RNA–Protein interactions for RNA: ENST00000624032.3

ATRX-213, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 3,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-213ENST00000624032 USP50Q70EL3 339 aaPredicted RBP13.17□□□□□ -0.3
ATRX-213ENST00000624032 KRT26Q7Z3Y9 468 aa13.17□□□□□ -0.3
ATRX-213ENST00000624032 ACER1Q8TDN7 264 aa13.17□□□□□ -0.3
ATRX-213ENST00000624032 ZNF526Q8TF50 670 aaPredicted RBP13.17□□□□□ -0.3
ATRX-213ENST00000624032 NAT10Q9H0A0 1025 aaKnown RBP13.17□□□□□ -0.3
ATRX-213ENST00000624032 L2HGDHQ9H9P8 463 aa13.17□□□□□ -0.3
ATRX-213ENST00000624032 ST7Q9NRC1 585 aa13.17□□□□□ -0.3
ATRX-213ENST00000624032 CCDC196A0A1B0GTZ2 297 aa13.16□□□□□ -0.3
ATRX-213ENST00000624032 SSRP1Q08945 709 aaKnown RBP13.16□□□□□ -0.3
ATRX-213ENST00000624032 SULF1Q8IWU6 871 aa13.16□□□□□ -0.3
ATRX-213ENST00000624032 GLIS2Q9BZE0 524 aaPredicted RBP13.16□□□□□ -0.3
ATRX-213ENST00000624032 RRAGCQ9HB90 399 aa13.16□□□□□ -0.3
ATRX-213ENST00000624032 IMPACTQ9P2X3 320 aa13.16□□□□□ -0.3
ATRX-213ENST00000624032 RCOR1Q9UKL0 485 aa13.16□□□□□ -0.3
ATRX-213ENST00000624032 SSC5DA1L4H1 1573 aa13.16□□□□□ -0.3
ATRX-213ENST00000624032 CDKL5O76039 1030 aa13.16□□□□□ -0.3
ATRX-213ENST00000624032 FMNL1O95466 1100 aaPredicted RBP13.16□□□□□ -0.3
ATRX-213ENST00000624032 GPCPD1Q9NPB8 672 aa13.16□□□□□ -0.3
ATRX-213ENST00000624032 NYAP2Q9P242 653 aa13.16□□□□□ -0.3
ATRX-213ENST00000624032 V9GY48 417 aaPredicted RBP13.16□□□□□ -0.3
ATRX-213ENST00000624032 PITPNM2Q9BZ72 1349 aa13.16□□□□□ -0.3
ATRX-213ENST00000624032 PDHBP11177 359 aa13.16□□□□□ -0.3
ATRX-213ENST00000624032 ERCC6LQ2NKX8 1250 aa13.16□□□□□ -0.3
ATRX-213ENST00000624032 AOPEPQ8N6M6 819 aa13.16□□□□□ -0.3
ATRX-213ENST00000624032 ZKSCAN4Q969J2 545 aaPredicted RBP13.16□□□□□ -0.3
ATRX-213ENST00000624032 RBM28Q9NW13 759 aaKnown RBP13.16□□□□□ -0.3
ATRX-213ENST00000624032 CLEC11AQ9Y240 323 aa13.16□□□□□ -0.3
ATRX-213ENST00000624032 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.15□□□□□ -0.3
ATRX-213ENST00000624032 IQCA1LA6NCM1 817 aa13.15□□□□□ -0.3
ATRX-213ENST00000624032 PALM3A6NDB9 673 aaPredicted RBP13.15□□□□□ -0.3
ATRX-213ENST00000624032 VEGFAP15692 232 aaPredicted RBP13.15□□□□□ -0.3
ATRX-213ENST00000624032 ALG1Q9BT22 464 aa13.15□□□□□ -0.3
ATRX-213ENST00000624032 UBA5Q9GZZ9 404 aa13.15□□□□□ -0.3
ATRX-213ENST00000624032 GOLPH3LQ9H4A5 285 aa13.15□□□□□ -0.3
ATRX-213ENST00000624032 SCN4AP35499 1836 aa13.15□□□□□ -0.3
ATRX-213ENST00000624032 PARP1P09874 1014 aaKnown RBP13.15□□□□□ -0.3
ATRX-213ENST00000624032 FAM160A1Q05DH4 1040 aa13.15□□□□□ -0.3
ATRX-213ENST00000624032 ZYXQ15942 572 aaKnown RBP13.15□□□□□ -0.3
ATRX-213ENST00000624032 TTBK2Q6IQ55 1244 aa13.15□□□□□ -0.3
ATRX-213ENST00000624032 NUP88Q99567 741 aaPredicted RBP13.15□□□□□ -0.3
ATRX-213ENST00000624032 KLRF2D3W0D1 207 aa13.14□□□□□ -0.31
ATRX-213ENST00000624032 TUBB4AP04350 444 aa13.14□□□□□ -0.31
ATRX-213ENST00000624032 KIF5BP33176 963 aa13.14□□□□□ -0.31
ATRX-213ENST00000624032 KIAA1755Q5JYT7 1200 aa13.14□□□□□ -0.31
ATRX-213ENST00000624032 DCAF15Q66K64 600 aa13.14□□□□□ -0.31
ATRX-213ENST00000624032 KCTD1Q719H9 257 aa13.14□□□□□ -0.31
ATRX-213ENST00000624032 SPICE1Q8N0Z3 855 aa13.14□□□□□ -0.31
ATRX-213ENST00000624032 CCDC150Q8NCX0 1101 aa13.14□□□□□ -0.31
ATRX-213ENST00000624032 MKL1Q969V6 931 aa13.14□□□□□ -0.31
ATRX-213ENST00000624032 WRNIP1Q96S55 665 aa13.14□□□□□ -0.31
ATRX-213ENST00000624032 ZNF341Q9BYN7 854 aa13.14□□□□□ -0.31
ATRX-213ENST00000624032 VAT1LQ9HCJ6 419 aa13.14□□□□□ -0.31
ATRX-213ENST00000624032 CNTNAP5Q8WYK1 1306 aa13.14□□□□□ -0.31
ATRX-213ENST00000624032 WDR90Q96KV7 1748 aa13.14□□□□□ -0.31
ATRX-213ENST00000624032 CYTH3O43739 400 aa13.14□□□□□ -0.31
ATRX-213ENST00000624032 NRDCO43847 1150 aa13.14□□□□□ -0.31
ATRX-213ENST00000624032 CYP2C19P33261 490 aa13.14□□□□□ -0.31
ATRX-213ENST00000624032 FMR1Q06787 632 aaKnown RBP eCLIP13.14□□□□□ -0.313e-7■□□□□ 10.6
ATRX-213ENST00000624032 PPP2R5BQ15173 497 aa13.14□□□□□ -0.31
ATRX-213ENST00000624032 E4F1Q66K89 784 aaPredicted RBP13.14□□□□□ -0.31
ATRX-213ENST00000624032 PPP1R13BQ96KQ4 1090 aa13.14□□□□□ -0.31
ATRX-213ENST00000624032 PPP2R3BQ9Y5P8 575 aa13.14□□□□□ -0.31
ATRX-213ENST00000624032 FHOD1Q9Y613 1164 aa13.14□□□□□ -0.31
ATRX-213ENST00000624032 ATAD5Q96QE3 1844 aa13.14□□□□□ -0.31
ATRX-213ENST00000624032 CLCN6P51797 869 aa13.14□□□□□ -0.31
ATRX-213ENST00000624032 PKN1Q16512 942 aa13.14□□□□□ -0.31
ATRX-213ENST00000624032 CCDC96Q2M329 555 aa13.14□□□□□ -0.31
ATRX-213ENST00000624032 MAP1SQ66K74 1059 aaPredicted RBP13.14□□□□□ -0.31
ATRX-213ENST00000624032 SLFN13Q68D06 897 aa13.14□□□□□ -0.31
ATRX-213ENST00000624032 SYT10Q6XYQ8 523 aa13.14□□□□□ -0.31
ATRX-213ENST00000624032 TRIM22Q8IYM9 498 aa13.14□□□□□ -0.31
ATRX-213ENST00000624032 C8orf76Q96K31 380 aa13.14□□□□□ -0.31
ATRX-213ENST00000624032 ZNF396Q96N95 335 aaPredicted RBP13.14□□□□□ -0.31
ATRX-213ENST00000624032 MAP3K14Q99558 947 aa13.14□□□□□ -0.31
ATRX-213ENST00000624032 MYH6P13533 1939 aa13.14□□□□□ -0.31
ATRX-213ENST00000624032 A0A087WWV3 80 aa13.13□□□□□ -0.31
ATRX-213ENST00000624032 DCAF8L1A6NGE4 600 aa13.13□□□□□ -0.31
ATRX-213ENST00000624032 F5H6K3 240 aa13.13□□□□□ -0.31
ATRX-213ENST00000624032 SLC16A2P36021 539 aa13.13□□□□□ -0.31
ATRX-213ENST00000624032 KLRC3Q07444 240 aa13.13□□□□□ -0.31
ATRX-213ENST00000624032 DHX8Q14562 1220 aaKnown RBP13.13□□□□□ -0.31
ATRX-213ENST00000624032 SUPT20HL1Q3ZLR7 823 aa13.13□□□□□ -0.31
ATRX-213ENST00000624032 ATL3Q6DD88 541 aa13.13□□□□□ -0.31
ATRX-213ENST00000624032 MOB2Q70IA6 237 aa13.13□□□□□ -0.31
ATRX-213ENST00000624032 ENGASEQ8NFI3 743 aa13.13□□□□□ -0.31
ATRX-213ENST00000624032 SHISA4Q96DD7 197 aa13.13□□□□□ -0.31
ATRX-213ENST00000624032 NMRK2Q9NPI5 230 aa13.13□□□□□ -0.31
ATRX-213ENST00000624032 CTNND1O60716 968 aaKnown RBP13.13□□□□□ -0.31
ATRX-213ENST00000624032 USP2O75604 605 aaPredicted RBP13.13□□□□□ -0.31
ATRX-213ENST00000624032 KCNJ6P48051 423 aa13.13□□□□□ -0.31
ATRX-213ENST00000624032 DGKZQ13574 1117 aa13.13□□□□□ -0.31
ATRX-213ENST00000624032 FSIP1Q8NA03 581 aa13.13□□□□□ -0.31
ATRX-213ENST00000624032 CDCA5Q96FF9 252 aa13.13□□□□□ -0.31
ATRX-213ENST00000624032 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.13□□□□□ -0.319e-7■■□□□ 11.9
ATRX-213ENST00000624032 PRPF3O43395 683 aaKnown RBP13.12□□□□□ -0.31
ATRX-213ENST00000624032 NDUFB10O96000 172 aa13.12□□□□□ -0.31
ATRX-213ENST00000624032 ASNSP08243 561 aa13.12□□□□□ -0.31
ATRX-213ENST00000624032 PNMA6AP0CW24 399 aaPredicted RBP13.12□□□□□ -0.31
ATRX-213ENST00000624032 SNHG28P0DPA3 235 aa13.12□□□□□ -0.31
ATRX-213ENST00000624032 SFPQP23246 707 aaKnown RBP eCLIP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms