RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 CLK2P49760 499 aaKnown RBP6.31□□□□□ -1.4
NEK3-211ENST00000629912 MRPL12P52815 198 aaKnown RBP6.31□□□□□ -1.4
NEK3-211ENST00000629912 GSDMDP57764 484 aa6.31□□□□□ -1.4
NEK3-211ENST00000629912 FANCCQ00597 558 aa6.31□□□□□ -1.4
NEK3-211ENST00000629912 MAP3K10Q02779 954 aa6.31□□□□□ -1.4
NEK3-211ENST00000629912 TCP10Q12799 353 aa6.31□□□□□ -1.4
NEK3-211ENST00000629912 PDIA5Q14554 519 aa6.31□□□□□ -1.4
NEK3-211ENST00000629912 INF2Q27J81 1249 aa6.31□□□□□ -1.4
NEK3-211ENST00000629912 ABCB5Q2M3G0 1257 aa6.31□□□□□ -1.4
NEK3-211ENST00000629912 MCTP2Q6DN12 878 aa6.31□□□□□ -1.4
NEK3-211ENST00000629912 ISM2Q6H9L7 571 aa6.31□□□□□ -1.4
NEK3-211ENST00000629912 BTNL9Q6UXG8 535 aa6.31□□□□□ -1.4
NEK3-211ENST00000629912 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.31□□□□□ -1.4
NEK3-211ENST00000629912 DEFB132Q7Z7B7 95 aa6.31□□□□□ -1.4
NEK3-211ENST00000629912 NEK8Q86SG6 692 aa6.31□□□□□ -1.4
NEK3-211ENST00000629912 ADGRF4Q8IZF3 695 aa6.31□□□□□ -1.4
NEK3-211ENST00000629912 REXO1Q8N1G1 1221 aaKnown RBP6.31□□□□□ -1.4
NEK3-211ENST00000629912 LRRC47Q8N1G4 583 aaKnown RBP6.31□□□□□ -1.4
NEK3-211ENST00000629912 PDILTQ8N807 584 aa6.31□□□□□ -1.4
NEK3-211ENST00000629912 SPC24Q8NBT2 197 aa6.31□□□□□ -1.4
NEK3-211ENST00000629912 GMCL1P1Q8NEA9 526 aa6.31□□□□□ -1.4
NEK3-211ENST00000629912 RASGRP4Q8TDF6 673 aa6.31□□□□□ -1.4
NEK3-211ENST00000629912 FAM151AQ8WW52 585 aa6.31□□□□□ -1.4
NEK3-211ENST00000629912 DHX58Q96C10 678 aa6.31□□□□□ -1.4
NEK3-211ENST00000629912 MTMR9Q96QG7 549 aa6.31□□□□□ -1.4
NEK3-211ENST00000629912 NAP1L4Q99733 375 aaKnown RBP6.31□□□□□ -1.4
NEK3-211ENST00000629912 TRIM34Q9BYJ4 488 aa6.31□□□□□ -1.4
NEK3-211ENST00000629912 PDGFDQ9GZP0 370 aaPredicted RBP6.31□□□□□ -1.4
NEK3-211ENST00000629912 TMEM60Q9H2L4 133 aa6.31□□□□□ -1.4
NEK3-211ENST00000629912 CPVLQ9H3G5 476 aa6.31□□□□□ -1.4
NEK3-211ENST00000629912 KCNF1Q9H3M0 494 aa6.31□□□□□ -1.4
NEK3-211ENST00000629912 CUEDC2Q9H467 287 aa6.31□□□□□ -1.4
NEK3-211ENST00000629912 GPCPD1Q9NPB8 672 aa6.31□□□□□ -1.4
NEK3-211ENST00000629912 PIM2Q9P1W9 311 aa6.31□□□□□ -1.4
NEK3-211ENST00000629912 NRBP1Q9UHY1 535 aa6.31□□□□□ -1.4
NEK3-211ENST00000629912 HERC5Q9UII4 1024 aaKnown RBP6.31□□□□□ -1.4
NEK3-211ENST00000629912 ZNRF3Q9ULT6 936 aa6.31□□□□□ -1.4
NEK3-211ENST00000629912 MTMR7Q9Y216 660 aa6.31□□□□□ -1.4
NEK3-211ENST00000629912 PCDHAC2Q9Y5I4 1007 aa6.31□□□□□ -1.4
NEK3-211ENST00000629912 FRMPD2Q68DX3 1309 aaPredicted RBP6.3□□□□□ -1.4
NEK3-211ENST00000629912 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.3□□□□□ -1.4
NEK3-211ENST00000629912 PPP1R3GB7ZBB8 358 aa6.3□□□□□ -1.4
NEK3-211ENST00000629912 F5H6K3 240 aa6.3□□□□□ -1.4
NEK3-211ENST00000629912 PSMD14O00487 310 aa6.3□□□□□ -1.4
NEK3-211ENST00000629912 ZBTB5O15062 677 aa6.3□□□□□ -1.4
NEK3-211ENST00000629912 SLC26A4O43511 780 aa6.3□□□□□ -1.4
NEK3-211ENST00000629912 EDIL3O43854 480 aa6.3□□□□□ -1.4
NEK3-211ENST00000629912 HOXA7P31268 230 aaPredicted RBP6.3□□□□□ -1.4
NEK3-211ENST00000629912 UBA7P41226 1012 aa6.3□□□□□ -1.4
NEK3-211ENST00000629912 ADCY7P51828 1080 aa6.3□□□□□ -1.4
NEK3-211ENST00000629912 KLRC3Q07444 240 aa6.3□□□□□ -1.4
NEK3-211ENST00000629912 CUL4BQ13620 913 aa6.3□□□□□ -1.4
NEK3-211ENST00000629912 SEPT2Q15019 361 aa6.3□□□□□ -1.4
NEK3-211ENST00000629912 DLGAP5Q15398 846 aa6.3□□□□□ -1.4
NEK3-211ENST00000629912 SPDYE2Q495Y8 402 aa6.3□□□□□ -1.4
NEK3-211ENST00000629912 RBM26Q5T8P6 1007 aaKnown RBP6.3□□□□□ -1.4
NEK3-211ENST00000629912 SLFN13Q68D06 897 aa6.3□□□□□ -1.4
NEK3-211ENST00000629912 PPP4R3AQ6IN85 833 aa6.3□□□□□ -1.4
NEK3-211ENST00000629912 TTBK2Q6IQ55 1244 aa6.3□□□□□ -1.4
NEK3-211ENST00000629912 FAM83AQ86UY5 434 aa6.3□□□□□ -1.4
NEK3-211ENST00000629912 HOMER1Q86YM7 354 aa6.3□□□□□ -1.4
NEK3-211ENST00000629912 LRRC8AQ8IWT6 810 aa6.3□□□□□ -1.4
NEK3-211ENST00000629912 ZSCAN29Q8IWY8 852 aaPredicted RBP6.3□□□□□ -1.4
NEK3-211ENST00000629912 LARGE2Q8N3Y3 721 aa6.3□□□□□ -1.4
NEK3-211ENST00000629912 OGFOD1Q8N543 542 aa6.3□□□□□ -1.4
NEK3-211ENST00000629912 TBCKQ8TEA7 893 aa6.3□□□□□ -1.4
NEK3-211ENST00000629912 CACTINQ8WUQ7 758 aaKnown RBP6.3□□□□□ -1.4
NEK3-211ENST00000629912 COA7Q96BR5 231 aa6.3□□□□□ -1.4
NEK3-211ENST00000629912 GMCL1Q96IK5 515 aa6.3□□□□□ -1.4
NEK3-211ENST00000629912 ZBED3Q96IU2 234 aaPredicted RBP6.3□□□□□ -1.4
NEK3-211ENST00000629912 GTPBP4Q9BZE4 634 aaKnown RBP6.3□□□□□ -1.4
NEK3-211ENST00000629912 XPO4Q9C0E2 1151 aaKnown RBP6.3□□□□□ -1.4
NEK3-211ENST00000629912 MAGEF1Q9HAY2 307 aa6.3□□□□□ -1.4
NEK3-211ENST00000629912 KCND1Q9NSA2 647 aa6.3□□□□□ -1.4
NEK3-211ENST00000629912 FANCLQ9NW38 375 aa6.3□□□□□ -1.4
NEK3-211ENST00000629912 RMND1Q9NWS8 449 aa6.3□□□□□ -1.4
NEK3-211ENST00000629912 TMOD2Q9NZR1 351 aa6.3□□□□□ -1.4
NEK3-211ENST00000629912 IFNKQ9P0W0 207 aa6.3□□□□□ -1.4
NEK3-211ENST00000629912 BIN2Q9UBW5 565 aaPredicted RBP6.3□□□□□ -1.4
NEK3-211ENST00000629912 ZNF70Q9UC06 446 aaPredicted RBP6.3□□□□□ -1.4
NEK3-211ENST00000629912 ATF5Q9Y2D1 282 aaPredicted RBP6.3□□□□□ -1.4
NEK3-211ENST00000629912 CYP3A7-CYP3A51PA0A087WV96 503 aa6.29□□□□□ -1.4
NEK3-211ENST00000629912 LRRC10BA6NIK2 292 aa6.29□□□□□ -1.4
NEK3-211ENST00000629912 USP17L10C9JJH3 530 aa6.29□□□□□ -1.4
NEK3-211ENST00000629912 CCNT1O60563 726 aaKnown RBP6.29□□□□□ -1.4
NEK3-211ENST00000629912 PLA2G6O60733 806 aa6.29□□□□□ -1.4
NEK3-211ENST00000629912 PPP1R11O60927 126 aaPredicted RBP6.29□□□□□ -1.4
NEK3-211ENST00000629912 OR52Z1P0C646 297 aa6.29□□□□□ -1.4
NEK3-211ENST00000629912 ZNF18P17022 549 aa6.29□□□□□ -1.4
NEK3-211ENST00000629912 CYP3A7P24462 503 aa6.29□□□□□ -1.4
NEK3-211ENST00000629912 LMOD1P29536 600 aaPredicted RBP6.29□□□□□ -1.4
NEK3-211ENST00000629912 SLC1A4P43007 532 aa6.29□□□□□ -1.4
NEK3-211ENST00000629912 AFMP43652 599 aa6.29□□□□□ -1.4
NEK3-211ENST00000629912 FXR2P51116 673 aaKnown RBP eCLIP6.29□□□□□ -1.4
NEK3-211ENST00000629912 USP11P51784 963 aa6.29□□□□□ -1.4
NEK3-211ENST00000629912 CACNB3P54284 484 aa6.29□□□□□ -1.4
NEK3-211ENST00000629912 EIF6P56537 245 aaKnown RBP6.29□□□□□ -1.4
NEK3-211ENST00000629912 UBASH3AP57075 661 aa6.29□□□□□ -1.4
NEK3-211ENST00000629912 ATP2B2Q01814 1243 aa6.29□□□□□ -1.4
NEK3-211ENST00000629912 TRAF1Q13077 416 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms