RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 IQCA1Q86XH1 822 aa19.71■□□□□ 0.75
CACNA1A-259ENST00000638114 ACAD9Q9H845 621 aa19.71■□□□□ 0.75
CACNA1A-259ENST00000638114 RNF146Q9NTX7 359 aa19.71■□□□□ 0.75
CACNA1A-259ENST00000638114 NRBP1Q9UHY1 535 aa19.71■□□□□ 0.75
CACNA1A-259ENST00000638114 CNPY2Q9Y2B0 182 aa19.71■□□□□ 0.75
CACNA1A-259ENST00000638114 ZNF536O15090 1300 aa19.71■□□□□ 0.75
CACNA1A-259ENST00000638114 B4E1Z4 1266 aa19.7■□□□□ 0.74
CACNA1A-259ENST00000638114 DNM1LO00429 736 aa19.7■□□□□ 0.74
CACNA1A-259ENST00000638114 PDHBP11177 359 aa19.7■□□□□ 0.74
CACNA1A-259ENST00000638114 ALAS1P13196 640 aa19.7■□□□□ 0.74
CACNA1A-259ENST00000638114 NT5C2P49902 561 aa19.7■□□□□ 0.74
CACNA1A-259ENST00000638114 TAL1P17542 331 aaPredicted RBP19.69■□□□□ 0.74
CACNA1A-259ENST00000638114 TKFCQ3LXA3 575 aa19.69■□□□□ 0.74
CACNA1A-259ENST00000638114 CCDC178Q5BJE1 867 aa19.69■□□□□ 0.74
CACNA1A-259ENST00000638114 GJC2Q5T442 439 aaPredicted RBP19.69■□□□□ 0.74
CACNA1A-259ENST00000638114 SYDE2Q5VT97 1194 aa19.69■□□□□ 0.74
CACNA1A-259ENST00000638114 MSL3Q8N5Y2 521 aaKnown RBP19.69■□□□□ 0.74
CACNA1A-259ENST00000638114 ARRDC4Q8NCT1 418 aa19.69■□□□□ 0.74
CACNA1A-259ENST00000638114 TRERF1Q96PN7 1200 aa19.69■□□□□ 0.74
CACNA1A-259ENST00000638114 SENP6Q9GZR1 1112 aaPredicted RBP19.69■□□□□ 0.74
CACNA1A-259ENST00000638114 CCPG1Q9ULG6 757 aa19.69■□□□□ 0.74
CACNA1A-259ENST00000638114 KBTBD13C9JR72 458 aa19.68■□□□□ 0.74
CACNA1A-259ENST00000638114 RARBP10826 455 aa19.68■□□□□ 0.74
CACNA1A-259ENST00000638114 BTNL9Q6UXG8 535 aa19.68■□□□□ 0.74
CACNA1A-259ENST00000638114 ZNF467Q7Z7K2 595 aaPredicted RBP19.68■□□□□ 0.74
CACNA1A-259ENST00000638114 DGKHQ86XP1 1220 aa19.68■□□□□ 0.74
CACNA1A-259ENST00000638114 KRT23Q9C075 422 aa19.68■□□□□ 0.74
CACNA1A-259ENST00000638114 CNNM2Q9H8M5 875 aa19.68■□□□□ 0.74
CACNA1A-259ENST00000638114 SYNGAP1Q96PV0 1343 aa19.68■□□□□ 0.74
CACNA1A-259ENST00000638114 SMCHD1A6NHR9 2005 aa19.68■□□□□ 0.74
CACNA1A-259ENST00000638114 POTEB2H3BUK9 544 aa19.67■□□□□ 0.74
CACNA1A-259ENST00000638114 ICAM1P05362 532 aa19.67■□□□□ 0.74
CACNA1A-259ENST00000638114 ZNF865P0CJ78 1059 aaPredicted RBP19.67■□□□□ 0.74
CACNA1A-259ENST00000638114 ZNF543Q08ER8 600 aa19.67■□□□□ 0.74
CACNA1A-259ENST00000638114 LRRC26Q2I0M4 334 aa19.67■□□□□ 0.74
CACNA1A-259ENST00000638114 MAMDC4Q6UXC1 1216 aa19.67■□□□□ 0.74
CACNA1A-259ENST00000638114 ZSCAN10Q96SZ4 725 aaPredicted RBP19.67■□□□□ 0.74
CACNA1A-259ENST00000638114 RANBP17Q9H2T7 1088 aaKnown RBP19.67■□□□□ 0.74
CACNA1A-259ENST00000638114 KAT14Q9H8E8 782 aa19.67■□□□□ 0.74
CACNA1A-259ENST00000638114 A1CFQ9NQ94 594 aaKnown RBP19.67■□□□□ 0.74
CACNA1A-259ENST00000638114 XPNPEP3Q9NQH7 507 aa19.67■□□□□ 0.74
CACNA1A-259ENST00000638114 ZSWIM5Q9P217 1185 aa19.67■□□□□ 0.74
CACNA1A-259ENST00000638114 ZHX1Q9UKY1 873 aaPredicted RBP19.67■□□□□ 0.74
CACNA1A-259ENST00000638114 ZMYND8Q9ULU4 1186 aaPredicted RBP19.67■□□□□ 0.74
CACNA1A-259ENST00000638114 TRIOBPQ9H2D6 2365 aa19.66■□□□□ 0.74
CACNA1A-259ENST00000638114 SLC34A2O95436 690 aa19.66■□□□□ 0.74
CACNA1A-259ENST00000638114 SNAI1O95863 264 aaPredicted RBP19.66■□□□□ 0.74
CACNA1A-259ENST00000638114 SNHG28P0DPA3 235 aa19.66■□□□□ 0.74
CACNA1A-259ENST00000638114 AKR1A1P14550 325 aa19.66■□□□□ 0.74
CACNA1A-259ENST00000638114 CNTN2Q02246 1040 aa19.66■□□□□ 0.74
CACNA1A-259ENST00000638114 PTH1RQ03431 593 aa19.66■□□□□ 0.74
CACNA1A-259ENST00000638114 MUM1L1Q5H9M0 696 aa19.66■□□□□ 0.74
CACNA1A-259ENST00000638114 PNMA1Q8ND90 353 aa19.66■□□□□ 0.74
CACNA1A-259ENST00000638114 FGD4Q96M96 766 aa19.66■□□□□ 0.74
CACNA1A-259ENST00000638114 MCM3APO60318 1980 aa19.65■□□□□ 0.74
CACNA1A-259ENST00000638114 SGSM2O43147 1006 aa19.65■□□□□ 0.74
CACNA1A-259ENST00000638114 SYN1P17600 705 aa19.65■□□□□ 0.74
CACNA1A-259ENST00000638114 ATN1P54259 1190 aaPredicted RBP19.65■□□□□ 0.74
CACNA1A-259ENST00000638114 LRRC41Q15345 812 aa19.65■□□□□ 0.74
CACNA1A-259ENST00000638114 GPATCH4Q5T3I0 446 aaKnown RBP19.65■□□□□ 0.74
CACNA1A-259ENST00000638114 ENAHQ8N8S7 591 aaPredicted RBP19.65■□□□□ 0.74
CACNA1A-259ENST00000638114 LENG1Q96BZ8 264 aaPredicted RBP19.65■□□□□ 0.74
CACNA1A-259ENST00000638114 UBAC1Q9BSL1 405 aa19.65■□□□□ 0.74
CACNA1A-259ENST00000638114 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.65■□□□□ 0.74
CACNA1A-259ENST00000638114 RBM27Q9P2N5 1060 aaKnown RBP19.65■□□□□ 0.74
CACNA1A-259ENST00000638114 U3KPZ7 1027 aaPredicted RBP19.65■□□□□ 0.74
CACNA1A-259ENST00000638114 TNKSO95271 1327 aa19.65■□□□□ 0.74
CACNA1A-259ENST00000638114 GOLGA8HP0CJ92 632 aa19.64■□□□□ 0.73
CACNA1A-259ENST00000638114 NSMFQ6X4W1 530 aa19.64■□□□□ 0.73
CACNA1A-259ENST00000638114 CENPQQ7L2Z9 268 aaPredicted RBP19.64■□□□□ 0.73
CACNA1A-259ENST00000638114 ARMCX2Q7L311 632 aa19.64■□□□□ 0.73
CACNA1A-259ENST00000638114 FAM133AQ8N9E0 248 aa19.64■□□□□ 0.73
CACNA1A-259ENST00000638114 ANKS1AQ92625 1134 aa19.64■□□□□ 0.73
CACNA1A-259ENST00000638114 FAM184BQ9ULE4 1060 aa19.64■□□□□ 0.73
CACNA1A-259ENST00000638114 PGK1P00558 417 aa19.63■□□□□ 0.73
CACNA1A-259ENST00000638114 TRDNQ13061 729 aa19.63■□□□□ 0.73
CACNA1A-259ENST00000638114 ACVR2BQ13705 512 aa19.63■□□□□ 0.73
CACNA1A-259ENST00000638114 RNF180Q86T96 592 aa19.63■□□□□ 0.73
CACNA1A-259ENST00000638114 CCDC144CPQ8IYA2 1237 aa19.63■□□□□ 0.73
CACNA1A-259ENST00000638114 ABHD16BQ9H3Z7 469 aa19.63■□□□□ 0.73
CACNA1A-259ENST00000638114 CYP39A1Q9NYL5 469 aa19.63■□□□□ 0.73
CACNA1A-259ENST00000638114 SOWAHBA6NEL2 793 aa19.62■□□□□ 0.73
CACNA1A-259ENST00000638114 CYP21A2P08686 494 aa19.62■□□□□ 0.73
CACNA1A-259ENST00000638114 ADCYAP1R1P41586 468 aa19.62■□□□□ 0.73
CACNA1A-259ENST00000638114 IFIT1BQ5T764 474 aaKnown RBP19.62■□□□□ 0.73
CACNA1A-259ENST00000638114 FERMT2Q96AC1 680 aa19.62■□□□□ 0.73
CACNA1A-259ENST00000638114 UBA5Q9GZZ9 404 aa19.62■□□□□ 0.73
CACNA1A-259ENST00000638114 ASPRV1Q53RT3 343 aa19.61■□□□□ 0.73
CACNA1A-259ENST00000638114 CYB5R4Q7L1T6 521 aa19.61■□□□□ 0.73
CACNA1A-259ENST00000638114 PRO3102Q9H379 93 aa19.61■□□□□ 0.73
CACNA1A-259ENST00000638114 CPVLQ9H3G5 476 aa19.61■□□□□ 0.73
CACNA1A-259ENST00000638114 PNMA2Q9UL42 364 aa19.61■□□□□ 0.73
CACNA1A-259ENST00000638114 DNAH12Q6ZR08 3092 aa19.6■□□□□ 0.73
CACNA1A-259ENST00000638114 WDR19Q8NEZ3 1342 aa19.6■□□□□ 0.73
CACNA1A-259ENST00000638114 SYNRGQ9UMZ2 1314 aa19.6■□□□□ 0.73
CACNA1A-259ENST00000638114 ASB14A6NK59 587 aa19.6■□□□□ 0.73
CACNA1A-259ENST00000638114 NFIBO00712 420 aa19.6■□□□□ 0.73
CACNA1A-259ENST00000638114 RTP1P59025 263 aa19.6■□□□□ 0.73
CACNA1A-259ENST00000638114 CCDC144BQ3MJ40 725 aa19.6■□□□□ 0.73
CACNA1A-259ENST00000638114 SLC39A5Q6ZMH5 540 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms