RNA–Protein interactions for RNA: ENST00000626299.2

SOX2-OT-238, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 622 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-238ENST00000626299 CPA1P15085 419 aa15.86■□□□□ 0.13
SOX2-OT-238ENST00000626299 TRIM32Q13049 653 aa15.86■□□□□ 0.13
SOX2-OT-238ENST00000626299 GRM4Q14833 912 aa15.86■□□□□ 0.13
SOX2-OT-238ENST00000626299 MTFR1Q15390 333 aa15.86■□□□□ 0.13
SOX2-OT-238ENST00000626299 TCEANC2Q96MN5 208 aa15.86■□□□□ 0.13
SOX2-OT-238ENST00000626299 MMP19Q99542 508 aa15.86■□□□□ 0.13
SOX2-OT-238ENST00000626299 MYL10Q9BUA6 226 aa15.86■□□□□ 0.13
SOX2-OT-238ENST00000626299 FLRT1Q9NZU1 646 aa15.86■□□□□ 0.13
SOX2-OT-238ENST00000626299 BIN2Q9UBW5 565 aaPredicted RBP15.86■□□□□ 0.13
SOX2-OT-238ENST00000626299 COL11A1P12107 1806 aaPredicted RBP15.86■□□□□ 0.13
SOX2-OT-238ENST00000626299 ZNF236Q9UL36 1845 aa15.85■□□□□ 0.13
SOX2-OT-238ENST00000626299 PALM3A6NDB9 673 aaPredicted RBP15.85■□□□□ 0.13
SOX2-OT-238ENST00000626299 HMGCRP04035 888 aa15.85■□□□□ 0.13
SOX2-OT-238ENST00000626299 PGK2P07205 417 aa15.85■□□□□ 0.13
SOX2-OT-238ENST00000626299 LIFRP42702 1097 aa15.85■□□□□ 0.13
SOX2-OT-238ENST00000626299 SOX10P56693 466 aa15.85■□□□□ 0.13
SOX2-OT-238ENST00000626299 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.85■□□□□ 0.13
SOX2-OT-238ENST00000626299 DHX32Q7L7V1 743 aaKnown RBP15.85■□□□□ 0.13
SOX2-OT-238ENST00000626299 CATIPQ7Z7H3 387 aa15.85■□□□□ 0.13
SOX2-OT-238ENST00000626299 ADGRF4Q8IZF3 695 aa15.85■□□□□ 0.13
SOX2-OT-238ENST00000626299 ZNF654Q8IZM8 581 aa15.85■□□□□ 0.13
SOX2-OT-238ENST00000626299 CHST13Q8NET6 341 aa15.85■□□□□ 0.13
SOX2-OT-238ENST00000626299 JAKMIP1Q96N16 626 aaKnown RBP15.85■□□□□ 0.13
SOX2-OT-238ENST00000626299 HOMER2Q9NSB8 354 aa15.85■□□□□ 0.13
SOX2-OT-238ENST00000626299 CCPG1Q9ULG6 757 aa15.85■□□□□ 0.13
SOX2-OT-238ENST00000626299 WDR19Q8NEZ3 1342 aa15.85■□□□□ 0.13
SOX2-OT-238ENST00000626299 IGHA2P01877 340 aa15.84■□□□□ 0.13
SOX2-OT-238ENST00000626299 ALAS1P13196 640 aa15.84■□□□□ 0.13
SOX2-OT-238ENST00000626299 UBXN2AP68543 259 aa15.84■□□□□ 0.13
SOX2-OT-238ENST00000626299 KCTD2Q14681 263 aa15.84■□□□□ 0.13
SOX2-OT-238ENST00000626299 SLC35G1Q2M3R5 365 aa15.84■□□□□ 0.13
SOX2-OT-238ENST00000626299 NFXL1Q6ZNB6 911 aa15.84■□□□□ 0.13
SOX2-OT-238ENST00000626299 DPP9Q86TI2 863 aa15.84■□□□□ 0.13
SOX2-OT-238ENST00000626299 TRMT44Q8IYL2 757 aaKnown RBP15.84■□□□□ 0.13
SOX2-OT-238ENST00000626299 RNF146Q9NTX7 359 aa15.84■□□□□ 0.13
SOX2-OT-238ENST00000626299 POTEFA5A3E0 1075 aa15.83■□□□□ 0.12
SOX2-OT-238ENST00000626299 CCDC69A6NI79 296 aa15.83■□□□□ 0.12
SOX2-OT-238ENST00000626299 KLRF2D3W0D1 207 aa15.83■□□□□ 0.12
SOX2-OT-238ENST00000626299 DDAH1O94760 285 aa15.83■□□□□ 0.12
SOX2-OT-238ENST00000626299 HMGB1P09429 215 aaKnown RBP15.83■□□□□ 0.12
SOX2-OT-238ENST00000626299 CCL5P13501 91 aa15.83■□□□□ 0.12
SOX2-OT-238ENST00000626299 TKFCQ3LXA3 575 aa15.83■□□□□ 0.12
SOX2-OT-238ENST00000626299 MUM1L1Q5H9M0 696 aa15.83■□□□□ 0.12
SOX2-OT-238ENST00000626299 SGMS1Q86VZ5 419 aa15.83■□□□□ 0.12
SOX2-OT-238ENST00000626299 TMTC2Q8N394 836 aa15.83■□□□□ 0.12
SOX2-OT-238ENST00000626299 NUP133Q8WUM0 1156 aa15.83■□□□□ 0.12
SOX2-OT-238ENST00000626299 TRERF1Q96PN7 1200 aa15.83■□□□□ 0.12
SOX2-OT-238ENST00000626299 UNC93B1Q9H1C4 597 aa15.83■□□□□ 0.12
SOX2-OT-238ENST00000626299 ACAD9Q9H845 621 aa15.83■□□□□ 0.12
SOX2-OT-238ENST00000626299 JMJD4Q9H9V9 463 aa15.83■□□□□ 0.12
SOX2-OT-238ENST00000626299 FBXO40Q9UH90 709 aa15.83■□□□□ 0.12
SOX2-OT-238ENST00000626299 DNAJC25-GNG10A0A024R161 153 aa15.82■□□□□ 0.12
SOX2-OT-238ENST00000626299 SEC24BO95487 1268 aa15.82■□□□□ 0.12
SOX2-OT-238ENST00000626299 CDC37Q16543 378 aaPredicted RBP15.82■□□□□ 0.12
SOX2-OT-238ENST00000626299 ZNF792Q3KQV3 632 aa15.82■□□□□ 0.12
SOX2-OT-238ENST00000626299 MAP3K21Q5TCX8 1036 aa15.82■□□□□ 0.12
SOX2-OT-238ENST00000626299 RAB11FIP4Q86YS3 637 aa15.82■□□□□ 0.12
SOX2-OT-238ENST00000626299 MAML3Q96JK9 1138 aa15.82■□□□□ 0.12
SOX2-OT-238ENST00000626299 MAP3K14Q99558 947 aa15.82■□□□□ 0.12
SOX2-OT-238ENST00000626299 VAT1LQ9HCJ6 419 aa15.82■□□□□ 0.12
SOX2-OT-238ENST00000626299 CENPFP49454 3210 aa15.82■□□□□ 0.12
SOX2-OT-238ENST00000626299 CYTH3O43739 400 aa15.81■□□□□ 0.12
SOX2-OT-238ENST00000626299 DHX16O60231 1041 aaKnown RBP15.81■□□□□ 0.12
SOX2-OT-238ENST00000626299 PRKAR2AP13861 404 aaKnown RBP15.81■□□□□ 0.12
SOX2-OT-238ENST00000626299 RXRAP19793 462 aa15.81■□□□□ 0.12
SOX2-OT-238ENST00000626299 CASTP20810 708 aaKnown RBP15.81■□□□□ 0.12
SOX2-OT-238ENST00000626299 RPS6KB1P23443 525 aa15.81■□□□□ 0.12
SOX2-OT-238ENST00000626299 PSMA5P28066 241 aa15.81■□□□□ 0.12
SOX2-OT-238ENST00000626299 CACNB2Q08289 660 aaPredicted RBP15.81■□□□□ 0.12
SOX2-OT-238ENST00000626299 QRICH1Q2TAL8 776 aa15.81■□□□□ 0.12
SOX2-OT-238ENST00000626299 C8orf34Q49A92 452 aa15.81■□□□□ 0.12
SOX2-OT-238ENST00000626299 OLFML2BQ68BL8 750 aa15.81■□□□□ 0.12
SOX2-OT-238ENST00000626299 APOA5Q6Q788 366 aa15.81■□□□□ 0.12
SOX2-OT-238ENST00000626299 BLOC1S2Q6QNY1 142 aa15.81■□□□□ 0.12
SOX2-OT-238ENST00000626299 ANKRD35Q8N283 1001 aa15.81■□□□□ 0.12
SOX2-OT-238ENST00000626299 MTMR8Q96EF0 704 aa15.81■□□□□ 0.12
SOX2-OT-238ENST00000626299 RNF208Q9H0X6 261 aa15.81■□□□□ 0.12
SOX2-OT-238ENST00000626299 A1CFQ9NQ94 594 aaKnown RBP15.81■□□□□ 0.12
SOX2-OT-238ENST00000626299 SLC5A4Q9NY91 659 aa15.81■□□□□ 0.12
SOX2-OT-238ENST00000626299 BRPF3Q9ULD4 1205 aa15.81■□□□□ 0.12
SOX2-OT-238ENST00000626299 GTF3C3Q9Y5Q9 886 aa15.81■□□□□ 0.12
SOX2-OT-238ENST00000626299 SLC12A7Q9Y666 1083 aa15.81■□□□□ 0.12
SOX2-OT-238ENST00000626299 NFIBO00712 420 aa15.8■□□□□ 0.12
SOX2-OT-238ENST00000626299 CYP2C19P33261 490 aa15.8■□□□□ 0.12
SOX2-OT-238ENST00000626299 USH1GQ495M9 461 aa15.8■□□□□ 0.12
SOX2-OT-238ENST00000626299 CCDC144CPQ8IYA2 1237 aa15.8■□□□□ 0.12
SOX2-OT-238ENST00000626299 CTCFLQ8NI51 663 aaPredicted RBP15.8■□□□□ 0.12
SOX2-OT-238ENST00000626299 CLEC4DQ8WXI8 215 aa15.8■□□□□ 0.12
SOX2-OT-238ENST00000626299 DDX11Q96FC9 970 aa15.8■□□□□ 0.12
SOX2-OT-238ENST00000626299 FGD4Q96M96 766 aa15.8■□□□□ 0.12
SOX2-OT-238ENST00000626299 RIOX1Q9H6W3 641 aa15.8■□□□□ 0.12
SOX2-OT-238ENST00000626299 PAK6Q9NQU5 681 aaPredicted RBP15.8■□□□□ 0.12
SOX2-OT-238ENST00000626299 DIS3Q9Y2L1 958 aaKnown RBP15.8■□□□□ 0.12
SOX2-OT-238ENST00000626299 DOCK3Q8IZD9 2030 aa15.79■□□□□ 0.12
SOX2-OT-238ENST00000626299 RPTORQ8N122 1335 aa15.79■□□□□ 0.12
SOX2-OT-238ENST00000626299 PPP1R11O60927 126 aaPredicted RBP15.79■□□□□ 0.12
SOX2-OT-238ENST00000626299 PLEKHA8P1O95397 391 aa15.79■□□□□ 0.12
SOX2-OT-238ENST00000626299 CALM1P0DP23 149 aa15.79■□□□□ 0.12
SOX2-OT-238ENST00000626299 CALM2P0DP24 149 aa15.79■□□□□ 0.12
SOX2-OT-238ENST00000626299 CALM3P0DP25 149 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms