RNA–Protein interactions for RNA: ENST00000636840.1

PNKP-226, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 117 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-226ENST00000636840 ACAD9Q9H845 621 aa9.57□□□□□ -0.88
PNKP-226ENST00000636840 UPF2Q9HAU5 1272 aaKnown RBP9.57□□□□□ -0.88
PNKP-226ENST00000636840 CCPG1Q9ULG6 757 aa9.57□□□□□ -0.88
PNKP-226ENST00000636840 NAP1L2Q9ULW6 460 aaPredicted RBP9.57□□□□□ -0.88
PNKP-226ENST00000636840 CYP46A1Q9Y6A2 500 aa9.57□□□□□ -0.88
PNKP-226ENST00000636840 CCDC196A0A1B0GTZ2 297 aa9.56□□□□□ -0.88
PNKP-226ENST00000636840 PALM3A6NDB9 673 aaPredicted RBP9.56□□□□□ -0.88
PNKP-226ENST00000636840 B4DLN1 442 aa9.56□□□□□ -0.88
PNKP-226ENST00000636840 SH2B2O14492 632 aaPredicted RBP9.56□□□□□ -0.88
PNKP-226ENST00000636840 HMGCRP04035 888 aa9.56□□□□□ -0.88
PNKP-226ENST00000636840 ICAM1P05362 532 aa9.56□□□□□ -0.88
PNKP-226ENST00000636840 HOXC6P09630 235 aa9.56□□□□□ -0.88
PNKP-226ENST00000636840 CASTP20810 708 aaKnown RBP9.56□□□□□ -0.88
PNKP-226ENST00000636840 SMARCA1P28370 1054 aa9.56□□□□□ -0.88
PNKP-226ENST00000636840 ADORA2AP29274 412 aa9.56□□□□□ -0.88
PNKP-226ENST00000636840 MRPL12P52815 198 aaKnown RBP9.56□□□□□ -0.88
PNKP-226ENST00000636840 ANAPC15P60006 121 aa9.56□□□□□ -0.88
PNKP-226ENST00000636840 GRB14Q14449 540 aa9.56□□□□□ -0.88
PNKP-226ENST00000636840 GRM4Q14833 912 aa9.56□□□□□ -0.88
PNKP-226ENST00000636840 POTEEQ6S8J3 1075 aa9.56□□□□□ -0.88
PNKP-226ENST00000636840 ADGRF4Q8IZF3 695 aa9.56□□□□□ -0.88
PNKP-226ENST00000636840 ZNF654Q8IZM8 581 aa9.56□□□□□ -0.88
PNKP-226ENST00000636840 NKX2-3Q8TAU0 364 aa9.56□□□□□ -0.88
PNKP-226ENST00000636840 SH3TC2Q8TF17 1288 aa9.56□□□□□ -0.88
PNKP-226ENST00000636840 USP6NLQ92738 828 aa9.56□□□□□ -0.88
PNKP-226ENST00000636840 ARMC5Q96C12 935 aa9.56□□□□□ -0.88
PNKP-226ENST00000636840 AGBL1Q96MI9 1066 aa9.56□□□□□ -0.88
PNKP-226ENST00000636840 APBA2Q99767 749 aa9.56□□□□□ -0.88
PNKP-226ENST00000636840 TM6SF1Q9BZW5 370 aa9.56□□□□□ -0.88
PNKP-226ENST00000636840 MAF1Q9H063 256 aa9.56□□□□□ -0.88
PNKP-226ENST00000636840 RANBP17Q9H2T7 1088 aaKnown RBP9.56□□□□□ -0.88
PNKP-226ENST00000636840 LY9Q9HBG7 655 aa9.56□□□□□ -0.88
PNKP-226ENST00000636840 DIS3Q9Y2L1 958 aaKnown RBP9.56□□□□□ -0.88
PNKP-226ENST00000636840 DOCK3Q8IZD9 2030 aa9.56□□□□□ -0.88
PNKP-226ENST00000636840 LAMA4Q16363 1823 aa9.56□□□□□ -0.88
PNKP-226ENST00000636840 POTEB2H3BUK9 544 aa9.55□□□□□ -0.88
PNKP-226ENST00000636840 ZBTB43O43298 467 aa9.55□□□□□ -0.88
PNKP-226ENST00000636840 ELNP15502 786 aa9.55□□□□□ -0.88
PNKP-226ENST00000636840 RPS6KB1P23443 525 aa9.55□□□□□ -0.88
PNKP-226ENST00000636840 SNAP25P60880 206 aa9.55□□□□□ -0.88
PNKP-226ENST00000636840 CAP1Q01518 475 aa9.55□□□□□ -0.88
PNKP-226ENST00000636840 TROAPQ12815 778 aa9.55□□□□□ -0.88
PNKP-226ENST00000636840 ADCK5Q3MIX3 580 aa9.55□□□□□ -0.88
PNKP-226ENST00000636840 RUFY3Q7L099 469 aa9.55□□□□□ -0.88
PNKP-226ENST00000636840 SGMS1Q86VZ5 419 aa9.55□□□□□ -0.88
PNKP-226ENST00000636840 FBXO11Q86XK2 927 aa9.55□□□□□ -0.88
PNKP-226ENST00000636840 MCF2L2Q86YR7 1114 aa9.55□□□□□ -0.88
PNKP-226ENST00000636840 FANCBQ8NB91 859 aa9.55□□□□□ -0.88
PNKP-226ENST00000636840 ZNF333Q96JL9 665 aa9.55□□□□□ -0.88
PNKP-226ENST00000636840 MPHOSPH6Q99547 160 aaKnown RBP9.55□□□□□ -0.88
PNKP-226ENST00000636840 AMNQ9BXJ7 453 aa9.55□□□□□ -0.88
PNKP-226ENST00000636840 LRRC2Q9BYS8 371 aa9.55□□□□□ -0.88
PNKP-226ENST00000636840 RNF208Q9H0X6 261 aa9.55□□□□□ -0.88
PNKP-226ENST00000636840 HMX1Q9NP08 348 aaPredicted RBP9.55□□□□□ -0.88
PNKP-226ENST00000636840 HOMER2Q9NSB8 354 aa9.55□□□□□ -0.88
PNKP-226ENST00000636840 RNF146Q9NTX7 359 aa9.55□□□□□ -0.88
PNKP-226ENST00000636840 RBM28Q9NW13 759 aaKnown RBP9.55□□□□□ -0.88
PNKP-226ENST00000636840 SEC63Q9UGP8 760 aaKnown RBP9.55□□□□□ -0.88
PNKP-226ENST00000636840 MAD2L2Q9UI95 211 aa9.55□□□□□ -0.88
PNKP-226ENST00000636840 MRPL11Q9Y3B7 192 aaKnown RBP9.55□□□□□ -0.88
PNKP-226ENST00000636840 PFASO15067 1338 aa9.55□□□□□ -0.88
PNKP-226ENST00000636840 CAPN15O75808 1086 aa9.54□□□□□ -0.88
PNKP-226ENST00000636840 INHAP05111 366 aa9.54□□□□□ -0.88
PNKP-226ENST00000636840 CDC37Q16543 378 aaPredicted RBP9.54□□□□□ -0.88
PNKP-226ENST00000636840 OLFML2BQ68BL8 750 aa9.54□□□□□ -0.88
PNKP-226ENST00000636840 NSMFQ6X4W1 530 aa9.54□□□□□ -0.88
PNKP-226ENST00000636840 Q6ZUG5 572 aa9.54□□□□□ -0.88
PNKP-226ENST00000636840 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.54□□□□□ -0.88
PNKP-226ENST00000636840 STAG2Q8N3U4 1231 aa9.54□□□□□ -0.88
PNKP-226ENST00000636840 MSL3Q8N5Y2 521 aaKnown RBP9.54□□□□□ -0.88
PNKP-226ENST00000636840 SAMD3Q8N6K7 520 aa9.54□□□□□ -0.88
PNKP-226ENST00000636840 RRP36Q96EU6 259 aaKnown RBP9.54□□□□□ -0.88
PNKP-226ENST00000636840 JMJD4Q9H9V9 463 aa9.54□□□□□ -0.88
PNKP-226ENST00000636840 ZSWIM6Q9HCJ5 1215 aa9.54□□□□□ -0.88
PNKP-226ENST00000636840 RIPK3Q9Y572 518 aa9.54□□□□□ -0.88
PNKP-226ENST00000636840 ABCB11O95342 1321 aa9.54□□□□□ -0.88
PNKP-226ENST00000636840 RPTORQ8N122 1335 aa9.54□□□□□ -0.88
PNKP-226ENST00000636840 MGAMO43451 1857 aa9.53□□□□□ -0.88
PNKP-226ENST00000636840 PNMA6FA0A0J9YX94 578 aa9.53□□□□□ -0.88
PNKP-226ENST00000636840 KLF18A0A0U1RQI7 1052 aa9.53□□□□□ -0.88
PNKP-226ENST00000636840 ASB14A6NK59 587 aa9.53□□□□□ -0.88
PNKP-226ENST00000636840 ZBTB5O15062 677 aa9.53□□□□□ -0.88
PNKP-226ENST00000636840 MYCP01106 439 aaPredicted RBP9.53□□□□□ -0.88
PNKP-226ENST00000636840 TFRCP02786 760 aaKnown RBP9.53□□□□□ -0.88
PNKP-226ENST00000636840 CCL5P13501 91 aa9.53□□□□□ -0.88
PNKP-226ENST00000636840 CNGA1P29973 690 aa9.53□□□□□ -0.88
PNKP-226ENST00000636840 RCAN1P53805 252 aa9.53□□□□□ -0.88
PNKP-226ENST00000636840 ANKRD1Q15327 319 aa9.53□□□□□ -0.88
PNKP-226ENST00000636840 RTN1Q16799 776 aa9.53□□□□□ -0.88
PNKP-226ENST00000636840 QRICH1Q2TAL8 776 aa9.53□□□□□ -0.88
PNKP-226ENST00000636840 USH1GQ495M9 461 aa9.53□□□□□ -0.88
PNKP-226ENST00000636840 IFFO2Q5TF58 517 aa9.53□□□□□ -0.88
PNKP-226ENST00000636840 CPLX2Q6PUV4 134 aaKnown RBP9.53□□□□□ -0.88
PNKP-226ENST00000636840 APOA5Q6Q788 366 aa9.53□□□□□ -0.88
PNKP-226ENST00000636840 RASGRP2Q7LDG7 609 aa9.53□□□□□ -0.88
PNKP-226ENST00000636840 HOMER1Q86YM7 354 aa9.53□□□□□ -0.88
PNKP-226ENST00000636840 FBXL16Q8N461 479 aa9.53□□□□□ -0.88
PNKP-226ENST00000636840 RGS22Q8NE09 1264 aa9.53□□□□□ -0.88
PNKP-226ENST00000636840 NPLOC4Q8TAT6 608 aa9.53□□□□□ -0.88
PNKP-226ENST00000636840 BRF1Q92994 677 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms