RNA–Protein interactions for RNA: ENST00000619898.4

SPCS1-206, Transcript of signal peptidase complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPCS1, Length 4,254 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1-206ENST00000619898 C2orf54Q08AI8 447 aa13.68□□□□□ -0.22
SPCS1-206ENST00000619898 TMEM132AQ24JP5 1023 aa13.68□□□□□ -0.22
SPCS1-206ENST00000619898 MB21D1Q8N884 522 aa13.68□□□□□ -0.22
SPCS1-206ENST00000619898 ADD3Q9UEY8 706 aaKnown RBP13.68□□□□□ -0.22
SPCS1-206ENST00000619898 TBCAO75347 108 aaKnown RBP13.67□□□□□ -0.22
SPCS1-206ENST00000619898 TCP1P17987 556 aaKnown RBP13.67□□□□□ -0.22
SPCS1-206ENST00000619898 CCT5P48643 541 aa13.67□□□□□ -0.22
SPCS1-206ENST00000619898 EIF6P56537 245 aaKnown RBP13.67□□□□□ -0.22
SPCS1-206ENST00000619898 TTC19Q6DKK2 380 aaPredicted RBP13.67□□□□□ -0.22
SPCS1-206ENST00000619898 NELFCDQ8IXH7 590 aa13.67□□□□□ -0.22
SPCS1-206ENST00000619898 TEX11Q8IYF3 940 aa13.67□□□□□ -0.22
SPCS1-206ENST00000619898 REXO1Q8N1G1 1221 aaKnown RBP13.67□□□□□ -0.22
SPCS1-206ENST00000619898 TGFBRAP1Q8WUH2 860 aa13.67□□□□□ -0.22
SPCS1-206ENST00000619898 GPCPD1Q9NPB8 672 aa13.67□□□□□ -0.22
SPCS1-206ENST00000619898 BIN2Q9UBW5 565 aaPredicted RBP13.67□□□□□ -0.22
SPCS1-206ENST00000619898 PCP11498 1178 aaKnown RBP13.67□□□□□ -0.22
SPCS1-206ENST00000619898 PRCPP42785 496 aa13.67□□□□□ -0.22
SPCS1-206ENST00000619898 ATP1A2P50993 1020 aa13.67□□□□□ -0.22
SPCS1-206ENST00000619898 PAK2Q13177 524 aa13.67□□□□□ -0.22
SPCS1-206ENST00000619898 CALCRLQ16602 461 aa13.67□□□□□ -0.22
SPCS1-206ENST00000619898 SUSD4Q5VX71 490 aa13.67□□□□□ -0.22
SPCS1-206ENST00000619898 TMTC3Q6ZXV5 915 aa13.67□□□□□ -0.22
SPCS1-206ENST00000619898 FOXP4Q8IVH2 680 aaPredicted RBP13.67□□□□□ -0.22
SPCS1-206ENST00000619898 CNKSR2Q8WXI2 1034 aa13.67□□□□□ -0.22
SPCS1-206ENST00000619898 MAP3K14Q99558 947 aa13.67□□□□□ -0.22
SPCS1-206ENST00000619898 EPB41L4AQ9HCS5 686 aaPredicted RBP13.67□□□□□ -0.22
SPCS1-206ENST00000619898 HDAC6Q9UBN7 1215 aa13.67□□□□□ -0.22
SPCS1-206ENST00000619898 TTC26A0AVF1 554 aa13.67□□□□□ -0.22
SPCS1-206ENST00000619898 CXCR5P32302 372 aa13.67□□□□□ -0.22
SPCS1-206ENST00000619898 GUCY2FP51841 1108 aa13.67□□□□□ -0.22
SPCS1-206ENST00000619898 TRIM65Q6PJ69 517 aa13.67□□□□□ -0.22
SPCS1-206ENST00000619898 B4GALNT4Q76KP1 1039 aa13.67□□□□□ -0.22
SPCS1-206ENST00000619898 P2RX5Q93086 422 aa13.67□□□□□ -0.22
SPCS1-206ENST00000619898 CAPS2Q9BXY5 557 aa13.67□□□□□ -0.22
SPCS1-206ENST00000619898 CDHR2Q9BYE9 1310 aa13.67□□□□□ -0.22
SPCS1-206ENST00000619898 KLRF2D3W0D1 207 aa13.67□□□□□ -0.22
SPCS1-206ENST00000619898 LIG3P49916 1009 aa13.67□□□□□ -0.22
SPCS1-206ENST00000619898 RPS8P62241 208 aaKnown RBP13.67□□□□□ -0.22
SPCS1-206ENST00000619898 MRPS25P82663 173 aaKnown RBP13.67□□□□□ -0.22
SPCS1-206ENST00000619898 DCAF17Q5H9S7 520 aaPredicted RBP13.67□□□□□ -0.22
SPCS1-206ENST00000619898 CCDC65Q8IXS2 484 aa13.67□□□□□ -0.22
SPCS1-206ENST00000619898 NHEJ1Q9H9Q4 299 aaPredicted RBP13.67□□□□□ -0.22
SPCS1-206ENST00000619898 ZNF446Q9NWS9 450 aa13.67□□□□□ -0.22
SPCS1-206ENST00000619898 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.67□□□□□ -0.22
SPCS1-206ENST00000619898 CSF1RP07333 972 aa13.66□□□□□ -0.22
SPCS1-206ENST00000619898 ZNF804AQ7Z570 1209 aa13.66□□□□□ -0.22
SPCS1-206ENST00000619898 DHTKD1Q96HY7 919 aaPredicted RBP13.66□□□□□ -0.22
SPCS1-206ENST00000619898 NYXQ9GZU5 481 aa13.66□□□□□ -0.22
SPCS1-206ENST00000619898 PCDHA4Q9UN74 947 aa13.66□□□□□ -0.22
SPCS1-206ENST00000619898 ACTN4O43707 911 aaKnown RBP13.66□□□□□ -0.22
SPCS1-206ENST00000619898 ZBED6P86452 979 aa13.66□□□□□ -0.22
SPCS1-206ENST00000619898 KLHL30Q0D2K2 578 aa13.66□□□□□ -0.22
SPCS1-206ENST00000619898 UBE4AQ14139 1066 aa13.66□□□□□ -0.22
SPCS1-206ENST00000619898 HERC4Q5GLZ8 1057 aaPredicted RBP13.66□□□□□ -0.22
SPCS1-206ENST00000619898 CCDC121Q6ZUS5 278 aa13.66□□□□□ -0.22
SPCS1-206ENST00000619898 UBLCP1Q8WVY7 318 aaPredicted RBP13.66□□□□□ -0.22
SPCS1-206ENST00000619898 CHP1Q99653 195 aa13.66□□□□□ -0.22
SPCS1-206ENST00000619898 DISC1Q9NRI5 854 aa13.66□□□□□ -0.22
SPCS1-206ENST00000619898 KIAA0753Q2KHM9 967 aa13.66□□□□□ -0.22
SPCS1-206ENST00000619898 SFMBT2Q5VUG0 894 aa13.66□□□□□ -0.22
SPCS1-206ENST00000619898 ERMNQ8TAM6 284 aa13.66□□□□□ -0.22
SPCS1-206ENST00000619898 OVOS2A0A0G2JMS6 1433 aa13.65□□□□□ -0.22
SPCS1-206ENST00000619898 CEP104O60308 925 aa13.65□□□□□ -0.22
SPCS1-206ENST00000619898 FAM98CQ17RN3 349 aaKnown RBP13.65□□□□□ -0.22
SPCS1-206ENST00000619898 SUGCTQ9HAC7 445 aa13.65□□□□□ -0.22
SPCS1-206ENST00000619898 TLDC2A0PJX2 215 aa13.65□□□□□ -0.22
SPCS1-206ENST00000619898 LGALS16A8MUM7 142 aa13.65□□□□□ -0.22
SPCS1-206ENST00000619898 GNPATO15228 680 aa13.65□□□□□ -0.22
SPCS1-206ENST00000619898 NMT2O60551 498 aa13.65□□□□□ -0.22
SPCS1-206ENST00000619898 KCTD16Q68DU8 428 aa13.65□□□□□ -0.22
SPCS1-206ENST00000619898 RASGRP2Q7LDG7 609 aa13.65□□□□□ -0.22
SPCS1-206ENST00000619898 NEK8Q86SG6 692 aa13.65□□□□□ -0.22
SPCS1-206ENST00000619898 RETREG2Q8NC44 543 aa13.65□□□□□ -0.22
SPCS1-206ENST00000619898 ATP8A2Q9NTI2 1148 aa13.65□□□□□ -0.22
SPCS1-206ENST00000619898 SPATA31A3Q5VYP0 1347 aa13.65□□□□□ -0.22
SPCS1-206ENST00000619898 GOLGA6L10A0A0M3HER8 536 aa13.65□□□□□ -0.22
SPCS1-206ENST00000619898 ERVV-1B6SEH8 477 aa13.65□□□□□ -0.22
SPCS1-206ENST00000619898 CCNE1P24864 410 aa13.65□□□□□ -0.22
SPCS1-206ENST00000619898 GSPT2Q8IYD1 628 aaKnown RBP13.65□□□□□ -0.22
SPCS1-206ENST00000619898 LMBR1Q8WVP7 490 aa13.65□□□□□ -0.22
SPCS1-206ENST00000619898 IQCDQ96DY2 449 aa13.65□□□□□ -0.22
SPCS1-206ENST00000619898 PLA2G12BQ9BX93 195 aa13.65□□□□□ -0.22
SPCS1-206ENST00000619898 PEAK1Q9H792 1746 aa13.65□□□□□ -0.22
SPCS1-206ENST00000619898 MAP2K1Q02750 393 aaPredicted RBP13.64□□□□□ -0.23
SPCS1-206ENST00000619898 RASSF7Q02833 373 aa13.64□□□□□ -0.23
SPCS1-206ENST00000619898 ASIC2Q16515 512 aa13.64□□□□□ -0.23
SPCS1-206ENST00000619898 ARL6IP4Q66PJ3 421 aaKnown RBP13.64□□□□□ -0.23
SPCS1-206ENST00000619898 CPLX4Q7Z7G2 160 aa13.64□□□□□ -0.23
SPCS1-206ENST00000619898 FBXL16Q8N461 479 aa13.64□□□□□ -0.23
SPCS1-206ENST00000619898 CCDC114Q96M63 670 aa13.64□□□□□ -0.23
SPCS1-206ENST00000619898 THAP9Q9H5L6 903 aa13.64□□□□□ -0.23
SPCS1-206ENST00000619898 KDM6AO15550 1401 aaPredicted RBP13.64□□□□□ -0.23
SPCS1-206ENST00000619898 CETN3O15182 167 aa13.64□□□□□ -0.23
SPCS1-206ENST00000619898 GYPCP04921 128 aa13.64□□□□□ -0.23
SPCS1-206ENST00000619898 TOB1P50616 345 aaPredicted RBP13.64□□□□□ -0.23
SPCS1-206ENST00000619898 RCAN1P53805 252 aa13.64□□□□□ -0.23
SPCS1-206ENST00000619898 PTPROQ16827 1216 aa13.64□□□□□ -0.23
SPCS1-206ENST00000619898 TRMT1LQ7Z2T5 733 aaKnown RBP13.64□□□□□ -0.23
SPCS1-206ENST00000619898 LZTS2Q9BRK4 669 aa13.64□□□□□ -0.23
SPCS1-206ENST00000619898 MTA3Q9BTC8 594 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms