RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 DHCR24Q15392 516 aa8.88□□□□□ -0.99
NECAP1-220ENST00000639841 MINDY4Q4G0A6 757 aa8.88□□□□□ -0.99
NECAP1-220ENST00000639841 C1orf228Q6PIY5 440 aa8.88□□□□□ -0.99
NECAP1-220ENST00000639841 DTHD1Q6ZMT9 781 aa8.88□□□□□ -0.99
NECAP1-220ENST00000639841 EPM2AIP1Q7L775 607 aaPredicted RBP8.88□□□□□ -0.99
NECAP1-220ENST00000639841 PPM1KQ8N3J5 372 aa8.88□□□□□ -0.99
NECAP1-220ENST00000639841 KCNH5Q8NCM2 988 aa8.88□□□□□ -0.99
NECAP1-220ENST00000639841 PI4K2BQ8TCG2 481 aa8.88□□□□□ -0.99
NECAP1-220ENST00000639841 DCAF11Q8TEB1 546 aa8.88□□□□□ -0.99
NECAP1-220ENST00000639841 SERINC2Q96SA4 455 aa8.88□□□□□ -0.99
NECAP1-220ENST00000639841 DHRS4Q9BTZ2 278 aa8.88□□□□□ -0.99
NECAP1-220ENST00000639841 CDK19Q9BWU1 502 aa8.88□□□□□ -0.99
NECAP1-220ENST00000639841 FHDC1Q9C0D6 1143 aaPredicted RBP8.88□□□□□ -0.99
NECAP1-220ENST00000639841 FBXO2Q9UK22 296 aaPredicted RBP8.88□□□□□ -0.99
NECAP1-220ENST00000639841 FNDC3AQ9Y2H6 1198 aaKnown RBP8.88□□□□□ -0.99
NECAP1-220ENST00000639841 PCDHGB3Q9Y5G1 929 aa8.88□□□□□ -0.99
NECAP1-220ENST00000639841 DGKBQ9Y6T7 804 aa8.88□□□□□ -0.99
NECAP1-220ENST00000639841 TLL1O43897 1013 aa8.87□□□□□ -0.99
NECAP1-220ENST00000639841 GTF2A2P52657 109 aa8.87□□□□□ -0.99
NECAP1-220ENST00000639841 DDB1Q16531 1140 aa8.87□□□□□ -0.99
NECAP1-220ENST00000639841 LRRC47Q8N1G4 583 aaKnown RBP8.87□□□□□ -0.99
NECAP1-220ENST00000639841 SNRNP27Q8WVK2 155 aaKnown RBP8.87□□□□□ -0.99
NECAP1-220ENST00000639841 MARVELD3Q96A59 401 aa8.87□□□□□ -0.99
NECAP1-220ENST00000639841 KRTAP3-3Q9BYR6 98 aa8.87□□□□□ -0.99
NECAP1-220ENST00000639841 KRTAP3-2Q9BYR7 98 aa8.87□□□□□ -0.99
NECAP1-220ENST00000639841 STK32BQ9NY57 414 aa8.87□□□□□ -0.99
NECAP1-220ENST00000639841 PPIP5K1Q6PFW1 1433 aa8.87□□□□□ -0.99
NECAP1-220ENST00000639841 TRPM1Q7Z4N2 1603 aa8.86□□□□□ -0.99
NECAP1-220ENST00000639841 CHD4Q14839 1912 aa8.86□□□□□ -0.99
NECAP1-220ENST00000639841 CHRNA2Q15822 529 aa8.86□□□□□ -0.99
NECAP1-220ENST00000639841 NKAPQ8N5F7 415 aaKnown RBP8.86□□□□□ -0.99
NECAP1-220ENST00000639841 SECISBP2LQ93073 1101 aaKnown RBP8.86□□□□□ -0.99
NECAP1-220ENST00000639841 MTFR1LQ9H019 292 aa8.86□□□□□ -0.99
NECAP1-220ENST00000639841 ANTXR1Q9H6X2 564 aa8.86□□□□□ -0.99
NECAP1-220ENST00000639841 DDX21Q9NR30 783 aaKnown RBP eCLIP8.86□□□□□ -0.99
NECAP1-220ENST00000639841 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.86□□□□□ -0.99
NECAP1-220ENST00000639841 KLHL11Q9NVR0 708 aa8.86□□□□□ -0.99
NECAP1-220ENST00000639841 FRMD4BQ9Y2L6 1034 aa8.86□□□□□ -0.99
NECAP1-220ENST00000639841 RTCBQ9Y3I0 505 aaKnown RBP8.86□□□□□ -0.99
NECAP1-220ENST00000639841 RAB3GAP2Q9H2M9 1393 aa8.86□□□□□ -0.99
NECAP1-220ENST00000639841 BRINP1O60477 761 aa8.86□□□□□ -0.99
NECAP1-220ENST00000639841 AGR2O95994 175 aa8.86□□□□□ -0.99
NECAP1-220ENST00000639841 GCP02774 474 aa8.86□□□□□ -0.99
NECAP1-220ENST00000639841 TNFAIP3P21580 790 aa8.86□□□□□ -0.99
NECAP1-220ENST00000639841 ID4P47928 161 aa8.86□□□□□ -0.99
NECAP1-220ENST00000639841 RPS26P62854 115 aaKnown RBP8.86□□□□□ -0.99
NECAP1-220ENST00000639841 PTPN21Q16825 1174 aa8.86□□□□□ -0.99
NECAP1-220ENST00000639841 ABCB5Q2M3G0 1257 aa8.86□□□□□ -0.99
NECAP1-220ENST00000639841 YOD1Q5VVQ6 348 aaPredicted RBP8.86□□□□□ -0.99
NECAP1-220ENST00000639841 PPP4R3AQ6IN85 833 aa8.86□□□□□ -0.99
NECAP1-220ENST00000639841 IGF2-ASQ6U949 168 aa8.86□□□□□ -0.99
NECAP1-220ENST00000639841 KRT77Q7Z794 578 aa8.86□□□□□ -0.99
NECAP1-220ENST00000639841 CBARPQ8N350 705 aaPredicted RBP8.86□□□□□ -0.99
NECAP1-220ENST00000639841 ZNF280CQ8ND82 737 aa8.86□□□□□ -0.99
NECAP1-220ENST00000639841 ALDH8A1Q9H2A2 487 aaPredicted RBP8.86□□□□□ -0.99
NECAP1-220ENST00000639841 TCF7L1Q9HCS4 588 aa8.86□□□□□ -0.99
NECAP1-220ENST00000639841 USP6P35125 1406 aa8.85□□□□□ -0.99
NECAP1-220ENST00000639841 WDR17Q8IZU2 1322 aa8.85□□□□□ -0.99
NECAP1-220ENST00000639841 TTC21AQ8NDW8 1320 aa8.85□□□□□ -0.99
NECAP1-220ENST00000639841 ABHD14A-ACY1A0A1B0GW23 586 aa8.85□□□□□ -0.99
NECAP1-220ENST00000639841 SUSD5O60279 629 aa8.85□□□□□ -0.99
NECAP1-220ENST00000639841 CILPO75339 1184 aa8.85□□□□□ -0.99
NECAP1-220ENST00000639841 POU3F2P20265 443 aaPredicted RBP8.85□□□□□ -0.99
NECAP1-220ENST00000639841 INPP5BP32019 993 aa8.85□□□□□ -0.99
NECAP1-220ENST00000639841 GJA9P57773 515 aa8.85□□□□□ -0.99
NECAP1-220ENST00000639841 TUBB8Q3ZCM7 444 aa8.85□□□□□ -0.99
NECAP1-220ENST00000639841 JAKMIP3Q5VZ66 844 aa8.85□□□□□ -0.99
NECAP1-220ENST00000639841 CCDC84Q86UT8 332 aaPredicted RBP8.85□□□□□ -0.99
NECAP1-220ENST00000639841 CMTR1Q8N1G2 835 aaKnown RBP8.85□□□□□ -0.99
NECAP1-220ENST00000639841 JARID2Q92833 1246 aaPredicted RBP8.85□□□□□ -0.99
NECAP1-220ENST00000639841 NECAB3Q96P71 396 aaPredicted RBP8.85□□□□□ -0.99
NECAP1-220ENST00000639841 SUCOQ9UBS9 1254 aaKnown RBP8.85□□□□□ -0.99
NECAP1-220ENST00000639841 PGAP2Q9UHJ9 254 aa8.85□□□□□ -0.99
NECAP1-220ENST00000639841 DMTF1Q9Y222 760 aa8.85□□□□□ -0.99
NECAP1-220ENST00000639841 QSER1Q2KHR3 1735 aa8.85□□□□□ -0.99
NECAP1-220ENST00000639841 CENPJQ9HC77 1338 aaPredicted RBP8.85□□□□□ -0.99
NECAP1-220ENST00000639841 NHSQ6T4R5 1651 aa8.85□□□□□ -0.99
NECAP1-220ENST00000639841 SNPHO15079 494 aa8.84□□□□□ -0.99
NECAP1-220ENST00000639841 GRNP28799 593 aaKnown RBP8.84□□□□□ -0.99
NECAP1-220ENST00000639841 FAM182BQ5T319 152 aa8.84□□□□□ -0.99
NECAP1-220ENST00000639841 RASIP1Q5U651 963 aa8.84□□□□□ -0.99
NECAP1-220ENST00000639841 EHMT1Q9H9B1 1298 aa8.84□□□□□ -0.99
NECAP1-220ENST00000639841 ARHGEF4Q9NR80 690 aa8.84□□□□□ -0.99
NECAP1-220ENST00000639841 SALL4Q9UJQ4 1053 aa8.84□□□□□ -0.99
NECAP1-220ENST00000639841 CPSF1Q10570 1443 aaKnown RBP8.84□□□□□ -0.99
NECAP1-220ENST00000639841 NEMP1O14524 444 aa8.84□□□□□ -0.99
NECAP1-220ENST00000639841 PF4V1P10720 104 aa8.84□□□□□ -0.99
NECAP1-220ENST00000639841 BIRC3Q13489 604 aa8.84□□□□□ -0.99
NECAP1-220ENST00000639841 DACT2Q5SW24 774 aa8.84□□□□□ -0.99
NECAP1-220ENST00000639841 MZT2AQ6P582 158 aa8.84□□□□□ -0.99
NECAP1-220ENST00000639841 CFAP161Q6P656 301 aa8.84□□□□□ -0.99
NECAP1-220ENST00000639841 CLIP3Q96DZ5 547 aa8.84□□□□□ -0.99
NECAP1-220ENST00000639841 TCF12Q99081 682 aa8.84□□□□□ -0.99
NECAP1-220ENST00000639841 CARD10Q9BWT7 1032 aa8.84□□□□□ -0.99
NECAP1-220ENST00000639841 SLC12A5Q9H2X9 1139 aa8.84□□□□□ -0.99
NECAP1-220ENST00000639841 NLRC4Q9NPP4 1024 aa8.84□□□□□ -0.99
NECAP1-220ENST00000639841 CRTAC1Q9NQ79 661 aa8.84□□□□□ -0.99
NECAP1-220ENST00000639841 FNIP2Q9P278 1114 aa8.84□□□□□ -0.99
NECAP1-220ENST00000639841 USP54Q70EL1 1684 aa8.84□□□□□ -1
NECAP1-220ENST00000639841 COL18A1P39060 1754 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms