RNA–Protein interactions for RNA: ENST00000619707.4

C9orf72-206, Transcript of chromosome 9 open reading frame 72, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf72, Length 3,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-206ENST00000619707 SNX12Q9UMY4 172 aa9.71□□□□□ -0.86
C9orf72-206ENST00000619707 TRIM28Q13263 835 aaKnown RBP9.7□□□□□ -0.86
C9orf72-206ENST00000619707 CCDC96Q2M329 555 aa9.7□□□□□ -0.86
C9orf72-206ENST00000619707 ALS2CLQ60I27 953 aa9.7□□□□□ -0.86
C9orf72-206ENST00000619707 OTUD6BQ8N6M0 293 aa9.7□□□□□ -0.86
C9orf72-206ENST00000619707 TRIM58Q8NG06 486 aa9.7□□□□□ -0.86
C9orf72-206ENST00000619707 LRRC1Q9BTT6 524 aa9.7□□□□□ -0.86
C9orf72-206ENST00000619707 NUP58Q9BVL2 599 aa9.7□□□□□ -0.86
C9orf72-206ENST00000619707 THAP9Q9H5L6 903 aa9.7□□□□□ -0.86
C9orf72-206ENST00000619707 CAPN7Q9Y6W3 813 aa9.7□□□□□ -0.86
C9orf72-206ENST00000619707 DUSP10Q9Y6W6 482 aa9.7□□□□□ -0.86
C9orf72-206ENST00000619707 TNKSO95271 1327 aa9.7□□□□□ -0.86
C9orf72-206ENST00000619707 TRPM3Q9HCF6 1732 aaPredicted RBP9.7□□□□□ -0.86
C9orf72-206ENST00000619707 B4DLN1 442 aa9.7□□□□□ -0.86
C9orf72-206ENST00000619707 PRPF3O43395 683 aaKnown RBP9.7□□□□□ -0.86
C9orf72-206ENST00000619707 USO1O60763 962 aaKnown RBP9.7□□□□□ -0.86
C9orf72-206ENST00000619707 TACC1O75410 805 aa9.7□□□□□ -0.86
C9orf72-206ENST00000619707 STAT6P42226 847 aa9.7□□□□□ -0.86
C9orf72-206ENST00000619707 MATR3P43243 847 aaKnown RBP eCLIP9.7□□□□□ -0.86
C9orf72-206ENST00000619707 VAV2P52735 878 aa9.7□□□□□ -0.86
C9orf72-206ENST00000619707 CYP27A1Q02318 531 aa9.7□□□□□ -0.86
C9orf72-206ENST00000619707 EZH2Q15910 746 aaKnown RBP9.7□□□□□ -0.86
C9orf72-206ENST00000619707 CCDC181Q5TID7 509 aa9.7□□□□□ -0.86
C9orf72-206ENST00000619707 EMBQ6PCB8 327 aa9.7□□□□□ -0.86
C9orf72-206ENST00000619707 KCNV1Q6PIU1 500 aa9.7□□□□□ -0.86
C9orf72-206ENST00000619707 ADSSL1Q8N142 457 aa9.7□□□□□ -0.86
C9orf72-206ENST00000619707 VGLL2Q8N8G2 317 aa9.7□□□□□ -0.86
C9orf72-206ENST00000619707 SGSM3Q96HU1 749 aa9.7□□□□□ -0.86
C9orf72-206ENST00000619707 AGPAT5Q9NUQ2 364 aa9.7□□□□□ -0.86
C9orf72-206ENST00000619707 EXOC1Q9NV70 894 aa9.7□□□□□ -0.86
C9orf72-206ENST00000619707 MYH13Q9UKX3 1938 aa9.69□□□□□ -0.86
C9orf72-206ENST00000619707 NUTM2BA6NNL0 878 aaPredicted RBP9.69□□□□□ -0.86
C9orf72-206ENST00000619707 NUTM2EB1AL46 878 aaPredicted RBP9.69□□□□□ -0.86
C9orf72-206ENST00000619707 PSMA7O14818 248 aa9.69□□□□□ -0.86
C9orf72-206ENST00000619707 EPB41P11171 864 aaKnown RBP9.69□□□□□ -0.86
C9orf72-206ENST00000619707 MCM7P33993 719 aa9.69□□□□□ -0.86
C9orf72-206ENST00000619707 SKOR1P84550 965 aa9.69□□□□□ -0.86
C9orf72-206ENST00000619707 ZBED6P86452 979 aa9.69□□□□□ -0.86
C9orf72-206ENST00000619707 PDCLQ13371 301 aa9.69□□□□□ -0.86
C9orf72-206ENST00000619707 SPATS2Q86XZ4 545 aaKnown RBP9.69□□□□□ -0.86
C9orf72-206ENST00000619707 CREG2Q8IUH2 290 aa9.69□□□□□ -0.86
C9orf72-206ENST00000619707 SYNE4Q8N205 404 aa9.69□□□□□ -0.86
C9orf72-206ENST00000619707 LCORLQ8N3X6 602 aa9.69□□□□□ -0.86
C9orf72-206ENST00000619707 RETREG2Q8NC44 543 aa9.69□□□□□ -0.86
C9orf72-206ENST00000619707 RASSF8Q8NHQ8 419 aa9.69□□□□□ -0.86
C9orf72-206ENST00000619707 HDAC7Q8WUI4 952 aa9.69□□□□□ -0.86
C9orf72-206ENST00000619707 ESR2Q92731 530 aa9.69□□□□□ -0.86
C9orf72-206ENST00000619707 PURBQ96QR8 312 aaKnown RBP9.69□□□□□ -0.86
C9orf72-206ENST00000619707 DMGDHQ9UI17 866 aaKnown RBP9.69□□□□□ -0.86
C9orf72-206ENST00000619707 DISP2A7MBM2 1401 aa9.69□□□□□ -0.86
C9orf72-206ENST00000619707 SRGNP10124 158 aa9.69□□□□□ -0.86
C9orf72-206ENST00000619707 GSCP56915 257 aaPredicted RBP9.69□□□□□ -0.86
C9orf72-206ENST00000619707 ITIH3Q06033 890 aa9.69□□□□□ -0.86
C9orf72-206ENST00000619707 PPARAQ07869 468 aa9.69□□□□□ -0.86
C9orf72-206ENST00000619707 CATIPQ7Z7H3 387 aa9.69□□□□□ -0.86
C9orf72-206ENST00000619707 PRPF38AQ8NAV1 312 aaKnown RBP9.69□□□□□ -0.86
C9orf72-206ENST00000619707 SPATA4Q8NEY3 305 aa9.69□□□□□ -0.86
C9orf72-206ENST00000619707 CCDC42Q96M95 316 aa9.69□□□□□ -0.86
C9orf72-206ENST00000619707 ATXN2Q99700 1313 aaKnown RBP9.69□□□□□ -0.86
C9orf72-206ENST00000619707 MINDY4BA8MYZ0 360 aa9.69□□□□□ -0.86
C9orf72-206ENST00000619707 CTSWP56202 376 aa9.69□□□□□ -0.86
C9orf72-206ENST00000619707 SLC7A5Q01650 507 aa9.69□□□□□ -0.86
C9orf72-206ENST00000619707 TBC1D8BQ0IIM8 1120 aa9.69□□□□□ -0.86
C9orf72-206ENST00000619707 PUM3Q15397 648 aaKnown RBP9.69□□□□□ -0.86
C9orf72-206ENST00000619707 CHRNA2Q15822 529 aa9.69□□□□□ -0.86
C9orf72-206ENST00000619707 PIK3AP1Q6ZUJ8 805 aa9.69□□□□□ -0.86
C9orf72-206ENST00000619707 MICALCLQ6ZW33 695 aa9.69□□□□□ -0.86
C9orf72-206ENST00000619707 ARMCX6Q7L4S7 300 aa9.69□□□□□ -0.86
C9orf72-206ENST00000619707 EGFL6Q8IUX8 553 aa9.69□□□□□ -0.86
C9orf72-206ENST00000619707 LPIN2Q92539 896 aa9.69□□□□□ -0.86
C9orf72-206ENST00000619707 ARL8AQ96BM9 186 aa9.69□□□□□ -0.86
C9orf72-206ENST00000619707 CABS1Q96KC9 395 aa9.69□□□□□ -0.86
C9orf72-206ENST00000619707 CXorf56Q9H5V9 222 aa9.69□□□□□ -0.86
C9orf72-206ENST00000619707 RBM28Q9NW13 759 aaKnown RBP9.69□□□□□ -0.86
C9orf72-206ENST00000619707 STIM2Q9P246 746 aa9.69□□□□□ -0.86
C9orf72-206ENST00000619707 LRWD1Q9UFC0 647 aa9.69□□□□□ -0.86
C9orf72-206ENST00000619707 MAFGO15525 162 aa9.68□□□□□ -0.86
C9orf72-206ENST00000619707 ZEB2O60315 1214 aa9.68□□□□□ -0.86
C9orf72-206ENST00000619707 PLEKHA8P1O95397 391 aa9.68□□□□□ -0.86
C9orf72-206ENST00000619707 PMS1P54277 932 aaKnown RBP9.68□□□□□ -0.86
C9orf72-206ENST00000619707 SEC23AQ15436 765 aa9.68□□□□□ -0.86
C9orf72-206ENST00000619707 TTMPQ5BVD1 217 aa9.68□□□□□ -0.86
C9orf72-206ENST00000619707 NOC3LQ8WTT2 800 aaKnown RBP9.68□□□□□ -0.86
C9orf72-206ENST00000619707 TNFRSF25Q93038 417 aa9.68□□□□□ -0.86
C9orf72-206ENST00000619707 TUBGCP2Q9BSJ2 902 aa9.68□□□□□ -0.86
C9orf72-206ENST00000619707 FER1L4A9Z1Z3 1794 aa9.68□□□□□ -0.86
C9orf72-206ENST00000619707 SOS2Q07890 1332 aaPredicted RBP9.68□□□□□ -0.86
C9orf72-206ENST00000619707 TCP1P17987 556 aaKnown RBP9.68□□□□□ -0.86
C9orf72-206ENST00000619707 GPTP24298 496 aa9.68□□□□□ -0.86
C9orf72-206ENST00000619707 ATP6V1AP38606 617 aa9.68□□□□□ -0.86
C9orf72-206ENST00000619707 PAFAH1B1P43034 410 aa9.68□□□□□ -0.86
C9orf72-206ENST00000619707 TRAPPC10P48553 1259 aa9.68□□□□□ -0.86
C9orf72-206ENST00000619707 ATP1A2P50993 1020 aa9.68□□□□□ -0.86
C9orf72-206ENST00000619707 MRPS25P82663 173 aaKnown RBP9.68□□□□□ -0.86
C9orf72-206ENST00000619707 IFIT1BQ5T764 474 aaKnown RBP9.68□□□□□ -0.86
C9orf72-206ENST00000619707 ZNF572Q7Z3I7 529 aaPredicted RBP9.68□□□□□ -0.86
C9orf72-206ENST00000619707 MIGA1Q8NAN2 632 aa9.68□□□□□ -0.86
C9orf72-206ENST00000619707 TSEN2Q8NCE0 465 aaKnown RBP9.68□□□□□ -0.86
C9orf72-206ENST00000619707 HELBQ8NG08 1087 aaPredicted RBP9.68□□□□□ -0.86
C9orf72-206ENST00000619707 SMCR8Q8TEV9 937 aaPredicted RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms