RNA–Protein interactions for RNA: ENST00000636022.1

CACNA1A-222, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 552 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-222ENST00000636022 PHF24Q9UPV7 400 aa8.68□□□□□ -1.02
CACNA1A-222ENST00000636022 ZNF536O15090 1300 aa8.68□□□□□ -1.02
CACNA1A-222ENST00000636022 SPTBN5Q9NRC6 3674 aaKnown RBP8.68□□□□□ -1.02
CACNA1A-222ENST00000636022 TSPY2A6NKD2 308 aa8.67□□□□□ -1.02
CACNA1A-222ENST00000636022 ADAMTS4O75173 837 aa8.67□□□□□ -1.02
CACNA1A-222ENST00000636022 ZMYM6O95789 1325 aa8.67□□□□□ -1.02
CACNA1A-222ENST00000636022 PGK1P00558 417 aa8.67□□□□□ -1.02
CACNA1A-222ENST00000636022 FDX1P10109 184 aa8.67□□□□□ -1.02
CACNA1A-222ENST00000636022 HSPD1P10809 573 aaKnown RBP8.67□□□□□ -1.02
CACNA1A-222ENST00000636022 AKR1A1P14550 325 aa8.67□□□□□ -1.02
CACNA1A-222ENST00000636022 SLC1A4P43007 532 aa8.67□□□□□ -1.02
CACNA1A-222ENST00000636022 NUCB1Q02818 461 aa8.67□□□□□ -1.02
CACNA1A-222ENST00000636022 NMIQ13287 307 aaPredicted RBP8.67□□□□□ -1.02
CACNA1A-222ENST00000636022 TRIM60Q495X7 471 aa8.67□□□□□ -1.02
CACNA1A-222ENST00000636022 PPP4R3BQ5MIZ7 849 aa8.67□□□□□ -1.02
CACNA1A-222ENST00000636022 CCSAPQ6IQ19 270 aaPredicted RBP8.67□□□□□ -1.02
CACNA1A-222ENST00000636022 RCSD1Q6JBY9 416 aa8.67□□□□□ -1.02
CACNA1A-222ENST00000636022 RASGRP2Q7LDG7 609 aa8.67□□□□□ -1.02
CACNA1A-222ENST00000636022 ZNF589Q86UQ0 364 aaPredicted RBP8.67□□□□□ -1.02
CACNA1A-222ENST00000636022 FAM160B2Q86V87 743 aa8.67□□□□□ -1.02
CACNA1A-222ENST00000636022 PLEKHM2Q8IWE5 1019 aa8.67□□□□□ -1.02
CACNA1A-222ENST00000636022 ANKRD35Q8N283 1001 aa8.67□□□□□ -1.02
CACNA1A-222ENST00000636022 CHURC1Q8WUH1 139 aa8.67□□□□□ -1.02
CACNA1A-222ENST00000636022 FERMT2Q96AC1 680 aa8.67□□□□□ -1.02
CACNA1A-222ENST00000636022 LENG1Q96BZ8 264 aaPredicted RBP8.67□□□□□ -1.02
CACNA1A-222ENST00000636022 AGBL1Q96MI9 1066 aa8.67□□□□□ -1.02
CACNA1A-222ENST00000636022 YTHDC1Q96MU7 727 aaKnown RBP8.67□□□□□ -1.02
CACNA1A-222ENST00000636022 KATNBL1Q9H079 304 aa8.67□□□□□ -1.02
CACNA1A-222ENST00000636022 RWDD1Q9H446 243 aaPredicted RBP8.67□□□□□ -1.02
CACNA1A-222ENST00000636022 OSBPL3Q9H4L5 887 aa8.67□□□□□ -1.02
CACNA1A-222ENST00000636022 FBXO40Q9UH90 709 aa8.67□□□□□ -1.02
CACNA1A-222ENST00000636022 STX8Q9UNK0 236 aa8.67□□□□□ -1.02
CACNA1A-222ENST00000636022 CNPY2Q9Y2B0 182 aa8.67□□□□□ -1.02
CACNA1A-222ENST00000636022 ATP11BQ9Y2G3 1177 aa8.67□□□□□ -1.02
CACNA1A-222ENST00000636022 CHD7Q9P2D1 2997 aa8.67□□□□□ -1.02
CACNA1A-222ENST00000636022 SYNRGQ9UMZ2 1314 aa8.66□□□□□ -1.02
CACNA1A-222ENST00000636022 TRIM43BA6NCK2 446 aa8.66□□□□□ -1.02
CACNA1A-222ENST00000636022 ADCY6O43306 1168 aa8.66□□□□□ -1.02
CACNA1A-222ENST00000636022 RANBP6O60518 1105 aaKnown RBP8.66□□□□□ -1.02
CACNA1A-222ENST00000636022 SLC4A3P48751 1232 aa8.66□□□□□ -1.02
CACNA1A-222ENST00000636022 CNTN2Q02246 1040 aa8.66□□□□□ -1.02
CACNA1A-222ENST00000636022 ACVR2BQ13705 512 aa8.66□□□□□ -1.02
CACNA1A-222ENST00000636022 B4GALNT3Q6L9W6 998 aa8.66□□□□□ -1.02
CACNA1A-222ENST00000636022 KCTD1Q719H9 257 aa8.66□□□□□ -1.02
CACNA1A-222ENST00000636022 SH3RF1Q7Z6J0 888 aa8.66□□□□□ -1.02
CACNA1A-222ENST00000636022 RNF180Q86T96 592 aa8.66□□□□□ -1.02
CACNA1A-222ENST00000636022 CHD1LQ86WJ1 897 aa8.66□□□□□ -1.02
CACNA1A-222ENST00000636022 PIP4P2Q8N4L2 257 aa8.66□□□□□ -1.02
CACNA1A-222ENST00000636022 FAM133AQ8N9E0 248 aa8.66□□□□□ -1.02
CACNA1A-222ENST00000636022 KLHDC9Q8NEP7 349 aa8.66□□□□□ -1.02
CACNA1A-222ENST00000636022 EXOC6Q8TAG9 804 aa8.66□□□□□ -1.02
CACNA1A-222ENST00000636022 TRIM43Q96BQ3 446 aaPredicted RBP8.66□□□□□ -1.02
CACNA1A-222ENST00000636022 CHMP4CQ96CF2 233 aa8.66□□□□□ -1.02
CACNA1A-222ENST00000636022 TMEM47Q9BQJ4 181 aa8.66□□□□□ -1.02
CACNA1A-222ENST00000636022 ACAD9Q9H845 621 aa8.66□□□□□ -1.02
CACNA1A-222ENST00000636022 A1CFQ9NQ94 594 aaKnown RBP8.66□□□□□ -1.02
CACNA1A-222ENST00000636022 PDLIM7Q9NR12 457 aa8.66□□□□□ -1.02
CACNA1A-222ENST00000636022 HOMER2Q9NSB8 354 aa8.66□□□□□ -1.02
CACNA1A-222ENST00000636022 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.66□□□□□ -1.02
CACNA1A-222ENST00000636022 FAM184BQ9ULE4 1060 aa8.66□□□□□ -1.02
CACNA1A-222ENST00000636022 PRR12Q9ULL5 1215 aa8.66□□□□□ -1.02
CACNA1A-222ENST00000636022 CTDP1Q9Y5B0 961 aaPredicted RBP8.66□□□□□ -1.02
CACNA1A-222ENST00000636022 TRANK1O15050 2925 aa8.66□□□□□ -1.02
CACNA1A-222ENST00000636022 LCTP09848 1927 aa8.66□□□□□ -1.02
CACNA1A-222ENST00000636022 ASTN1O14525 1302 aa8.65□□□□□ -1.02
CACNA1A-222ENST00000636022 CCDC171Q6TFL3 1326 aa8.65□□□□□ -1.02
CACNA1A-222ENST00000636022 A0A1W2PQ45 241 aaPredicted RBP8.65□□□□□ -1.02
CACNA1A-222ENST00000636022 A0A1W2PQY0 241 aa8.65□□□□□ -1.02
CACNA1A-222ENST00000636022 SOWAHBA6NEL2 793 aa8.65□□□□□ -1.02
CACNA1A-222ENST00000636022 TRIM6-TRIM34B2RNG4 842 aa8.65□□□□□ -1.02
CACNA1A-222ENST00000636022 DUSP11O75319 330 aaKnown RBP8.65□□□□□ -1.02
CACNA1A-222ENST00000636022 SDSP20132 328 aa8.65□□□□□ -1.02
CACNA1A-222ENST00000636022 ACLYP53396 1101 aa8.65□□□□□ -1.02
CACNA1A-222ENST00000636022 SNAP25P60880 206 aa8.65□□□□□ -1.02
CACNA1A-222ENST00000636022 TLE2Q04725 743 aa8.65□□□□□ -1.02
CACNA1A-222ENST00000636022 TKFCQ3LXA3 575 aa8.65□□□□□ -1.02
CACNA1A-222ENST00000636022 CCDC144BQ3MJ40 725 aa8.65□□□□□ -1.02
CACNA1A-222ENST00000636022 BTNL9Q6UXG8 535 aa8.65□□□□□ -1.02
CACNA1A-222ENST00000636022 Q7L0L9 218 aa8.65□□□□□ -1.02
CACNA1A-222ENST00000636022 CCDC144CPQ8IYA2 1237 aa8.65□□□□□ -1.02
CACNA1A-222ENST00000636022 DCAF4Q8WV16 495 aa8.65□□□□□ -1.02
CACNA1A-222ENST00000636022 LBHD1Q9BQE6 289 aaPredicted RBP8.65□□□□□ -1.02
CACNA1A-222ENST00000636022 TSEN34Q9BSV6 310 aaKnown RBP8.65□□□□□ -1.02
CACNA1A-222ENST00000636022 ABHD16BQ9H3Z7 469 aa8.65□□□□□ -1.02
CACNA1A-222ENST00000636022 RNF146Q9NTX7 359 aa8.65□□□□□ -1.02
CACNA1A-222ENST00000636022 TCP11L1Q9NUJ3 509 aa8.65□□□□□ -1.02
CACNA1A-222ENST00000636022 ZHX1Q9UKY1 873 aaPredicted RBP8.65□□□□□ -1.02
CACNA1A-222ENST00000636022 MYADML2A6NDP7 307 aa8.64□□□□□ -1.03
CACNA1A-222ENST00000636022 MOXD2PA6NHM9 499 aa8.64□□□□□ -1.03
CACNA1A-222ENST00000636022 POTEB2H3BUK9 544 aa8.64□□□□□ -1.03
CACNA1A-222ENST00000636022 CTAGE5O15320 804 aa8.64□□□□□ -1.03
CACNA1A-222ENST00000636022 PRR29P0C7W0 189 aa8.64□□□□□ -1.03
CACNA1A-222ENST00000636022 TOP1P11387 765 aaKnown RBP8.64□□□□□ -1.03
CACNA1A-222ENST00000636022 PCP11498 1178 aaKnown RBP8.64□□□□□ -1.03
CACNA1A-222ENST00000636022 ITGB8P26012 769 aa8.64□□□□□ -1.03
CACNA1A-222ENST00000636022 CST5P28325 142 aaPredicted RBP8.64□□□□□ -1.03
CACNA1A-222ENST00000636022 GJA9P57773 515 aa8.64□□□□□ -1.03
CACNA1A-222ENST00000636022 HAND2P61296 217 aa8.64□□□□□ -1.03
CACNA1A-222ENST00000636022 NKX3-2P78367 333 aa8.64□□□□□ -1.03
CACNA1A-222ENST00000636022 IRX5P78411 483 aaPredicted RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms