RNA–Protein interactions for RNA: ENST00000625617.2

TUBB3-215, Transcript of tubulin beta 3 class III, humanhuman

TSL 4 BASIC

Gene TUBB3, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-215ENST00000625617 SEC62Q99442 399 aaKnown RBP17.21■□□□□ 0.35
TUBB3-215ENST00000625617 ABHD16BQ9H3Z7 469 aa17.21■□□□□ 0.35
TUBB3-215ENST00000625617 MROH7Q68CQ1 1323 aa17.21■□□□□ 0.34
TUBB3-215ENST00000625617 FAAP100Q0VG06 881 aa17.2■□□□□ 0.34
TUBB3-215ENST00000625617 CCDC144BQ3MJ40 725 aa17.2■□□□□ 0.34
TUBB3-215ENST00000625617 CCSAPQ6IQ19 270 aaPredicted RBP17.2■□□□□ 0.34
TUBB3-215ENST00000625617 PCSK9Q8NBP7 692 aaKnown RBP17.2■□□□□ 0.34
TUBB3-215ENST00000625617 MAFAQ8NHW3 353 aaPredicted RBP17.2■□□□□ 0.34
TUBB3-215ENST00000625617 SEMA6BQ9H3T3 888 aa17.2■□□□□ 0.34
TUBB3-215ENST00000625617 ACAD9Q9H845 621 aa17.2■□□□□ 0.34
TUBB3-215ENST00000625617 PLXNA1Q9UIW2 1896 aa17.2■□□□□ 0.34
TUBB3-215ENST00000625617 CUL9Q8IWT3 2517 aa17.19■□□□□ 0.34
TUBB3-215ENST00000625617 TMEM265A0A087WTH1 108 aa17.19■□□□□ 0.34
TUBB3-215ENST00000625617 TMEM232C9JQI7 657 aa17.19■□□□□ 0.34
TUBB3-215ENST00000625617 ADCY6O43306 1168 aa17.19■□□□□ 0.34
TUBB3-215ENST00000625617 SLC1A4P43007 532 aa17.19■□□□□ 0.34
TUBB3-215ENST00000625617 TFAP4Q01664 338 aa17.19■□□□□ 0.34
TUBB3-215ENST00000625617 PPP4R3BQ5MIZ7 849 aa17.19■□□□□ 0.34
TUBB3-215ENST00000625617 ZMYM1Q5SVZ6 1142 aa17.19■□□□□ 0.34
TUBB3-215ENST00000625617 FAM160B2Q86V87 743 aa17.19■□□□□ 0.34
TUBB3-215ENST00000625617 OTUD7AQ8TE49 926 aaPredicted RBP17.19■□□□□ 0.34
TUBB3-215ENST00000625617 GMCL1Q96IK5 515 aa17.19■□□□□ 0.34
TUBB3-215ENST00000625617 UPF3AQ9H1J1 476 aaKnown RBP17.19■□□□□ 0.34
TUBB3-215ENST00000625617 TTYH1Q9H313 450 aaPredicted RBP17.19■□□□□ 0.34
TUBB3-215ENST00000625617 TBX21Q9UL17 535 aa17.19■□□□□ 0.34
TUBB3-215ENST00000625617 A0A0C4DFX4 3053 aa17.19■□□□□ 0.34
TUBB3-215ENST00000625617 ELP1O95163 1332 aa17.19■□□□□ 0.34
TUBB3-215ENST00000625617 ASGR1P07306 291 aa17.18■□□□□ 0.34
TUBB3-215ENST00000625617 GJA9P57773 515 aa17.18■□□□□ 0.34
TUBB3-215ENST00000625617 CCDC144CPQ8IYA2 1237 aa17.18■□□□□ 0.34
TUBB3-215ENST00000625617 CHURC1Q8WUH1 139 aa17.18■□□□□ 0.34
TUBB3-215ENST00000625617 MYLIPQ8WY64 445 aa17.18■□□□□ 0.34
TUBB3-215ENST00000625617 VTI1AQ96AJ9 217 aa17.18■□□□□ 0.34
TUBB3-215ENST00000625617 COL25A1Q9BXS0 654 aaPredicted RBP17.18■□□□□ 0.34
TUBB3-215ENST00000625617 RNF146Q9NTX7 359 aa17.18■□□□□ 0.34
TUBB3-215ENST00000625617 A0A0U1RQG5 324 aaPredicted RBP17.17■□□□□ 0.34
TUBB3-215ENST00000625617 TSPY2A6NKD2 308 aa17.17■□□□□ 0.34
TUBB3-215ENST00000625617 FOSL2P15408 326 aa17.17■□□□□ 0.34
TUBB3-215ENST00000625617 MX1P20591 662 aa17.17■□□□□ 0.34
TUBB3-215ENST00000625617 IRX5P78411 483 aaPredicted RBP17.17■□□□□ 0.34
TUBB3-215ENST00000625617 CNTN2Q02246 1040 aa17.17■□□□□ 0.34
TUBB3-215ENST00000625617 FAM133AQ8N9E0 248 aa17.17■□□□□ 0.34
TUBB3-215ENST00000625617 A1CFQ9NQ94 594 aaKnown RBP17.17■□□□□ 0.34
TUBB3-215ENST00000625617 STX8Q9UNK0 236 aa17.17■□□□□ 0.34
TUBB3-215ENST00000625617 ZNFX1Q9P2E3 1918 aaKnown RBP17.16■□□□□ 0.34
TUBB3-215ENST00000625617 LAMA2P24043 3122 aaKnown RBP17.16■□□□□ 0.34
TUBB3-215ENST00000625617 TIMP1P01033 207 aa17.16■□□□□ 0.34
TUBB3-215ENST00000625617 MCCP23508 829 aa17.16■□□□□ 0.34
TUBB3-215ENST00000625617 TKFCQ3LXA3 575 aa17.16■□□□□ 0.34
TUBB3-215ENST00000625617 GNASQ5JWF2 1037 aa17.16■□□□□ 0.34
TUBB3-215ENST00000625617 STAG1Q8WVM7 1258 aa17.16■□□□□ 0.34
TUBB3-215ENST00000625617 CHMP4CQ96CF2 233 aa17.16■□□□□ 0.34
TUBB3-215ENST00000625617 AGBL1Q96MI9 1066 aa17.16■□□□□ 0.34
TUBB3-215ENST00000625617 KATNBL1Q9H079 304 aa17.16■□□□□ 0.34
TUBB3-215ENST00000625617 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.16■□□□□ 0.34
TUBB3-215ENST00000625617 PCDHB15Q9Y5E8 787 aa17.16■□□□□ 0.34
TUBB3-215ENST00000625617 ZNF536O15090 1300 aa17.16■□□□□ 0.34
TUBB3-215ENST00000625617 SMCHD1A6NHR9 2005 aa17.15■□□□□ 0.34
TUBB3-215ENST00000625617 ASB14A6NK59 587 aa17.15■□□□□ 0.34
TUBB3-215ENST00000625617 ALAS1P13196 640 aa17.15■□□□□ 0.34
TUBB3-215ENST00000625617 DNAJB2P25686 324 aa17.15■□□□□ 0.34
TUBB3-215ENST00000625617 PPIGQ13427 754 aaKnown RBP eCLIP17.15■□□□□ 0.34
TUBB3-215ENST00000625617 MFSD5Q6N075 450 aa17.15■□□□□ 0.34
TUBB3-215ENST00000625617 CCDC174Q6PII3 467 aa17.15■□□□□ 0.34
TUBB3-215ENST00000625617 CCDC129Q6ZRS4 1044 aa17.15■□□□□ 0.34
TUBB3-215ENST00000625617 KCTD1Q719H9 257 aa17.15■□□□□ 0.34
TUBB3-215ENST00000625617 NOL8Q76FK4 1167 aaKnown RBP17.15■□□□□ 0.34
TUBB3-215ENST00000625617 MYH4Q9Y623 1939 aa17.14■□□□□ 0.33
TUBB3-215ENST00000625617 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.14■□□□□ 0.33
TUBB3-215ENST00000625617 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.14■□□□□ 0.33
TUBB3-215ENST00000625617 ARVCFO00192 962 aa17.14■□□□□ 0.33
TUBB3-215ENST00000625617 FOXP2O15409 715 aa17.14■□□□□ 0.33
TUBB3-215ENST00000625617 TLR3O15455 904 aaKnown RBP17.14■□□□□ 0.33
TUBB3-215ENST00000625617 PLA2G6O60733 806 aa17.14■□□□□ 0.33
TUBB3-215ENST00000625617 CDK7P50613 346 aa17.14■□□□□ 0.33
TUBB3-215ENST00000625617 TNFAIP2Q03169 654 aa17.14■□□□□ 0.33
TUBB3-215ENST00000625617 TLK2Q86UE8 772 aa17.14■□□□□ 0.33
TUBB3-215ENST00000625617 FAM126BQ8IXS8 530 aa17.14■□□□□ 0.33
TUBB3-215ENST00000625617 TRERF1Q96PN7 1200 aa17.14■□□□□ 0.33
TUBB3-215ENST00000625617 ZBTB47Q9UFB7 747 aaPredicted RBP17.14■□□□□ 0.33
TUBB3-215ENST00000625617 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.13■□□□□ 0.33
TUBB3-215ENST00000625617 SOWAHBA6NEL2 793 aa17.13■□□□□ 0.33
TUBB3-215ENST00000625617 CTAGE5O15320 804 aa17.13■□□□□ 0.33
TUBB3-215ENST00000625617 NMT2O60551 498 aa17.13■□□□□ 0.33
TUBB3-215ENST00000625617 NKX3-2P78367 333 aa17.13■□□□□ 0.33
TUBB3-215ENST00000625617 BEX3Q00994 111 aa17.13■□□□□ 0.33
TUBB3-215ENST00000625617 CTDSPL2Q05D32 466 aa17.13■□□□□ 0.33
TUBB3-215ENST00000625617 CCDC96Q2M329 555 aa17.13■□□□□ 0.33
TUBB3-215ENST00000625617 RASGRP2Q7LDG7 609 aa17.13■□□□□ 0.33
TUBB3-215ENST00000625617 TMEM199Q8N511 208 aa17.13■□□□□ 0.33
TUBB3-215ENST00000625617 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.13■□□□□ 0.33
TUBB3-215ENST00000625617 PPP1R12CQ9BZL4 782 aa17.13■□□□□ 0.33
TUBB3-215ENST00000625617 IL17RBQ9NRM6 502 aa17.13■□□□□ 0.33
TUBB3-215ENST00000625617 CCPG1Q9ULG6 757 aa17.13■□□□□ 0.33
TUBB3-215ENST00000625617 PRR12Q9ULL5 1215 aa17.13■□□□□ 0.33
TUBB3-215ENST00000625617 MTMR7Q9Y216 660 aa17.13■□□□□ 0.33
TUBB3-215ENST00000625617 UNC80Q8N2C7 3258 aa17.13■□□□□ 0.33
TUBB3-215ENST00000625617 RANBP6O60518 1105 aaKnown RBP17.12■□□□□ 0.33
TUBB3-215ENST00000625617 CSF2RAP15509 400 aa17.12■□□□□ 0.33
TUBB3-215ENST00000625617 SNAP25P60880 206 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms