RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 CWC22Q9HCG8 908 aaKnown RBP11.36□□□□□ -0.59
LINC00339-210ENST00000635675 ZNFX1Q9P2E3 1918 aaKnown RBP11.35□□□□□ -0.59
LINC00339-210ENST00000635675 CCDC69A6NI79 296 aa11.35□□□□□ -0.59
LINC00339-210ENST00000635675 COBLO75128 1261 aa11.35□□□□□ -0.59
LINC00339-210ENST00000635675 DDAH1O94760 285 aa11.35□□□□□ -0.59
LINC00339-210ENST00000635675 ICAM1P05362 532 aa11.35□□□□□ -0.59
LINC00339-210ENST00000635675 FCER1AP12319 257 aa11.35□□□□□ -0.59
LINC00339-210ENST00000635675 CPA1P15085 419 aa11.35□□□□□ -0.59
LINC00339-210ENST00000635675 ELNP15502 786 aa11.35□□□□□ -0.59
LINC00339-210ENST00000635675 PSMA5P28066 241 aa11.35□□□□□ -0.59
LINC00339-210ENST00000635675 ADORA2AP29274 412 aa11.35□□□□□ -0.59
LINC00339-210ENST00000635675 RGS2P41220 211 aa11.35□□□□□ -0.59
LINC00339-210ENST00000635675 SLC4A3P48751 1232 aa11.35□□□□□ -0.59
LINC00339-210ENST00000635675 CCDC174Q6PII3 467 aa11.35□□□□□ -0.59
LINC00339-210ENST00000635675 BLOC1S2Q6QNY1 142 aa11.35□□□□□ -0.59
LINC00339-210ENST00000635675 NFXL1Q6ZNB6 911 aa11.35□□□□□ -0.59
LINC00339-210ENST00000635675 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.35□□□□□ -0.59
LINC00339-210ENST00000635675 NBPF11Q86T75 865 aa11.35□□□□□ -0.59
LINC00339-210ENST00000635675 ADGRF4Q8IZF3 695 aa11.35□□□□□ -0.59
LINC00339-210ENST00000635675 FBXL16Q8N461 479 aa11.35□□□□□ -0.59
LINC00339-210ENST00000635675 SH3TC2Q8TF17 1288 aa11.35□□□□□ -0.59
LINC00339-210ENST00000635675 ZNF333Q96JL9 665 aa11.35□□□□□ -0.59
LINC00339-210ENST00000635675 SMCHD1A6NHR9 2005 aa11.35□□□□□ -0.59
LINC00339-210ENST00000635675 ZNF236Q9UL36 1845 aa11.35□□□□□ -0.59
LINC00339-210ENST00000635675 IGHA2P01877 340 aa11.35□□□□□ -0.59
LINC00339-210ENST00000635675 RPS6KB1P23443 525 aa11.35□□□□□ -0.59
LINC00339-210ENST00000635675 KCTD2Q14681 263 aa11.35□□□□□ -0.59
LINC00339-210ENST00000635675 SLC35G1Q2M3R5 365 aa11.35□□□□□ -0.59
LINC00339-210ENST00000635675 TKFCQ3LXA3 575 aa11.35□□□□□ -0.59
LINC00339-210ENST00000635675 CHST13Q8NET6 341 aa11.35□□□□□ -0.59
LINC00339-210ENST00000635675 NUP133Q8WUM0 1156 aa11.35□□□□□ -0.59
LINC00339-210ENST00000635675 MMP19Q99542 508 aa11.35□□□□□ -0.59
LINC00339-210ENST00000635675 APBA2Q99767 749 aa11.35□□□□□ -0.59
LINC00339-210ENST00000635675 MYL10Q9BUA6 226 aa11.35□□□□□ -0.59
LINC00339-210ENST00000635675 TM6SF1Q9BZW5 370 aa11.35□□□□□ -0.59
LINC00339-210ENST00000635675 JMJD4Q9H9V9 463 aa11.35□□□□□ -0.59
LINC00339-210ENST00000635675 ZSWIM6Q9HCJ5 1215 aa11.35□□□□□ -0.59
LINC00339-210ENST00000635675 FBXO40Q9UH90 709 aa11.35□□□□□ -0.59
LINC00339-210ENST00000635675 PNMA2Q9UL42 364 aa11.35□□□□□ -0.59
LINC00339-210ENST00000635675 BRPF3Q9ULD4 1205 aa11.35□□□□□ -0.59
LINC00339-210ENST00000635675 SLC12A7Q9Y666 1083 aa11.35□□□□□ -0.59
LINC00339-210ENST00000635675 CCDC85CA6NKD9 419 aa11.34□□□□□ -0.59
LINC00339-210ENST00000635675 CALM1P0DP23 149 aa11.34□□□□□ -0.59
LINC00339-210ENST00000635675 CALM2P0DP24 149 aa11.34□□□□□ -0.59
LINC00339-210ENST00000635675 CALM3P0DP25 149 aa11.34□□□□□ -0.59
LINC00339-210ENST00000635675 CASTP20810 708 aaKnown RBP11.34□□□□□ -0.59
LINC00339-210ENST00000635675 ANAPC15P60006 121 aa11.34□□□□□ -0.59
LINC00339-210ENST00000635675 CCL14Q16627 93 aa11.34□□□□□ -0.59
LINC00339-210ENST00000635675 RUFY3Q7L099 469 aa11.34□□□□□ -0.59
LINC00339-210ENST00000635675 DPP9Q86TI2 863 aa11.34□□□□□ -0.59
LINC00339-210ENST00000635675 TRMT44Q8IYL2 757 aaKnown RBP11.34□□□□□ -0.59
LINC00339-210ENST00000635675 NPLOC4Q8TAT6 608 aa11.34□□□□□ -0.59
LINC00339-210ENST00000635675 TRIB2Q92519 343 aa11.34□□□□□ -0.59
LINC00339-210ENST00000635675 MTMR8Q96EF0 704 aa11.34□□□□□ -0.59
LINC00339-210ENST00000635675 IL17RAQ96F46 866 aa11.34□□□□□ -0.59
LINC00339-210ENST00000635675 TRERF1Q96PN7 1200 aa11.34□□□□□ -0.59
LINC00339-210ENST00000635675 AGXT2Q9BYV1 514 aa11.34□□□□□ -0.59
LINC00339-210ENST00000635675 RIOX1Q9H6W3 641 aa11.34□□□□□ -0.59
LINC00339-210ENST00000635675 VAT1LQ9HCJ6 419 aa11.34□□□□□ -0.59
LINC00339-210ENST00000635675 CCPG1Q9ULG6 757 aa11.34□□□□□ -0.59
LINC00339-210ENST00000635675 DNAJC25-GNG10A0A024R161 153 aa11.33□□□□□ -0.6
LINC00339-210ENST00000635675 CYTH3O43739 400 aa11.33□□□□□ -0.6
LINC00339-210ENST00000635675 INHAP05111 366 aa11.33□□□□□ -0.6
LINC00339-210ENST00000635675 PGK2P07205 417 aa11.33□□□□□ -0.6
LINC00339-210ENST00000635675 ALAS1P13196 640 aa11.33□□□□□ -0.6
LINC00339-210ENST00000635675 TAL1P17542 331 aaPredicted RBP11.33□□□□□ -0.6
LINC00339-210ENST00000635675 SMARCA1P28370 1054 aa11.33□□□□□ -0.6
LINC00339-210ENST00000635675 KIF5BP33176 963 aa11.33□□□□□ -0.6
LINC00339-210ENST00000635675 CDC37Q16543 378 aaPredicted RBP11.33□□□□□ -0.6
LINC00339-210ENST00000635675 ZNF792Q3KQV3 632 aa11.33□□□□□ -0.6
LINC00339-210ENST00000635675 MUM1L1Q5H9M0 696 aa11.33□□□□□ -0.6
LINC00339-210ENST00000635675 APOA5Q6Q788 366 aa11.33□□□□□ -0.6
LINC00339-210ENST00000635675 Q6ZUG5 572 aa11.33□□□□□ -0.6
LINC00339-210ENST00000635675 FANCBQ8NB91 859 aa11.33□□□□□ -0.6
LINC00339-210ENST00000635675 CTCFLQ8NI51 663 aaPredicted RBP11.33□□□□□ -0.6
LINC00339-210ENST00000635675 ACAD9Q9H845 621 aa11.33□□□□□ -0.6
LINC00339-210ENST00000635675 HOMER2Q9NSB8 354 aa11.33□□□□□ -0.6
LINC00339-210ENST00000635675 RNF146Q9NTX7 359 aa11.33□□□□□ -0.6
LINC00339-210ENST00000635675 SLC5A4Q9NY91 659 aa11.33□□□□□ -0.6
LINC00339-210ENST00000635675 FLRT1Q9NZU1 646 aa11.33□□□□□ -0.6
LINC00339-210ENST00000635675 BIN2Q9UBW5 565 aaPredicted RBP11.33□□□□□ -0.6
LINC00339-210ENST00000635675 CYP46A1Q9Y6A2 500 aa11.33□□□□□ -0.6
LINC00339-210ENST00000635675 BAZ2BQ9UIF8 2168 aaKnown RBP11.32□□□□□ -0.6
LINC00339-210ENST00000635675 DHX16O60231 1041 aaKnown RBP11.32□□□□□ -0.6
LINC00339-210ENST00000635675 HMGCRP04035 888 aa11.32□□□□□ -0.6
LINC00339-210ENST00000635675 RXRAP19793 462 aa11.32□□□□□ -0.6
LINC00339-210ENST00000635675 EVCP57679 992 aa11.32□□□□□ -0.6
LINC00339-210ENST00000635675 UBXN2AP68543 259 aa11.32□□□□□ -0.6
LINC00339-210ENST00000635675 TRIM32Q13049 653 aa11.32□□□□□ -0.6
LINC00339-210ENST00000635675 MTFR1Q15390 333 aa11.32□□□□□ -0.6
LINC00339-210ENST00000635675 QRICH1Q2TAL8 776 aa11.32□□□□□ -0.6
LINC00339-210ENST00000635675 MAP3K21Q5TCX8 1036 aa11.32□□□□□ -0.6
LINC00339-210ENST00000635675 OLFML2BQ68BL8 750 aa11.32□□□□□ -0.6
LINC00339-210ENST00000635675 SYNE3Q6ZMZ3 975 aa11.32□□□□□ -0.6
LINC00339-210ENST00000635675 RAB11FIP4Q86YS3 637 aa11.32□□□□□ -0.6
LINC00339-210ENST00000635675 ANKRD35Q8N283 1001 aa11.32□□□□□ -0.6
LINC00339-210ENST00000635675 CLEC4DQ8WXI8 215 aa11.32□□□□□ -0.6
LINC00339-210ENST00000635675 BRF1Q92994 677 aa11.32□□□□□ -0.6
LINC00339-210ENST00000635675 DDX11Q96FC9 970 aa11.32□□□□□ -0.6
LINC00339-210ENST00000635675 LZTS2Q9BRK4 669 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms