RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 CCDC17Q96LX7 622 aa21.96■■□□□ 1.11
CLN6-212ENST00000636020 TRPV6Q9H1D0 765 aa21.96■■□□□ 1.11
CLN6-212ENST00000636020 GRIN2DO15399 1336 aa21.96■■□□□ 1.11
CLN6-212ENST00000636020 BRWD1Q9NSI6 2320 aa21.96■■□□□ 1.11
CLN6-212ENST00000636020 CABYRO75952 493 aa21.95■■□□□ 1.1
CLN6-212ENST00000636020 TTLL4Q14679 1199 aa21.95■■□□□ 1.1
CLN6-212ENST00000636020 FAM83BQ5T0W9 1011 aa21.95■■□□□ 1.1
CLN6-212ENST00000636020 SNRNP48Q6IEG0 339 aaKnown RBP21.95■■□□□ 1.1
CLN6-212ENST00000636020 EAF2Q96CJ1 260 aaPredicted RBP21.95■■□□□ 1.1
CLN6-212ENST00000636020 SCLYQ96I15 445 aa21.95■■□□□ 1.1
CLN6-212ENST00000636020 AGBL1Q96MI9 1066 aa21.95■■□□□ 1.1
CLN6-212ENST00000636020 KATNBL1Q9H079 304 aa21.95■■□□□ 1.1
CLN6-212ENST00000636020 B4GALT4O60513 344 aa21.94■■□□□ 1.1
CLN6-212ENST00000636020 SURF6O75683 361 aaKnown RBP21.94■■□□□ 1.1
CLN6-212ENST00000636020 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.94■■□□□ 1.1
CLN6-212ENST00000636020 ARMCX2Q7L311 632 aa21.94■■□□□ 1.1
CLN6-212ENST00000636020 SSH3Q8TE77 659 aa21.94■■□□□ 1.1
CLN6-212ENST00000636020 SEZ6LQ9BYH1 1024 aa21.94■■□□□ 1.1
CLN6-212ENST00000636020 ASTN1O14525 1302 aa21.94■■□□□ 1.1
CLN6-212ENST00000636020 RARSP54136 660 aaKnown RBP21.93■■□□□ 1.1
CLN6-212ENST00000636020 TAP1Q03518 808 aa21.93■■□□□ 1.1
CLN6-212ENST00000636020 ARNTL2Q8WYA1 636 aa21.93■■□□□ 1.1
CLN6-212ENST00000636020 GOPCQ9HD26 462 aa21.93■■□□□ 1.1
CLN6-212ENST00000636020 MYH8P13535 1937 aa21.92■■□□□ 1.1
CLN6-212ENST00000636020 ARHGEF15O94989 841 aa21.92■■□□□ 1.1
CLN6-212ENST00000636020 PFKMP08237 780 aa21.92■■□□□ 1.1
CLN6-212ENST00000636020 KANSL2Q9H9L4 492 aa21.92■■□□□ 1.1
CLN6-212ENST00000636020 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.91■■□□□ 1.1
CLN6-212ENST00000636020 ATP2A1O14983 1001 aa21.91■■□□□ 1.1
CLN6-212ENST00000636020 PDE6AP16499 860 aa21.91■■□□□ 1.1
CLN6-212ENST00000636020 CDK8P49336 464 aa21.91■■□□□ 1.1
CLN6-212ENST00000636020 ATP8B2P98198 1209 aa21.91■■□□□ 1.1
CLN6-212ENST00000636020 TNFAIP2Q03169 654 aa21.91■■□□□ 1.1
CLN6-212ENST00000636020 GRB10Q13322 594 aa21.91■■□□□ 1.1
CLN6-212ENST00000636020 SLC9C2Q5TAH2 1124 aa21.91■■□□□ 1.1
CLN6-212ENST00000636020 SLF1Q9BQI6 1058 aa21.91■■□□□ 1.1
CLN6-212ENST00000636020 GNEQ9Y223 722 aaKnown RBP21.91■■□□□ 1.1
CLN6-212ENST00000636020 NOP58Q9Y2X3 529 aaKnown RBP21.91■■□□□ 1.1
CLN6-212ENST00000636020 RAD21O60216 631 aa21.9■■□□□ 1.1
CLN6-212ENST00000636020 FSCN1Q16658 493 aaKnown RBP21.9■■□□□ 1.1
CLN6-212ENST00000636020 CCDC144CPQ8IYA2 1237 aa21.9■■□□□ 1.1
CLN6-212ENST00000636020 LCORLQ8N3X6 602 aa21.9■■□□□ 1.1
CLN6-212ENST00000636020 LPXNO60711 386 aa21.89■■□□□ 1.09
CLN6-212ENST00000636020 BCAR3O75815 825 aa21.89■■□□□ 1.09
CLN6-212ENST00000636020 SLC4A3P48751 1232 aa21.89■■□□□ 1.09
CLN6-212ENST00000636020 NHLH1Q02575 133 aa21.89■■□□□ 1.09
CLN6-212ENST00000636020 NOL8Q76FK4 1167 aaKnown RBP21.89■■□□□ 1.09
CLN6-212ENST00000636020 CPXCR1Q8N123 301 aa21.89■■□□□ 1.09
CLN6-212ENST00000636020 ANKRD35Q8N283 1001 aa21.89■■□□□ 1.09
CLN6-212ENST00000636020 PHOSPHO2Q8TCD6 241 aa21.89■■□□□ 1.09
CLN6-212ENST00000636020 NUP88Q99567 741 aaPredicted RBP21.89■■□□□ 1.09
CLN6-212ENST00000636020 TNNQ9UQP3 1299 aa21.89■■□□□ 1.09
CLN6-212ENST00000636020 ZNF532Q9HCE3 1301 aa21.88■■□□□ 1.09
CLN6-212ENST00000636020 TCRBV5S4A2TA0A5A2 114 aa21.88■■□□□ 1.09
CLN6-212ENST00000636020 TRIM27P14373 513 aa21.88■■□□□ 1.09
CLN6-212ENST00000636020 C12orf60Q5U649 245 aa21.88■■□□□ 1.09
CLN6-212ENST00000636020 C16orf86Q6ZW13 317 aa21.88■■□□□ 1.09
CLN6-212ENST00000636020 TLK2Q86UE8 772 aa21.88■■□□□ 1.09
CLN6-212ENST00000636020 PRPF38AQ8NAV1 312 aaKnown RBP21.88■■□□□ 1.09
CLN6-212ENST00000636020 SLC9A7Q96T83 725 aa21.88■■□□□ 1.09
CLN6-212ENST00000636020 CYP2D7A0A087X1C5 515 aa21.87■■□□□ 1.09
CLN6-212ENST00000636020 PSMC6P62333 389 aa21.87■■□□□ 1.09
CLN6-212ENST00000636020 TTF1Q15361 905 aaPredicted RBP21.87■■□□□ 1.09
CLN6-212ENST00000636020 DEFB128Q7Z7B8 93 aa21.87■■□□□ 1.09
CLN6-212ENST00000636020 FAM178BQ8IXR5 827 aa21.87■■□□□ 1.09
CLN6-212ENST00000636020 GJD3Q8N144 294 aa21.87■■□□□ 1.09
CLN6-212ENST00000636020 ALDH8A1Q9H2A2 487 aaPredicted RBP21.87■■□□□ 1.09
CLN6-212ENST00000636020 FBXO40Q9UH90 709 aa21.87■■□□□ 1.09
CLN6-212ENST00000636020 DYNC1LI2O43237 492 aaPredicted RBP21.86■■□□□ 1.09
CLN6-212ENST00000636020 PRKAB2O43741 272 aa21.86■■□□□ 1.09
CLN6-212ENST00000636020 ZEB2O60315 1214 aa21.86■■□□□ 1.09
CLN6-212ENST00000636020 ZBED4O75132 1171 aa21.86■■□□□ 1.09
CLN6-212ENST00000636020 ACTN1P12814 892 aa21.86■■□□□ 1.09
CLN6-212ENST00000636020 PTGS1P23219 599 aa21.86■■□□□ 1.09
CLN6-212ENST00000636020 UIMC1Q96RL1 719 aa21.86■■□□□ 1.09
CLN6-212ENST00000636020 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.86■■□□□ 1.09
CLN6-212ENST00000636020 AP5M1Q9H0R1 490 aa21.86■■□□□ 1.09
CLN6-212ENST00000636020 ARMT1Q9H993 441 aa21.86■■□□□ 1.09
CLN6-212ENST00000636020 RAVER2Q9HCJ3 691 aaKnown RBP21.86■■□□□ 1.09
CLN6-212ENST00000636020 ATP8A2Q9NTI2 1148 aa21.86■■□□□ 1.09
CLN6-212ENST00000636020 LMCD1Q9NZU5 365 aa21.86■■□□□ 1.09
CLN6-212ENST00000636020 KIF28PB7ZC32 967 aa21.85■■□□□ 1.09
CLN6-212ENST00000636020 CYP2C9P11712 490 aa21.85■■□□□ 1.09
CLN6-212ENST00000636020 CNTN2Q02246 1040 aa21.85■■□□□ 1.09
CLN6-212ENST00000636020 SPRED2Q7Z698 418 aa21.85■■□□□ 1.09
CLN6-212ENST00000636020 HERC6Q8IVU3 1022 aa21.85■■□□□ 1.09
CLN6-212ENST00000636020 CHST13Q8NET6 341 aa21.85■■□□□ 1.09
CLN6-212ENST00000636020 SCN5AQ14524 2016 aa21.84■■□□□ 1.09
CLN6-212ENST00000636020 USP17L12C9JPN9 530 aa21.84■■□□□ 1.09
CLN6-212ENST00000636020 USP17L21D6R901 530 aa21.84■■□□□ 1.09
CLN6-212ENST00000636020 IPO8O15397 1037 aaKnown RBP21.84■■□□□ 1.09
CLN6-212ENST00000636020 SUPT20HL2P0C7V6 817 aa21.84■■□□□ 1.09
CLN6-212ENST00000636020 SMPD1P17405 629 aa21.84■■□□□ 1.09
CLN6-212ENST00000636020 FAM133AQ8N9E0 248 aa21.84■■□□□ 1.09
CLN6-212ENST00000636020 FBXL18Q96ME1 805 aa21.84■■□□□ 1.09
CLN6-212ENST00000636020 KCNH6Q9H252 994 aa21.84■■□□□ 1.09
CLN6-212ENST00000636020 SLC38A10Q9HBR0 1119 aa21.84■■□□□ 1.09
CLN6-212ENST00000636020 TRMT13Q9NUP7 481 aaKnown RBP21.84■■□□□ 1.09
CLN6-212ENST00000636020 BAZ2AQ9UIF9 1905 aaKnown RBP21.84■■□□□ 1.09
CLN6-212ENST00000636020 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms