RNA–Protein interactions for RNA: ENST00000635739.1

SMARCA2-246, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 4,272 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-246ENST00000635739 ANKRD13CQ8N6S4 541 aa9.32□□□□□ -0.92
SMARCA2-246ENST00000635739 UBLCP1Q8WVY7 318 aaPredicted RBP9.32□□□□□ -0.92
SMARCA2-246ENST00000635739 DHTKD1Q96HY7 919 aaPredicted RBP9.32□□□□□ -0.92
SMARCA2-246ENST00000635739 RSRC1Q96IZ7 334 aaKnown RBP9.32□□□□□ -0.92
SMARCA2-246ENST00000635739 LRRC27Q9C0I9 530 aa9.32□□□□□ -0.92
SMARCA2-246ENST00000635739 VEZTQ9HBM0 779 aa9.32□□□□□ -0.92
SMARCA2-246ENST00000635739 SENP2Q9HC62 589 aa9.32□□□□□ -0.92
SMARCA2-246ENST00000635739 NR1D1P20393 614 aa9.31□□□□□ -0.92
SMARCA2-246ENST00000635739 HNRNPH1P31943 449 aaKnown RBP9.31□□□□□ -0.92
SMARCA2-246ENST00000635739 MAP2K1Q02750 393 aaPredicted RBP9.31□□□□□ -0.92
SMARCA2-246ENST00000635739 ARID5AQ03989 594 aa9.31□□□□□ -0.92
SMARCA2-246ENST00000635739 NAA25Q14CX7 972 aa9.31□□□□□ -0.92
SMARCA2-246ENST00000635739 ZBTB38Q8NAP3 1195 aaPredicted RBP9.31□□□□□ -0.92
SMARCA2-246ENST00000635739 CCDC113Q9H0I3 377 aa9.31□□□□□ -0.92
SMARCA2-246ENST00000635739 CXorf56Q9H5V9 222 aa9.31□□□□□ -0.92
SMARCA2-246ENST00000635739 MKNK2Q9HBH9 465 aa9.31□□□□□ -0.92
SMARCA2-246ENST00000635739 RNF14Q9UBS8 474 aa9.31□□□□□ -0.92
SMARCA2-246ENST00000635739 EXOC5O00471 708 aa9.31□□□□□ -0.92
SMARCA2-246ENST00000635739 HEXIM1O94992 359 aaKnown RBP9.31□□□□□ -0.92
SMARCA2-246ENST00000635739 CXCR5P32302 372 aa9.31□□□□□ -0.92
SMARCA2-246ENST00000635739 MDM2Q00987 491 aaPredicted RBP9.31□□□□□ -0.92
SMARCA2-246ENST00000635739 KLHL7Q8IXQ5 586 aa9.31□□□□□ -0.92
SMARCA2-246ENST00000635739 CNOT6LQ96LI5 555 aaKnown RBP9.31□□□□□ -0.92
SMARCA2-246ENST00000635739 SPAG5Q96R06 1193 aa9.31□□□□□ -0.92
SMARCA2-246ENST00000635739 EPB41L5Q9HCM4 733 aa9.31□□□□□ -0.92
SMARCA2-246ENST00000635739 CAPN11Q9UMQ6 739 aa9.31□□□□□ -0.92
SMARCA2-246ENST00000635739 XRN1Q8IZH2 1706 aaKnown RBP9.31□□□□□ -0.92
SMARCA2-246ENST00000635739 GOLGA6L10A0A0M3HER8 536 aa9.31□□□□□ -0.92
SMARCA2-246ENST00000635739 PPP1R3GB7ZBB8 358 aa9.31□□□□□ -0.92
SMARCA2-246ENST00000635739 PRPF3O43395 683 aaKnown RBP9.31□□□□□ -0.92
SMARCA2-246ENST00000635739 CD44P16070 742 aaKnown RBP9.31□□□□□ -0.92
SMARCA2-246ENST00000635739 PRCPP42785 496 aa9.31□□□□□ -0.92
SMARCA2-246ENST00000635739 TOB1P50616 345 aaPredicted RBP9.31□□□□□ -0.92
SMARCA2-246ENST00000635739 MRPS25P82663 173 aaKnown RBP9.31□□□□□ -0.92
SMARCA2-246ENST00000635739 HEATR3Q7Z4Q2 680 aa9.31□□□□□ -0.92
SMARCA2-246ENST00000635739 CACNA2D3Q8IZS8 1091 aa9.31□□□□□ -0.92
SMARCA2-246ENST00000635739 ZSCAN10Q96SZ4 725 aaPredicted RBP9.31□□□□□ -0.92
SMARCA2-246ENST00000635739 ODF2LQ9ULJ1 636 aa9.31□□□□□ -0.92
SMARCA2-246ENST00000635739 RIMS1Q86UR5 1692 aaKnown RBP9.31□□□□□ -0.92
SMARCA2-246ENST00000635739 MEFVO15553 781 aaPredicted RBP9.31□□□□□ -0.92
SMARCA2-246ENST00000635739 RCAN1P53805 252 aa9.31□□□□□ -0.92
SMARCA2-246ENST00000635739 SNCBQ16143 134 aa9.31□□□□□ -0.92
SMARCA2-246ENST00000635739 GIGYF2Q6Y7W6 1299 aaKnown RBP9.31□□□□□ -0.92
SMARCA2-246ENST00000635739 GPIHBP1Q8IV16 184 aa9.31□□□□□ -0.92
SMARCA2-246ENST00000635739 SPATA4Q8NEY3 305 aa9.31□□□□□ -0.92
SMARCA2-246ENST00000635739 RUBCNQ92622 972 aa9.31□□□□□ -0.92
SMARCA2-246ENST00000635739 MTA3Q9BTC8 594 aa9.31□□□□□ -0.92
SMARCA2-246ENST00000635739 SEC63Q9UGP8 760 aaKnown RBP9.31□□□□□ -0.92
SMARCA2-246ENST00000635739 SWAP70Q9UH65 585 aa9.31□□□□□ -0.92
SMARCA2-246ENST00000635739 OVOS2A0A0G2JMS6 1433 aa9.3□□□□□ -0.92
SMARCA2-246ENST00000635739 MOCS3O95396 460 aa9.3□□□□□ -0.92
SMARCA2-246ENST00000635739 NTRK3Q16288 839 aa9.3□□□□□ -0.92
SMARCA2-246ENST00000635739 GLE1Q53GS7 698 aaKnown RBP9.3□□□□□ -0.92
SMARCA2-246ENST00000635739 WDR17Q8IZU2 1322 aa9.3□□□□□ -0.92
SMARCA2-246ENST00000635739 A0A0U1RQJ8 604 aa9.3□□□□□ -0.92
SMARCA2-246ENST00000635739 TRIM49BA6NDI0 452 aa9.3□□□□□ -0.92
SMARCA2-246ENST00000635739 ZNF185O15231 689 aa9.3□□□□□ -0.92
SMARCA2-246ENST00000635739 BUB1O43683 1085 aa9.3□□□□□ -0.92
SMARCA2-246ENST00000635739 PDE8AO60658 829 aa9.3□□□□□ -0.92
SMARCA2-246ENST00000635739 MYL1P05976 194 aa9.3□□□□□ -0.92
SMARCA2-246ENST00000635739 SCG2P13521 617 aa9.3□□□□□ -0.92
SMARCA2-246ENST00000635739 PAPD7Q5XG87 772 aaKnown RBP9.3□□□□□ -0.92
SMARCA2-246ENST00000635739 P2RX5Q93086 422 aa9.3□□□□□ -0.92
SMARCA2-246ENST00000635739 LRRC1Q9BTT6 524 aa9.3□□□□□ -0.92
SMARCA2-246ENST00000635739 CRNKL1Q9BZJ0 848 aaKnown RBP9.3□□□□□ -0.92
SMARCA2-246ENST00000635739 ACTR5Q9H9F9 607 aaPredicted RBP9.3□□□□□ -0.92
SMARCA2-246ENST00000635739 DENND2AQ9ULE3 1009 aa9.3□□□□□ -0.92
SMARCA2-246ENST00000635739 SNX12Q9UMY4 172 aa9.3□□□□□ -0.92
SMARCA2-246ENST00000635739 PCDHA13Q9Y5I0 950 aa9.3□□□□□ -0.92
SMARCA2-246ENST00000635739 FAM208AQ9UK61 1670 aaKnown RBP9.3□□□□□ -0.92
SMARCA2-246ENST00000635739 SV2BQ7L1I2 683 aa9.3□□□□□ -0.92
SMARCA2-246ENST00000635739 NSRP1Q9H0G5 558 aaKnown RBP9.3□□□□□ -0.92
SMARCA2-246ENST00000635739 NUCKS1Q9H1E3 243 aaKnown RBP9.3□□□□□ -0.92
SMARCA2-246ENST00000635739 GREM2Q9H772 168 aa9.3□□□□□ -0.92
SMARCA2-246ENST00000635739 HMGB1P1B2RPK0 211 aaPredicted RBP9.29□□□□□ -0.92
SMARCA2-246ENST00000635739 PRKAB2O43741 272 aa9.29□□□□□ -0.92
SMARCA2-246ENST00000635739 CCNE1P24864 410 aa9.29□□□□□ -0.92
SMARCA2-246ENST00000635739 SLC8A1P32418 973 aa9.29□□□□□ -0.92
SMARCA2-246ENST00000635739 CTNNA1P35221 906 aaKnown RBP9.29□□□□□ -0.92
SMARCA2-246ENST00000635739 CTSWP56202 376 aa9.29□□□□□ -0.92
SMARCA2-246ENST00000635739 PPARDQ03181 441 aa9.29□□□□□ -0.92
SMARCA2-246ENST00000635739 PRPF4BQ13523 1007 aaKnown RBP9.29□□□□□ -0.92
SMARCA2-246ENST00000635739 MTMR3Q13615 1198 aa9.29□□□□□ -0.92
SMARCA2-246ENST00000635739 RPS6KA1Q15418 735 aa9.29□□□□□ -0.92
SMARCA2-246ENST00000635739 GKAP1Q5VSY0 366 aaPredicted RBP9.29□□□□□ -0.92
SMARCA2-246ENST00000635739 CABP7Q86V35 215 aa9.29□□□□□ -0.92
SMARCA2-246ENST00000635739 BLIDQ8IZY5 108 aa9.29□□□□□ -0.92
SMARCA2-246ENST00000635739 ZNF444Q8N0Y2 327 aaPredicted RBP9.29□□□□□ -0.92
SMARCA2-246ENST00000635739 LMBR1Q8WVP7 490 aa9.29□□□□□ -0.92
SMARCA2-246ENST00000635739 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.29□□□□□ -0.92
SMARCA2-246ENST00000635739 MROH5Q6ZUA9 1318 aa9.29□□□□□ -0.92
SMARCA2-246ENST00000635739 UBE2Q2LH0YL09 131 aa9.29□□□□□ -0.92
SMARCA2-246ENST00000635739 FANCGO15287 622 aa9.29□□□□□ -0.92
SMARCA2-246ENST00000635739 KIF11P52732 1056 aa9.29□□□□□ -0.92
SMARCA2-246ENST00000635739 RAPGEF1Q13905 1077 aa9.29□□□□□ -0.92
SMARCA2-246ENST00000635739 ARL6IP4Q66PJ3 421 aaKnown RBP9.29□□□□□ -0.92
SMARCA2-246ENST00000635739 CCDC26Q8TAB7 109 aa9.29□□□□□ -0.92
SMARCA2-246ENST00000635739 WHAMMQ8TF30 809 aa9.29□□□□□ -0.92
SMARCA2-246ENST00000635739 STAG1Q8WVM7 1258 aa9.29□□□□□ -0.92
SMARCA2-246ENST00000635739 OSBPL9Q96SU4 736 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms