RNA–Protein interactions for RNA: ENST00000639794.1

SPIN3-228, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,681 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-228ENST00000639794 NT5C2P49902 561 aa19.7■□□□□ 0.74
SPIN3-228ENST00000639794 RAB11FIP4Q86YS3 637 aa19.7■□□□□ 0.74
SPIN3-228ENST00000639794 STAG2Q8N3U4 1231 aa19.7■□□□□ 0.74
SPIN3-228ENST00000639794 MYL10Q9BUA6 226 aa19.7■□□□□ 0.74
SPIN3-228ENST00000639794 CCPG1Q9ULG6 757 aa19.7■□□□□ 0.74
SPIN3-228ENST00000639794 XRCC5P13010 732 aaKnown RBP19.69■□□□□ 0.74
SPIN3-228ENST00000639794 MCM5P33992 734 aa19.69■□□□□ 0.74
SPIN3-228ENST00000639794 ADCK5Q3MIX3 580 aa19.69■□□□□ 0.74
SPIN3-228ENST00000639794 NUP133Q8WUM0 1156 aa19.69■□□□□ 0.74
SPIN3-228ENST00000639794 DDX11Q96FC9 970 aa19.69■□□□□ 0.74
SPIN3-228ENST00000639794 PLA2G6O60733 806 aa19.68■□□□□ 0.74
SPIN3-228ENST00000639794 GPATCH4Q5T3I0 446 aaKnown RBP19.68■□□□□ 0.74
SPIN3-228ENST00000639794 NFXL1Q6ZNB6 911 aa19.68■□□□□ 0.74
SPIN3-228ENST00000639794 ANKRD35Q8N283 1001 aa19.68■□□□□ 0.74
SPIN3-228ENST00000639794 DEFB118Q96PH6 123 aa19.68■□□□□ 0.74
SPIN3-228ENST00000639794 TRERF1Q96PN7 1200 aa19.68■□□□□ 0.74
SPIN3-228ENST00000639794 RNF146Q9NTX7 359 aa19.68■□□□□ 0.74
SPIN3-228ENST00000639794 ATP2A1O14983 1001 aa19.68■□□□□ 0.74
SPIN3-228ENST00000639794 REC8O95072 547 aa19.68■□□□□ 0.74
SPIN3-228ENST00000639794 CPA1P15085 419 aa19.68■□□□□ 0.74
SPIN3-228ENST00000639794 CACNB2Q08289 660 aaPredicted RBP19.68■□□□□ 0.74
SPIN3-228ENST00000639794 USH1GQ495M9 461 aa19.68■□□□□ 0.74
SPIN3-228ENST00000639794 BTNL9Q6UXG8 535 aa19.68■□□□□ 0.74
SPIN3-228ENST00000639794 IGDCC4Q8TDY8 1250 aa19.68■□□□□ 0.74
SPIN3-228ENST00000639794 RANBP17Q9H2T7 1088 aaKnown RBP19.68■□□□□ 0.74
SPIN3-228ENST00000639794 MCM3APO60318 1980 aa19.68■□□□□ 0.74
SPIN3-228ENST00000639794 RBBP6Q7Z6E9 1792 aaKnown RBP19.67■□□□□ 0.74
SPIN3-228ENST00000639794 ZNF236Q9UL36 1845 aa19.67■□□□□ 0.74
SPIN3-228ENST00000639794 FDX1P10109 184 aa19.67■□□□□ 0.74
SPIN3-228ENST00000639794 RXRAP19793 462 aa19.67■□□□□ 0.74
SPIN3-228ENST00000639794 CNGA1P29973 690 aa19.67■□□□□ 0.74
SPIN3-228ENST00000639794 CCND3P30281 292 aaPredicted RBP19.67■□□□□ 0.74
SPIN3-228ENST00000639794 COPB2P35606 906 aa19.67■□□□□ 0.74
SPIN3-228ENST00000639794 OAZ1P54368 228 aa19.67■□□□□ 0.74
SPIN3-228ENST00000639794 ASPRV1Q53RT3 343 aa19.67■□□□□ 0.74
SPIN3-228ENST00000639794 MUM1L1Q5H9M0 696 aa19.67■□□□□ 0.74
SPIN3-228ENST00000639794 MFSD14CQ5VZR4 134 aa19.67■□□□□ 0.74
SPIN3-228ENST00000639794 NEK1Q96PY6 1258 aa19.67■□□□□ 0.74
SPIN3-228ENST00000639794 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.67■□□□□ 0.74
SPIN3-228ENST00000639794 LY9Q9HBG7 655 aa19.67■□□□□ 0.74
SPIN3-228ENST00000639794 PRAMEF19Q5SWL8 479 aa19.66■□□□□ 0.74
SPIN3-228ENST00000639794 CATIPQ7Z7H3 387 aa19.66■□□□□ 0.74
SPIN3-228ENST00000639794 CCDC144CPQ8IYA2 1237 aa19.66■□□□□ 0.74
SPIN3-228ENST00000639794 ADGRF4Q8IZF3 695 aa19.66■□□□□ 0.74
SPIN3-228ENST00000639794 PIBF1Q8WXW3 757 aa19.66■□□□□ 0.74
SPIN3-228ENST00000639794 ACAD9Q9H845 621 aa19.66■□□□□ 0.74
SPIN3-228ENST00000639794 HMX1Q9NP08 348 aaPredicted RBP19.66■□□□□ 0.74
SPIN3-228ENST00000639794 SLC5A4Q9NY91 659 aa19.66■□□□□ 0.74
SPIN3-228ENST00000639794 TNRC18O15417 2968 aaPredicted RBP19.66■□□□□ 0.74
SPIN3-228ENST00000639794 KLRF2D3W0D1 207 aa19.65■□□□□ 0.74
SPIN3-228ENST00000639794 ICAM1P05362 532 aa19.65■□□□□ 0.74
SPIN3-228ENST00000639794 HOXC6P09630 235 aa19.65■□□□□ 0.74
SPIN3-228ENST00000639794 NSMFQ6X4W1 530 aa19.65■□□□□ 0.74
SPIN3-228ENST00000639794 TRMT44Q8IYL2 757 aaKnown RBP19.65■□□□□ 0.74
SPIN3-228ENST00000639794 ABRAQ8N0Z2 381 aa19.65■□□□□ 0.74
SPIN3-228ENST00000639794 U2AF1L4Q8WU68 220 aaKnown RBP19.65■□□□□ 0.74
SPIN3-228ENST00000639794 MAML3Q96JK9 1138 aa19.65■□□□□ 0.74
SPIN3-228ENST00000639794 MAD2L2Q9UI95 211 aa19.65■□□□□ 0.74
SPIN3-228ENST00000639794 CCDC69A6NI79 296 aa19.65■□□□□ 0.74
SPIN3-228ENST00000639794 SH2B2O14492 632 aaPredicted RBP19.65■□□□□ 0.74
SPIN3-228ENST00000639794 CDC37Q16543 378 aaPredicted RBP19.65■□□□□ 0.74
SPIN3-228ENST00000639794 CHST13Q8NET6 341 aa19.65■□□□□ 0.74
SPIN3-228ENST00000639794 JAKMIP1Q96N16 626 aaKnown RBP19.65■□□□□ 0.74
SPIN3-228ENST00000639794 RPTORQ8N122 1335 aa19.64■□□□□ 0.74
SPIN3-228ENST00000639794 TFRCP02786 760 aaKnown RBP19.64■□□□□ 0.73
SPIN3-228ENST00000639794 GJB1P08034 283 aa19.64■□□□□ 0.73
SPIN3-228ENST00000639794 HSPA4P34932 840 aa19.64■□□□□ 0.73
SPIN3-228ENST00000639794 CNTN2Q02246 1040 aa19.64■□□□□ 0.73
SPIN3-228ENST00000639794 ANO1Q5XXA6 986 aa19.64■□□□□ 0.73
SPIN3-228ENST00000639794 HOMER1Q86YM7 354 aa19.64■□□□□ 0.73
SPIN3-228ENST00000639794 ZNF654Q8IZM8 581 aa19.64■□□□□ 0.73
SPIN3-228ENST00000639794 SHISA4Q96DD7 197 aa19.64■□□□□ 0.73
SPIN3-228ENST00000639794 FBXO40Q9UH90 709 aa19.64■□□□□ 0.73
SPIN3-228ENST00000639794 NAP1L2Q9ULW6 460 aaPredicted RBP19.64■□□□□ 0.73
SPIN3-228ENST00000639794 SNX14Q9Y5W7 946 aa19.64■□□□□ 0.73
SPIN3-228ENST00000639794 NFIBO00712 420 aa19.63■□□□□ 0.73
SPIN3-228ENST00000639794 MLLT1Q03111 559 aaPredicted RBP19.63■□□□□ 0.73
SPIN3-228ENST00000639794 ZNF792Q3KQV3 632 aa19.63■□□□□ 0.73
SPIN3-228ENST00000639794 TMEM87BQ96K49 555 aa19.63■□□□□ 0.73
SPIN3-228ENST00000639794 PURBQ96QR8 312 aaKnown RBP19.63■□□□□ 0.73
SPIN3-228ENST00000639794 A1CFQ9NQ94 594 aaKnown RBP19.63■□□□□ 0.73
SPIN3-228ENST00000639794 DDX49Q9Y6V7 483 aaKnown RBP19.63■□□□□ 0.73
SPIN3-228ENST00000639794 TROAPQ12815 778 aa19.62■□□□□ 0.73
SPIN3-228ENST00000639794 GRM4Q14833 912 aa19.62■□□□□ 0.73
SPIN3-228ENST00000639794 TRPV1Q8NER1 839 aa19.62■□□□□ 0.73
SPIN3-228ENST00000639794 JMJD4Q9H9V9 463 aa19.62■□□□□ 0.73
SPIN3-228ENST00000639794 PAK6Q9NQU5 681 aaPredicted RBP19.62■□□□□ 0.73
SPIN3-228ENST00000639794 PDE4DIPQ5VU43 2346 aa19.62■□□□□ 0.73
SPIN3-228ENST00000639794 PTPDC1A2A3K4 754 aa19.62■□□□□ 0.73
SPIN3-228ENST00000639794 POTEB2H3BUK9 544 aa19.62■□□□□ 0.73
SPIN3-228ENST00000639794 SGPL1O95470 568 aa19.62■□□□□ 0.73
SPIN3-228ENST00000639794 GJA8P48165 433 aa19.62■□□□□ 0.73
SPIN3-228ENST00000639794 FGD1P98174 961 aa19.62■□□□□ 0.73
SPIN3-228ENST00000639794 KRT32Q14532 448 aa19.62■□□□□ 0.73
SPIN3-228ENST00000639794 QRICH1Q2TAL8 776 aa19.62■□□□□ 0.73
SPIN3-228ENST00000639794 MAP3K21Q5TCX8 1036 aa19.62■□□□□ 0.73
SPIN3-228ENST00000639794 OLFML2BQ68BL8 750 aa19.62■□□□□ 0.73
SPIN3-228ENST00000639794 CMTR1Q8N1G2 835 aaKnown RBP19.62■□□□□ 0.73
SPIN3-228ENST00000639794 PALM3A6NDB9 673 aaPredicted RBP19.61■□□□□ 0.73
SPIN3-228ENST00000639794 MYCNP04198 464 aaPredicted RBP19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms