RNA–Protein interactions for RNA: ENST00000636271.1

CHRNA7-212, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 1,974 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-212ENST00000636271 USP17L2Q6R6M4 530 aa17.89■□□□□ 0.45
CHRNA7-212ENST00000636271 TMTC3Q6ZXV5 915 aa17.89■□□□□ 0.45
CHRNA7-212ENST00000636271 CCDC186Q7Z3E2 898 aa17.89■□□□□ 0.45
CHRNA7-212ENST00000636271 CTCFLQ8NI51 663 aaPredicted RBP17.89■□□□□ 0.45
CHRNA7-212ENST00000636271 ACER1Q8TDN7 264 aa17.89■□□□□ 0.45
CHRNA7-212ENST00000636271 ZKSCAN4Q969J2 545 aaPredicted RBP17.89■□□□□ 0.45
CHRNA7-212ENST00000636271 KLRG1Q96E93 195 aa17.89■□□□□ 0.45
CHRNA7-212ENST00000636271 PHF20Q9BVI0 1012 aa17.89■□□□□ 0.45
CHRNA7-212ENST00000636271 VPS54Q9P1Q0 977 aa17.89■□□□□ 0.45
CHRNA7-212ENST00000636271 R3HCC1Q9Y3T6 440 aaKnown RBP17.89■□□□□ 0.45
CHRNA7-212ENST00000636271 V9GY48 417 aaPredicted RBP17.89■□□□□ 0.45
CHRNA7-212ENST00000636271 CTNND1O60716 968 aaKnown RBP17.88■□□□□ 0.45
CHRNA7-212ENST00000636271 GRM4Q14833 912 aa17.88■□□□□ 0.45
CHRNA7-212ENST00000636271 KIAA1524Q8TCG1 905 aa17.88■□□□□ 0.45
CHRNA7-212ENST00000636271 SHISA4Q96DD7 197 aa17.88■□□□□ 0.45
CHRNA7-212ENST00000636271 HOOK2Q96ED9 719 aa17.88■□□□□ 0.45
CHRNA7-212ENST00000636271 CDCA5Q96FF9 252 aa17.88■□□□□ 0.45
CHRNA7-212ENST00000636271 WRNIP1Q96S55 665 aa17.88■□□□□ 0.45
CHRNA7-212ENST00000636271 SPTLC3Q9NUV7 552 aa17.88■□□□□ 0.45
CHRNA7-212ENST00000636271 KCNH3Q9ULD8 1083 aa17.88■□□□□ 0.45
CHRNA7-212ENST00000636271 CEP131Q9UPN4 1083 aa17.88■□□□□ 0.45
CHRNA7-212ENST00000636271 USP2O75604 605 aaPredicted RBP17.88■□□□□ 0.45
CHRNA7-212ENST00000636271 ASNSP08243 561 aa17.88■□□□□ 0.45
CHRNA7-212ENST00000636271 PDHBP11177 359 aa17.88■□□□□ 0.45
CHRNA7-212ENST00000636271 PTPREP23469 700 aa17.88■□□□□ 0.45
CHRNA7-212ENST00000636271 SLC35G1Q2M3R5 365 aa17.88■□□□□ 0.45
CHRNA7-212ENST00000636271 SRBD1Q8N5C6 995 aaKnown RBP17.88■□□□□ 0.45
CHRNA7-212ENST00000636271 TUBE1Q9UJT0 475 aa17.88■□□□□ 0.45
CHRNA7-212ENST00000636271 FBXO2Q9UK22 296 aaPredicted RBP17.88■□□□□ 0.45
CHRNA7-212ENST00000636271 PCDHB6Q9Y5E3 794 aa17.88■□□□□ 0.45
CHRNA7-212ENST00000636271 CNTNAP5Q8WYK1 1306 aa17.87■□□□□ 0.45
CHRNA7-212ENST00000636271 PALM3A6NDB9 673 aaPredicted RBP17.87■□□□□ 0.45
CHRNA7-212ENST00000636271 BIN1O00499 593 aa17.87■□□□□ 0.45
CHRNA7-212ENST00000636271 TPM2P07951 284 aa17.87■□□□□ 0.45
CHRNA7-212ENST00000636271 PRKCSHP14314 528 aaPredicted RBP17.87■□□□□ 0.45
CHRNA7-212ENST00000636271 KRT2P35908 639 aa17.87■□□□□ 0.45
CHRNA7-212ENST00000636271 FMR1Q06787 632 aaKnown RBP eCLIP17.87■□□□□ 0.45
CHRNA7-212ENST00000636271 CPVLQ9H3G5 476 aa17.87■□□□□ 0.45
CHRNA7-212ENST00000636271 NRBP1Q9UHY1 535 aa17.87■□□□□ 0.45
CHRNA7-212ENST00000636271 PYCARDQ9ULZ3 195 aa17.87■□□□□ 0.45
CHRNA7-212ENST00000636271 hCG_1642624A0A1W2PR95 340 aa17.86■□□□□ 0.45
CHRNA7-212ENST00000636271 SNHG28P0DPA3 235 aa17.86■□□□□ 0.45
CHRNA7-212ENST00000636271 PPP4R3BQ5MIZ7 849 aa17.86■□□□□ 0.45
CHRNA7-212ENST00000636271 C17orf53Q8N3J3 647 aaPredicted RBP17.86■□□□□ 0.45
CHRNA7-212ENST00000636271 TRAF5O00463 557 aa17.86■□□□□ 0.45
CHRNA7-212ENST00000636271 KIF5BP33176 963 aa17.86■□□□□ 0.45
CHRNA7-212ENST00000636271 KRBA2Q6ZNG9 492 aa17.86■□□□□ 0.45
CHRNA7-212ENST00000636271 ZNF579Q8NAF0 562 aaKnown RBP17.86■□□□□ 0.45
CHRNA7-212ENST00000636271 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.86■□□□□ 0.45
CHRNA7-212ENST00000636271 BRMS1Q9HCU9 246 aa17.86■□□□□ 0.45
CHRNA7-212ENST00000636271 FAM13BQ9NYF5 915 aa17.86■□□□□ 0.45
CHRNA7-212ENST00000636271 FRMPD2Q68DX3 1309 aaPredicted RBP17.85■□□□□ 0.45
CHRNA7-212ENST00000636271 F5H6K3 240 aa17.85■□□□□ 0.45
CHRNA7-212ENST00000636271 RAD21O60216 631 aa17.85■□□□□ 0.45
CHRNA7-212ENST00000636271 PARP1P09874 1014 aaKnown RBP17.85■□□□□ 0.45
CHRNA7-212ENST00000636271 KLRC3Q07444 240 aa17.85■□□□□ 0.45
CHRNA7-212ENST00000636271 LONRF3Q496Y0 759 aa17.85■□□□□ 0.45
CHRNA7-212ENST00000636271 KIAA1755Q5JYT7 1200 aa17.85■□□□□ 0.45
CHRNA7-212ENST00000636271 MOB2Q70IA6 237 aa17.85■□□□□ 0.45
CHRNA7-212ENST00000636271 ELOA2Q8IYF1 753 aaPredicted RBP17.85■□□□□ 0.45
CHRNA7-212ENST00000636271 CNNM3Q8NE01 707 aa17.85■□□□□ 0.45
CHRNA7-212ENST00000636271 MORC2Q9Y6X9 1032 aaPredicted RBP17.85■□□□□ 0.45
CHRNA7-212ENST00000636271 CYTH3O43739 400 aa17.84■□□□□ 0.45
CHRNA7-212ENST00000636271 PNOCQ13519 176 aa17.84■□□□□ 0.45
CHRNA7-212ENST00000636271 DNTTIP2Q5QJE6 756 aaKnown RBP17.84■□□□□ 0.45
CHRNA7-212ENST00000636271 SCYL3Q8IZE3 742 aa17.84■□□□□ 0.45
CHRNA7-212ENST00000636271 TMX2Q9Y320 296 aa17.84■□□□□ 0.45
CHRNA7-212ENST00000636271 SRPRBQ9Y5M8 271 aaKnown RBP17.84■□□□□ 0.45
CHRNA7-212ENST00000636271 TRIM75PA6NK02 468 aa17.84■□□□□ 0.45
CHRNA7-212ENST00000636271 KLRF2D3W0D1 207 aa17.84■□□□□ 0.45
CHRNA7-212ENST00000636271 NDUFB10O96000 172 aa17.84■□□□□ 0.45
CHRNA7-212ENST00000636271 ATP2B1P20020 1258 aa17.84■□□□□ 0.45
CHRNA7-212ENST00000636271 GRIN1Q05586 938 aa17.84■□□□□ 0.45
CHRNA7-212ENST00000636271 SPECC1Q5M775 1068 aa17.84■□□□□ 0.45
CHRNA7-212ENST00000636271 SLFN13Q68D06 897 aa17.84■□□□□ 0.45
CHRNA7-212ENST00000636271 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.84■□□□□ 0.45
CHRNA7-212ENST00000636271 KCTD1Q719H9 257 aa17.84■□□□□ 0.45
CHRNA7-212ENST00000636271 SPICE1Q8N0Z3 855 aa17.84■□□□□ 0.45
CHRNA7-212ENST00000636271 ARHGEF10LQ9HCE6 1279 aa17.84■□□□□ 0.45
CHRNA7-212ENST00000636271 FAM205CA6NFA0 338 aa17.83■□□□□ 0.44
CHRNA7-212ENST00000636271 SMTNL1A8MU46 457 aa17.83■□□□□ 0.44
CHRNA7-212ENST00000636271 TPM4P67936 248 aa17.83■□□□□ 0.44
CHRNA7-212ENST00000636271 ZNF543Q08ER8 600 aa17.83■□□□□ 0.44
CHRNA7-212ENST00000636271 CCDC144BQ3MJ40 725 aa17.83■□□□□ 0.44
CHRNA7-212ENST00000636271 TTBK2Q6IQ55 1244 aa17.83■□□□□ 0.44
CHRNA7-212ENST00000636271 GMCL1P1Q8NEA9 526 aa17.83■□□□□ 0.44
CHRNA7-212ENST00000636271 NUP88Q99567 741 aaPredicted RBP17.83■□□□□ 0.44
CHRNA7-212ENST00000636271 UBA5Q9GZZ9 404 aa17.83■□□□□ 0.44
CHRNA7-212ENST00000636271 GPCPD1Q9NPB8 672 aa17.83■□□□□ 0.44
CHRNA7-212ENST00000636271 HOOK1Q9UJC3 728 aaKnown RBP17.83■□□□□ 0.44
CHRNA7-212ENST00000636271 PPP1R12BO60237 982 aaPredicted RBP17.82■□□□□ 0.44
CHRNA7-212ENST00000636271 SCG2P13521 617 aa17.82■□□□□ 0.44
CHRNA7-212ENST00000636271 PTPRAP18433 802 aa17.82■□□□□ 0.44
CHRNA7-212ENST00000636271 LRMPQ12912 555 aa17.82■□□□□ 0.44
CHRNA7-212ENST00000636271 NPY5RQ15761 445 aa17.82■□□□□ 0.44
CHRNA7-212ENST00000636271 ZYXQ15942 572 aaKnown RBP17.82■□□□□ 0.44
CHRNA7-212ENST00000636271 EARS2Q5JPH6 523 aaKnown RBP17.82■□□□□ 0.44
CHRNA7-212ENST00000636271 LDHDQ86WU2 507 aa17.82■□□□□ 0.44
CHRNA7-212ENST00000636271 MYH4Q9Y623 1939 aa17.82■□□□□ 0.44
CHRNA7-212ENST00000636271 IKBKBO14920 756 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms