RNA–Protein interactions for RNA: ENST00000635450.2

LINC00339-209, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-209ENST00000635450 COPB2P35606 906 aa18.34■□□□□ 0.53
LINC00339-209ENST00000635450 RTP1P59025 263 aa18.34■□□□□ 0.53
LINC00339-209ENST00000635450 LRRC41Q15345 812 aa18.34■□□□□ 0.53
LINC00339-209ENST00000635450 BMP2KLQ5H9B9 411 aa18.34■□□□□ 0.53
LINC00339-209ENST00000635450 SKAP1Q86WV1 359 aa18.34■□□□□ 0.53
LINC00339-209ENST00000635450 STAG1Q8WVM7 1258 aa18.34■□□□□ 0.53
LINC00339-209ENST00000635450 GMCL1Q96IK5 515 aa18.34■□□□□ 0.53
LINC00339-209ENST00000635450 IL25Q9H293 177 aa18.34■□□□□ 0.53
LINC00339-209ENST00000635450 DIS3Q9Y2L1 958 aaKnown RBP18.34■□□□□ 0.53
LINC00339-209ENST00000635450 DDX49Q9Y6V7 483 aaKnown RBP18.34■□□□□ 0.53
LINC00339-209ENST00000635450 LAMA2P24043 3122 aaKnown RBP18.34■□□□□ 0.53
LINC00339-209ENST00000635450 NEDD4P46934 1319 aa18.33■□□□□ 0.53
LINC00339-209ENST00000635450 SGSM2O43147 1006 aa18.33■□□□□ 0.52
LINC00339-209ENST00000635450 SNAI1O95863 264 aaPredicted RBP18.33■□□□□ 0.52
LINC00339-209ENST00000635450 PGK1P00558 417 aa18.33■□□□□ 0.52
LINC00339-209ENST00000635450 SLC1A4P43007 532 aa18.33■□□□□ 0.52
LINC00339-209ENST00000635450 NOVP48745 357 aa18.33■□□□□ 0.52
LINC00339-209ENST00000635450 STAT2P52630 851 aa18.33■□□□□ 0.52
LINC00339-209ENST00000635450 IRX5P78411 483 aaPredicted RBP18.33■□□□□ 0.52
LINC00339-209ENST00000635450 MDM2Q00987 491 aaPredicted RBP18.33■□□□□ 0.52
LINC00339-209ENST00000635450 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.33■□□□□ 0.52
LINC00339-209ENST00000635450 FERMT2Q96AC1 680 aa18.33■□□□□ 0.52
LINC00339-209ENST00000635450 AGBL1Q96MI9 1066 aa18.33■□□□□ 0.52
LINC00339-209ENST00000635450 KBTBD13C9JR72 458 aa18.32■□□□□ 0.52
LINC00339-209ENST00000635450 ADCYAP1R1P41586 468 aa18.32■□□□□ 0.52
LINC00339-209ENST00000635450 NT5C2P49902 561 aa18.32■□□□□ 0.52
LINC00339-209ENST00000635450 KIAA1211Q6ZU35 1233 aa18.32■□□□□ 0.52
LINC00339-209ENST00000635450 ESR2Q92731 530 aa18.32■□□□□ 0.52
LINC00339-209ENST00000635450 XPNPEP3Q9NQH7 507 aa18.32■□□□□ 0.52
LINC00339-209ENST00000635450 ASTN1O14525 1302 aa18.31■□□□□ 0.52
LINC00339-209ENST00000635450 A0A1W2PPC1 479 aa18.31■□□□□ 0.52
LINC00339-209ENST00000635450 MYADML2A6NDP7 307 aa18.31■□□□□ 0.52
LINC00339-209ENST00000635450 BMP8BP34820 402 aa18.31■□□□□ 0.52
LINC00339-209ENST00000635450 CNTN2Q02246 1040 aa18.31■□□□□ 0.52
LINC00339-209ENST00000635450 IKQ13123 557 aaPredicted RBP18.31■□□□□ 0.52
LINC00339-209ENST00000635450 TRIM60Q495X7 471 aa18.31■□□□□ 0.52
LINC00339-209ENST00000635450 TTBK2Q6IQ55 1244 aa18.31■□□□□ 0.52
LINC00339-209ENST00000635450 CCDC174Q6PII3 467 aa18.31■□□□□ 0.52
LINC00339-209ENST00000635450 CASC1Q6TDU7 716 aa18.31■□□□□ 0.52
LINC00339-209ENST00000635450 ARRDC4Q8NCT1 418 aa18.31■□□□□ 0.52
LINC00339-209ENST00000635450 DDX11Q96FC9 970 aa18.31■□□□□ 0.52
LINC00339-209ENST00000635450 PRR12Q9ULL5 1215 aa18.31■□□□□ 0.52
LINC00339-209ENST00000635450 ATP11BQ9Y2G3 1177 aa18.31■□□□□ 0.52
LINC00339-209ENST00000635450 CTDP1Q9Y5B0 961 aaPredicted RBP18.31■□□□□ 0.52
LINC00339-209ENST00000635450 FRMPD2Q68DX3 1309 aaPredicted RBP18.3■□□□□ 0.52
LINC00339-209ENST00000635450 SYNGAP1Q96PV0 1343 aa18.3■□□□□ 0.52
LINC00339-209ENST00000635450 SYNRGQ9UMZ2 1314 aa18.3■□□□□ 0.52
LINC00339-209ENST00000635450 ADAMTS4O75173 837 aa18.3■□□□□ 0.52
LINC00339-209ENST00000635450 RARBP10826 455 aa18.3■□□□□ 0.52
LINC00339-209ENST00000635450 OAZ1P54368 228 aa18.3■□□□□ 0.52
LINC00339-209ENST00000635450 SNX17Q15036 470 aa18.3■□□□□ 0.52
LINC00339-209ENST00000635450 CCDC96Q2M329 555 aa18.3■□□□□ 0.52
LINC00339-209ENST00000635450 MUM1L1Q5H9M0 696 aa18.3■□□□□ 0.52
LINC00339-209ENST00000635450 RCSD1Q6JBY9 416 aa18.3■□□□□ 0.52
LINC00339-209ENST00000635450 MAMDC4Q6UXC1 1216 aa18.3■□□□□ 0.52
LINC00339-209ENST00000635450 SLC39A5Q6ZMH5 540 aa18.3■□□□□ 0.52
LINC00339-209ENST00000635450 ANKRD35Q8N283 1001 aa18.3■□□□□ 0.52
LINC00339-209ENST00000635450 TMEM47Q9BQJ4 181 aa18.3■□□□□ 0.52
LINC00339-209ENST00000635450 KRT23Q9C075 422 aa18.3■□□□□ 0.52
LINC00339-209ENST00000635450 CNNM2Q9H8M5 875 aa18.3■□□□□ 0.52
LINC00339-209ENST00000635450 A1CFQ9NQ94 594 aaKnown RBP18.3■□□□□ 0.52
LINC00339-209ENST00000635450 RNF146Q9NTX7 359 aa18.3■□□□□ 0.52
LINC00339-209ENST00000635450 TCP11L1Q9NUJ3 509 aa18.3■□□□□ 0.52
LINC00339-209ENST00000635450 NRBP1Q9UHY1 535 aa18.3■□□□□ 0.52
LINC00339-209ENST00000635450 ZHX1Q9UKY1 873 aaPredicted RBP18.3■□□□□ 0.52
LINC00339-209ENST00000635450 U3KPZ7 1027 aaPredicted RBP18.3■□□□□ 0.52
LINC00339-209ENST00000635450 MYH6P13533 1939 aa18.29■□□□□ 0.52
LINC00339-209ENST00000635450 AKR1A1P14550 325 aa18.29■□□□□ 0.52
LINC00339-209ENST00000635450 PTGS1P23219 599 aa18.29■□□□□ 0.52
LINC00339-209ENST00000635450 SLC16A2P36021 539 aa18.29■□□□□ 0.52
LINC00339-209ENST00000635450 PTH1RQ03431 593 aa18.29■□□□□ 0.52
LINC00339-209ENST00000635450 FAM160B2Q86V87 743 aa18.29■□□□□ 0.52
LINC00339-209ENST00000635450 IQCA1Q86XH1 822 aa18.29■□□□□ 0.52
LINC00339-209ENST00000635450 CHST13Q8NET6 341 aa18.29■□□□□ 0.52
LINC00339-209ENST00000635450 UBE2OQ9C0C9 1292 aaKnown RBP18.29■□□□□ 0.52
LINC00339-209ENST00000635450 KATNBL1Q9H079 304 aa18.29■□□□□ 0.52
LINC00339-209ENST00000635450 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.29■□□□□ 0.52
LINC00339-209ENST00000635450 PHF24Q9UPV7 400 aa18.29■□□□□ 0.52
LINC00339-209ENST00000635450 CNPY2Q9Y2B0 182 aa18.29■□□□□ 0.52
LINC00339-209ENST00000635450 COL6A3P12111 3177 aa18.29■□□□□ 0.52
LINC00339-209ENST00000635450 ALAS1P13196 640 aa18.28■□□□□ 0.52
LINC00339-209ENST00000635450 TRDNQ13061 729 aa18.28■□□□□ 0.52
LINC00339-209ENST00000635450 CCDC178Q5BJE1 867 aa18.28■□□□□ 0.52
LINC00339-209ENST00000635450 ARMCX2Q7L311 632 aa18.28■□□□□ 0.52
LINC00339-209ENST00000635450 SH3RF1Q7Z6J0 888 aa18.28■□□□□ 0.52
LINC00339-209ENST00000635450 TDHQ8IZJ6 230 aa18.28■□□□□ 0.52
LINC00339-209ENST00000635450 FAM133AQ8N9E0 248 aa18.28■□□□□ 0.52
LINC00339-209ENST00000635450 CHURC1Q8WUH1 139 aa18.28■□□□□ 0.52
LINC00339-209ENST00000635450 TTC14Q96N46 770 aa18.28■□□□□ 0.52
LINC00339-209ENST00000635450 PURBQ96QR8 312 aaKnown RBP18.28■□□□□ 0.52
LINC00339-209ENST00000635450 ZKSCAN3Q9BRR0 538 aa18.28■□□□□ 0.52
LINC00339-209ENST00000635450 ESYT1Q9BSJ8 1104 aa18.28■□□□□ 0.52
LINC00339-209ENST00000635450 ACAD9Q9H845 621 aa18.28■□□□□ 0.52
LINC00339-209ENST00000635450 A0A1W2PQ45 241 aaPredicted RBP18.27■□□□□ 0.52
LINC00339-209ENST00000635450 A0A1W2PQY0 241 aa18.27■□□□□ 0.52
LINC00339-209ENST00000635450 SOWAHBA6NEL2 793 aa18.27■□□□□ 0.52
LINC00339-209ENST00000635450 B4E1Z4 1266 aa18.27■□□□□ 0.52
LINC00339-209ENST00000635450 PLA2G6O60733 806 aa18.27■□□□□ 0.52
LINC00339-209ENST00000635450 KDM4AO75164 1064 aa18.27■□□□□ 0.52
LINC00339-209ENST00000635450 CDC45O75419 566 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms