RNA–Protein interactions for RNA: ENST00000624931.1

PCF11-207, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

Gene PCF11, Length 1,720 nt, Biotype TEC, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-207ENST00000624931 CCDC82Q8N4S0 544 aa19.98■□□□□ 0.79
PCF11-207ENST00000624931 TMEM47Q9BQJ4 181 aa19.98■□□□□ 0.79
PCF11-207ENST00000624931 STK36Q9NRP7 1315 aa19.98■□□□□ 0.79
PCF11-207ENST00000624931 GJB4Q9NTQ9 266 aa19.98■□□□□ 0.79
PCF11-207ENST00000624931 FHOD1Q9Y613 1164 aa19.98■□□□□ 0.79
PCF11-207ENST00000624931 SRCAPQ6ZRS2 3230 aa19.98■□□□□ 0.79
PCF11-207ENST00000624931 MPHOSPH10O00566 681 aaKnown RBP19.97■□□□□ 0.79
PCF11-207ENST00000624931 DDAH1O94760 285 aa19.97■□□□□ 0.79
PCF11-207ENST00000624931 ZRANB2O95218 330 aaKnown RBP eCLIP19.97■□□□□ 0.79
PCF11-207ENST00000624931 TUBB4BP68371 445 aa19.97■□□□□ 0.79
PCF11-207ENST00000624931 KIF4BQ2VIQ3 1234 aa19.97■□□□□ 0.79
PCF11-207ENST00000624931 C9orf131Q5VYM1 1079 aa19.97■□□□□ 0.79
PCF11-207ENST00000624931 PNMA1Q8ND90 353 aa19.97■□□□□ 0.79
PCF11-207ENST00000624931 TRPM4Q8TD43 1214 aa19.97■□□□□ 0.79
PCF11-207ENST00000624931 FAM151AQ8WW52 585 aa19.97■□□□□ 0.79
PCF11-207ENST00000624931 HSD3B7Q9H2F3 369 aa19.97■□□□□ 0.79
PCF11-207ENST00000624931 UTRNP46939 3433 aa19.97■□□□□ 0.79
PCF11-207ENST00000624931 IGKV6D-41A0A0C4DH26 115 aa19.96■□□□□ 0.79
PCF11-207ENST00000624931 STX10O60499 249 aa19.96■□□□□ 0.79
PCF11-207ENST00000624931 TADA3O75528 432 aa19.96■□□□□ 0.79
PCF11-207ENST00000624931 GDF11O95390 407 aa19.96■□□□□ 0.79
PCF11-207ENST00000624931 RRP1BQ14684 758 aaKnown RBP19.96■□□□□ 0.79
PCF11-207ENST00000624931 JAKMIP3Q5VZ66 844 aa19.96■□□□□ 0.79
PCF11-207ENST00000624931 REXO1L1PQ8IX06 675 aa19.96■□□□□ 0.79
PCF11-207ENST00000624931 TRIML1Q8N9V2 468 aa19.96■□□□□ 0.79
PCF11-207ENST00000624931 ANKS1AQ92625 1134 aa19.96■□□□□ 0.79
PCF11-207ENST00000624931 SLC26A6Q9BXS9 759 aa19.96■□□□□ 0.79
PCF11-207ENST00000624931 TRIM34Q9BYJ4 488 aa19.96■□□□□ 0.79
PCF11-207ENST00000624931 DDNO94850 711 aaPredicted RBP19.96■□□□□ 0.79
PCF11-207ENST00000624931 PNMA6AP0CW24 399 aaPredicted RBP19.96■□□□□ 0.79
PCF11-207ENST00000624931 NT5C2P49902 561 aa19.96■□□□□ 0.79
PCF11-207ENST00000624931 RCAN1P53805 252 aa19.96■□□□□ 0.79
PCF11-207ENST00000624931 KRT40Q6A162 431 aa19.96■□□□□ 0.79
PCF11-207ENST00000624931 KANK3Q6NY19 840 aa19.96■□□□□ 0.79
PCF11-207ENST00000624931 KRBA2Q6ZNG9 492 aa19.96■□□□□ 0.79
PCF11-207ENST00000624931 GPR161Q8N6U8 529 aaKnown RBP19.96■□□□□ 0.79
PCF11-207ENST00000624931 MLKLQ8NB16 471 aa19.96■□□□□ 0.79
PCF11-207ENST00000624931 GUCY1A2P33402 732 aa19.95■□□□□ 0.78
PCF11-207ENST00000624931 EPS15P42566 896 aa19.95■□□□□ 0.78
PCF11-207ENST00000624931 JAG1P78504 1218 aa19.95■□□□□ 0.78
PCF11-207ENST00000624931 SHC4Q6S5L8 630 aa19.95■□□□□ 0.78
PCF11-207ENST00000624931 GPC2Q8N158 579 aa19.95■□□□□ 0.78
PCF11-207ENST00000624931 LRRC47Q8N1G4 583 aaKnown RBP19.95■□□□□ 0.78
PCF11-207ENST00000624931 CNNM3Q8NE01 707 aa19.95■□□□□ 0.78
PCF11-207ENST00000624931 CCDC34Q96HJ3 373 aa19.95■□□□□ 0.78
PCF11-207ENST00000624931 MAP3K14Q99558 947 aa19.95■□□□□ 0.78
PCF11-207ENST00000624931 GPRC5DQ9NZD1 345 aa19.95■□□□□ 0.78
PCF11-207ENST00000624931 hCG_1642624A0A1W2PR95 340 aa19.94■□□□□ 0.78
PCF11-207ENST00000624931 URI1O94763 535 aaPredicted RBP19.94■□□□□ 0.78
PCF11-207ENST00000624931 IFNAR1P17181 557 aa19.94■□□□□ 0.78
PCF11-207ENST00000624931 CASQ1P31415 396 aa19.94■□□□□ 0.78
PCF11-207ENST00000624931 TBX2Q13207 712 aaPredicted RBP19.94■□□□□ 0.78
PCF11-207ENST00000624931 TUBB2AQ13885 445 aa19.94■□□□□ 0.78
PCF11-207ENST00000624931 CCDC178Q5BJE1 867 aa19.94■□□□□ 0.78
PCF11-207ENST00000624931 TUBB2BQ9BVA1 445 aa19.94■□□□□ 0.78
PCF11-207ENST00000624931 MTMR4Q9NYA4 1195 aa19.94■□□□□ 0.78
PCF11-207ENST00000624931 PGAP2Q9UHJ9 254 aa19.94■□□□□ 0.78
PCF11-207ENST00000624931 KCNH3Q9ULD8 1083 aa19.94■□□□□ 0.78
PCF11-207ENST00000624931 FMNL1O95466 1100 aaPredicted RBP19.93■□□□□ 0.78
PCF11-207ENST00000624931 MARCKSP29966 332 aaPredicted RBP19.93■□□□□ 0.78
PCF11-207ENST00000624931 CYP2C19P33261 490 aa19.93■□□□□ 0.78
PCF11-207ENST00000624931 GPR162Q16538 588 aa19.93■□□□□ 0.78
PCF11-207ENST00000624931 CERKLQ49MI3 558 aaPredicted RBP19.93■□□□□ 0.78
PCF11-207ENST00000624931 FKBP1CQ5VVH2 108 aa19.93■□□□□ 0.78
PCF11-207ENST00000624931 TATDN1Q6P1N9 297 aa19.93■□□□□ 0.78
PCF11-207ENST00000624931 TMTC3Q6ZXV5 915 aa19.93■□□□□ 0.78
PCF11-207ENST00000624931 METTL16Q86W50 562 aaKnown RBP19.93■□□□□ 0.78
PCF11-207ENST00000624931 FOXP4Q8IVH2 680 aaPredicted RBP19.93■□□□□ 0.78
PCF11-207ENST00000624931 KRI1Q8N9T8 703 aaKnown RBP19.93■□□□□ 0.78
PCF11-207ENST00000624931 ENOX1Q8TC92 643 aaKnown RBP19.93■□□□□ 0.78
PCF11-207ENST00000624931 HACL1Q9UJ83 578 aa19.93■□□□□ 0.78
PCF11-207ENST00000624931 PPP2R2CQ9Y2T4 447 aa19.93■□□□□ 0.78
PCF11-207ENST00000624931 CALM1P0DP23 149 aa19.93■□□□□ 0.78
PCF11-207ENST00000624931 CALM2P0DP24 149 aa19.93■□□□□ 0.78
PCF11-207ENST00000624931 CALM3P0DP25 149 aa19.93■□□□□ 0.78
PCF11-207ENST00000624931 ATP1A3P13637 1013 aa19.93■□□□□ 0.78
PCF11-207ENST00000624931 NOVP48745 357 aa19.93■□□□□ 0.78
PCF11-207ENST00000624931 SSRP1Q08945 709 aaKnown RBP19.93■□□□□ 0.78
PCF11-207ENST00000624931 FUT2Q10981 343 aa19.93■□□□□ 0.78
PCF11-207ENST00000624931 RASA3Q14644 834 aa19.93■□□□□ 0.78
PCF11-207ENST00000624931 NT5DC1Q5TFE4 455 aa19.93■□□□□ 0.78
PCF11-207ENST00000624931 FAM83AQ86UY5 434 aa19.93■□□□□ 0.78
PCF11-207ENST00000624931 STAG2Q8N3U4 1231 aa19.93■□□□□ 0.78
PCF11-207ENST00000624931 ZNF579Q8NAF0 562 aaKnown RBP19.93■□□□□ 0.78
PCF11-207ENST00000624931 CTCFLQ8NI51 663 aaPredicted RBP19.93■□□□□ 0.78
PCF11-207ENST00000624931 BAG1Q99933 345 aaPredicted RBP19.93■□□□□ 0.78
PCF11-207ENST00000624931 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.93■□□□□ 0.78
PCF11-207ENST00000624931 MYH6P13533 1939 aa19.92■□□□□ 0.78
PCF11-207ENST00000624931 MYH4Q9Y623 1939 aa19.92■□□□□ 0.78
PCF11-207ENST00000624931 H7C1D1 291 aa19.92■□□□□ 0.78
PCF11-207ENST00000624931 MAP3K9P80192 1104 aa19.92■□□□□ 0.78
PCF11-207ENST00000624931 ATP2B2Q01814 1243 aa19.92■□□□□ 0.78
PCF11-207ENST00000624931 GRM4Q14833 912 aa19.92■□□□□ 0.78
PCF11-207ENST00000624931 SAFBQ15424 915 aaKnown RBP eCLIP19.92■□□□□ 0.78
PCF11-207ENST00000624931 MIGA2Q7L4E1 593 aa19.92■□□□□ 0.78
PCF11-207ENST00000624931 SRBD1Q8N5C6 995 aaKnown RBP19.92■□□□□ 0.78
PCF11-207ENST00000624931 CNTNAP5Q8WYK1 1306 aa19.91■□□□□ 0.78
PCF11-207ENST00000624931 CCDC196A0A1B0GTZ2 297 aa19.91■□□□□ 0.78
PCF11-207ENST00000624931 GOLGA8HP0CJ92 632 aa19.91■□□□□ 0.78
PCF11-207ENST00000624931 SLC35G1Q2M3R5 365 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms