RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 CPZQ66K79 652 aa4.18□□□□□ -1.74
SMARCB1-208ENST00000634926 SPRED1Q7Z699 444 aa4.18□□□□□ -1.74
SMARCB1-208ENST00000634926 SLCO6A1Q86UG4 719 aa4.18□□□□□ -1.74
SMARCB1-208ENST00000634926 SLFN12Q8IYM2 578 aa4.18□□□□□ -1.74
SMARCB1-208ENST00000634926 LINC00116Q8NCU8 138 aa4.18□□□□□ -1.74
SMARCB1-208ENST00000634926 TMEM52Q8NDY8 209 aa4.18□□□□□ -1.74
SMARCB1-208ENST00000634926 C1QTNF3Q9BXJ4 246 aa4.18□□□□□ -1.74
SMARCB1-208ENST00000634926 ASPNQ9BXN1 380 aa4.18□□□□□ -1.74
SMARCB1-208ENST00000634926 RNF19AQ9NV58 838 aa4.18□□□□□ -1.74
SMARCB1-208ENST00000634926 USP40Q9NVE5 1235 aa4.18□□□□□ -1.74
SMARCB1-208ENST00000634926 GIPC1O14908 333 aa4.17□□□□□ -1.74
SMARCB1-208ENST00000634926 ACVRL1P37023 503 aa4.17□□□□□ -1.74
SMARCB1-208ENST00000634926 TNNI2P48788 182 aa4.17□□□□□ -1.74
SMARCB1-208ENST00000634926 TSNAXIP1Q2TAA8 658 aa4.17□□□□□ -1.74
SMARCB1-208ENST00000634926 CRB2Q5IJ48 1285 aa4.17□□□□□ -1.74
SMARCB1-208ENST00000634926 SAPCD2Q86UD0 394 aa4.17□□□□□ -1.74
SMARCB1-208ENST00000634926 DAGLBQ8NCG7 672 aa4.17□□□□□ -1.74
SMARCB1-208ENST00000634926 KIF2CQ99661 725 aa4.17□□□□□ -1.74
SMARCB1-208ENST00000634926 LNPKQ9C0E8 428 aa4.17□□□□□ -1.74
SMARCB1-208ENST00000634926 MIR1-1HGQ9H1L0 117 aa4.17□□□□□ -1.74
SMARCB1-208ENST00000634926 GNEQ9Y223 722 aaKnown RBP4.17□□□□□ -1.74
SMARCB1-208ENST00000634926 POLA1P09884 1462 aaPredicted RBP4.17□□□□□ -1.74
SMARCB1-208ENST00000634926 ARAP1Q96P48 1450 aa4.17□□□□□ -1.74
SMARCB1-208ENST00000634926 ABCC8Q09428 1581 aa4.16□□□□□ -1.74
SMARCB1-208ENST00000634926 MC3RP41968 323 aa4.16□□□□□ -1.74
SMARCB1-208ENST00000634926 YARSP54577 528 aaKnown RBP4.16□□□□□ -1.74
SMARCB1-208ENST00000634926 FOXO4P98177 505 aa4.16□□□□□ -1.74
SMARCB1-208ENST00000634926 CYP4F8P98187 520 aa4.16□□□□□ -1.74
SMARCB1-208ENST00000634926 CDSNQ15517 529 aa4.16□□□□□ -1.74
SMARCB1-208ENST00000634926 OLFML2BQ68BL8 750 aa4.16□□□□□ -1.74
SMARCB1-208ENST00000634926 GALNT18Q6P9A2 607 aa4.16□□□□□ -1.74
SMARCB1-208ENST00000634926 BNC2Q6ZN30 1099 aaPredicted RBP4.16□□□□□ -1.74
SMARCB1-208ENST00000634926 ENOX1Q8TC92 643 aaKnown RBP4.16□□□□□ -1.74
SMARCB1-208ENST00000634926 ERVK13-1Q9NX77 482 aa4.16□□□□□ -1.74
SMARCB1-208ENST00000634926 REV1Q9UBZ9 1251 aa4.16□□□□□ -1.74
SMARCB1-208ENST00000634926 ACSL6Q9UKU0 697 aa4.16□□□□□ -1.74
SMARCB1-208ENST00000634926 POLR3KQ9Y2Y1 108 aaPredicted RBP4.16□□□□□ -1.74
SMARCB1-208ENST00000634926 IVNS1ABPQ9Y6Y0 642 aa4.16□□□□□ -1.74
SMARCB1-208ENST00000634926 FAM221AA4D161 298 aa4.15□□□□□ -1.75
SMARCB1-208ENST00000634926 SH3D21A4FU49 640 aa4.15□□□□□ -1.75
SMARCB1-208ENST00000634926 UBOX5O94941 541 aa4.15□□□□□ -1.75
SMARCB1-208ENST00000634926 PRAMEF1O95521 474 aa4.15□□□□□ -1.75
SMARCB1-208ENST00000634926 TACR2P21452 398 aa4.15□□□□□ -1.75
SMARCB1-208ENST00000634926 MAPK1P28482 360 aa4.15□□□□□ -1.75
SMARCB1-208ENST00000634926 PCBP3P57721 371 aaKnown RBP4.15□□□□□ -1.75
SMARCB1-208ENST00000634926 MVKQ03426 396 aa4.15□□□□□ -1.75
SMARCB1-208ENST00000634926 SND1Q7KZF4 910 aaKnown RBP eCLIP4.15□□□□□ -1.75
SMARCB1-208ENST00000634926 ZNF655Q8N720 491 aaPredicted RBP4.15□□□□□ -1.75
SMARCB1-208ENST00000634926 NUP43Q8NFH3 380 aa4.15□□□□□ -1.75
SMARCB1-208ENST00000634926 JMJD8Q96S16 334 aa4.15□□□□□ -1.75
SMARCB1-208ENST00000634926 SSBP3Q9BWW4 388 aaPredicted RBP4.15□□□□□ -1.75
SMARCB1-208ENST00000634926 IMPACTQ9P2X3 320 aa4.15□□□□□ -1.75
SMARCB1-208ENST00000634926 TNFRSF10DQ9UBN6 386 aa4.15□□□□□ -1.75
SMARCB1-208ENST00000634926 KLHL3Q9UH77 587 aa4.15□□□□□ -1.75
SMARCB1-208ENST00000634926 TAF6LQ9Y6J9 622 aa4.15□□□□□ -1.75
SMARCB1-208ENST00000634926 ABCA5Q8WWZ7 1642 aa4.14□□□□□ -1.75
SMARCB1-208ENST00000634926 PBRM1Q86U86 1689 aa4.14□□□□□ -1.75
SMARCB1-208ENST00000634926 WTIPA6NIX2 430 aaPredicted RBP4.14□□□□□ -1.75
SMARCB1-208ENST00000634926 F6X3S4 739 aa4.14□□□□□ -1.75
SMARCB1-208ENST00000634926 MAPKAPK2P49137 400 aa4.14□□□□□ -1.75
SMARCB1-208ENST00000634926 LAPTM5Q13571 262 aa4.14□□□□□ -1.75
SMARCB1-208ENST00000634926 NBPF9Q3BBW0 867 aa4.14□□□□□ -1.75
SMARCB1-208ENST00000634926 ALG1LQ6GMV1 187 aa4.14□□□□□ -1.75
SMARCB1-208ENST00000634926 CRIP3Q6Q6R5 217 aa4.14□□□□□ -1.75
SMARCB1-208ENST00000634926 FCRL2Q96LA5 508 aaPredicted RBP4.14□□□□□ -1.75
SMARCB1-208ENST00000634926 CCDC74BQ96LY2 380 aa4.14□□□□□ -1.75
SMARCB1-208ENST00000634926 SPG7Q9UQ90 795 aa4.14□□□□□ -1.75
SMARCB1-208ENST00000634926 PMF1-BGLAPU3KQ54 211 aa4.14□□□□□ -1.75
SMARCB1-208ENST00000634926 CUX1P39880 1505 aa4.14□□□□□ -1.75
SMARCB1-208ENST00000634926 PRR36Q9H6K5 1346 aa4.14□□□□□ -1.75
SMARCB1-208ENST00000634926 LMNB1P20700 586 aa4.13□□□□□ -1.75
SMARCB1-208ENST00000634926 ARL4AP40617 200 aa4.13□□□□□ -1.75
SMARCB1-208ENST00000634926 CTSKP43235 329 aa4.13□□□□□ -1.75
SMARCB1-208ENST00000634926 CCDC27Q2M243 656 aa4.13□□□□□ -1.75
SMARCB1-208ENST00000634926 TBC1D10BQ4KMP7 808 aaPredicted RBP4.13□□□□□ -1.75
SMARCB1-208ENST00000634926 MEI1Q5TIA1 1274 aa4.13□□□□□ -1.75
SMARCB1-208ENST00000634926 ZC3H14Q6PJT7 736 aaKnown RBP4.13□□□□□ -1.75
SMARCB1-208ENST00000634926 CARFQ8N187 725 aa4.13□□□□□ -1.75
SMARCB1-208ENST00000634926 LOXL4Q96JB6 756 aa4.13□□□□□ -1.75
SMARCB1-208ENST00000634926 NOX5Q96PH1 765 aa4.13□□□□□ -1.75
SMARCB1-208ENST00000634926 SLITRK6Q9H5Y7 841 aa4.13□□□□□ -1.75
SMARCB1-208ENST00000634926 SPATA6Q9NWH7 488 aaPredicted RBP4.13□□□□□ -1.75
SMARCB1-208ENST00000634926 BIN2Q9UBW5 565 aaPredicted RBP4.13□□□□□ -1.75
SMARCB1-208ENST00000634926 ST6GALNAC2Q9UJ37 374 aa4.13□□□□□ -1.75
SMARCB1-208ENST00000634926 HTR3BO95264 441 aa4.12□□□□□ -1.75
SMARCB1-208ENST00000634926 PFKLP17858 780 aa4.12□□□□□ -1.75
SMARCB1-208ENST00000634926 NBPF12Q5TAG4 269 aaPredicted RBP4.12□□□□□ -1.75
SMARCB1-208ENST00000634926 NLGN1Q8N2Q7 840 aa4.12□□□□□ -1.75
SMARCB1-208ENST00000634926 PHC3Q8NDX5 983 aa4.12□□□□□ -1.75
SMARCB1-208ENST00000634926 SH3RF3Q8TEJ3 882 aaPredicted RBP4.12□□□□□ -1.75
SMARCB1-208ENST00000634926 SAMD11Q96NU1 681 aa4.12□□□□□ -1.75
SMARCB1-208ENST00000634926 BCAS3Q9H6U6 928 aa4.12□□□□□ -1.75
SMARCB1-208ENST00000634926 ING1Q9UK53 422 aaPredicted RBP4.12□□□□□ -1.75
SMARCB1-208ENST00000634926 AQRO60306 1485 aaKnown RBP eCLIP4.11□□□□□ -1.75
SMARCB1-208ENST00000634926 SNAPC4Q5SXM2 1469 aa4.11□□□□□ -1.75
SMARCB1-208ENST00000634926 FGD5Q6ZNL6 1462 aa4.11□□□□□ -1.75
SMARCB1-208ENST00000634926 MAGI1Q96QZ7 1491 aaPredicted RBP4.11□□□□□ -1.75
SMARCB1-208ENST00000634926 SHROOM2Q13796 1616 aa4.11□□□□□ -1.75
SMARCB1-208ENST00000634926 SSU72P8A0A1W2PR75 194 aa4.11□□□□□ -1.75
SMARCB1-208ENST00000634926 F13A1P00488 732 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 142.7 ms