□□ 0.82
PHGDH-226ENST00000641756 TDRD3Q9H7E2 651 aaKnown RBP20.2■□□□□ 0.82
PHGDH-226ENST00000641756 CTNND2Q9UQB3 1225 aa20.2■□□□□ 0.82
PHGDH-226ENST00000641756 YDJCA8MPS7 323 aa20.2■□□□□ 0.82
PHGDH-226ENST00000641756 PPIP5K2O43314 1243 aa20.2■□□□□ 0.82
PHGDH-226ENST00000641756 PPP1R11O60927 126 aaPredicted RBP20.2■□□□□ 0.82
PHGDH-226ENST00000641756 CERKLQ49MI3 558 aaPredicted RBP20.2■□□□□ 0.82
PHGDH-226ENST00000641756 SPATA1Q5VX52 437 aa20.2■□□□□ 0.82
PHGDH-226ENST00000641756 PI4KBQ9UBF8 816 aa20.2■□□□□ 0.82
PHGDH-226ENST00000641756 SERPINA10Q9UK55 444 aa20.2■□□□□ 0.82
PHGDH-226ENST00000641756 C10orf71Q711Q0 1435 aa20.19■□□□□ 0.82
PHGDH-226ENST00000641756 USP17L10C9JJH3 530 aa20.19■□□□□ 0.82
PHGDH-226ENST00000641756 RPN1P04843 607 aaKnown RBP20.19■□□□□ 0.82
PHGDH-226ENST00000641756 POTEDQ86YR6 584 aa20.19■□□□□ 0.82
PHGDH-226ENST00000641756 TRIM34Q9BYJ4 488 aa20.19■□□□□ 0.82
PHGDH-226ENST00000641756 PNMA6FA0A0J9YX94 578 aa20.18■□□□□ 0.82
PHGDH-226ENST00000641756 EEF2P13639 858 aaKnown RBP20.18■□□□□ 0.82
PHGDH-226ENST00000641756 CT47A1Q5JQC4 288 aaPredicted RBP20.18■□□□□ 0.82
PHGDH-226ENST00000641756 CCAR2Q8N163 923 aaKnown RBP20.18■□□□□ 0.82
PHGDH-226ENST00000641756 LRRC15Q8TF66 581 aa20.18■□□□□ 0.82
PHGDH-226ENST00000641756 CCSER1Q9C0I3 900 aa20.18■□□□□ 0.82
PHGDH-226ENST00000641756 TECP42680 631 aa20.18■□□□□ 0.82
PHGDH-226ENST00000641756 UBE2SQ16763 222 aa20.18■□□□□ 0.82
PHGDH-226ENST00000641756 GPATCH4Q5T3I0 446 aaKnown RBP20.18■□□□□ 0.82
PHGDH-226ENST00000641756 GDF11O95390 407 aa20.17■□□□□ 0.82
PHGDH-226ENST00000641756 CABP7Q86V35 215 aa20.17■□□□□ 0.82
PHGDH-226ENST00000641756 SEPT2Q15019 361 aa20.17■□□□□ 0.82
PHGDH-226ENST00000641756 PRMT6Q96LA8 375 aaPredicted RBP20.17■□□□□ 0.82
PHGDH-226ENST00000641756 MAPK8IP1Q9UQF2 711 aa20.17■□□□□ 0.82
PHGDH-226ENST00000641756 GDAQ9Y2T3 454 aa20.17■□□□□ 0.82
PHGDH-226ENST00000641756 RIOK3O14730 519 aaKnown RBP20.16■□□□□ 0.82
PHGDH-226ENST00000641756 DHX8Q14562 1220 aaKnown RBP20.16■□□□□ 0.82
PHGDH-226ENST00000641756 ZNF658Q5TYW1 1059 aaPredicted RBP20.16■□□□□ 0.82
PHGDH-226ENST00000641756 E4F1Q66K89 784 aaPredicted RBP20.16■□□□□ 0.82
PHGDH-226ENST00000641756 SUPT20HQ8NEM7 779 aa20.16■□□□□ 0.82
PHGDH-226ENST00000641756 ZBTB5O15062 677 aa20.15■□□□□ 0.82
PHGDH-226ENST00000641756 EDIL3O43854 480 aa20.15■□□□□ 0.82
PHGDH-226ENST00000641756 TDP2O95551 362 aa20.15■□□□□ 0.82
PHGDH-226ENST00000641756 PLCG1P19174 1290 aa20.15■□□□□ 0.82
PHGDH-226ENST00000641756 TXKP42681 527 aa20.15■□□□□ 0.82
PHGDH-226ENST00000641756 TNNI2P48788 182 aa20.15■□□□□ 0.82
PHGDH-226ENST00000641756 TSC1Q92574 1164 aa20.15■□□□□ 0.82
PHGDH-226ENST00000641756 RIC8AQ9NPQ8 531 aa20.15■□□□□ 0.82
PHGDH-226ENST00000641756 RMND1Q9NWS8 449 aa20.15■□□□□ 0.82
PHGDH-226ENST00000641756 DYNC1I1O14576 645 aa20.15■□□□□ 0.82
PHGDH-226ENST00000641756 SLC37A4O43826 429 aa20.15■□□□□ 0.82
PHGDH-226ENST00000641756 NRDCO43847 1150 aa20.15■□□□□ 0.82
PHGDH-226ENST00000641756 RBM10P98175 930 aaKnown RBP20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms