RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 KAT14Q9H8E8 782 aa9.67□□□□□ -0.86
NEK3-209ENST00000618856 LY9Q9HBG7 655 aa9.67□□□□□ -0.86
NEK3-209ENST00000618856 SENP2Q9HC62 589 aa9.67□□□□□ -0.86
NEK3-209ENST00000618856 RAVER2Q9HCJ3 691 aaKnown RBP9.67□□□□□ -0.86
NEK3-209ENST00000618856 MAD2L2Q9UI95 211 aa9.67□□□□□ -0.86
NEK3-209ENST00000618856 FRMPD2Q68DX3 1309 aaPredicted RBP9.66□□□□□ -0.86
NEK3-209ENST00000618856 RPTORQ8N122 1335 aa9.66□□□□□ -0.86
NEK3-209ENST00000618856 SH2B2O14492 632 aaPredicted RBP9.66□□□□□ -0.86
NEK3-209ENST00000618856 IFIT3O14879 490 aaKnown RBP9.66□□□□□ -0.86
NEK3-209ENST00000618856 ZKSCAN1P17029 563 aaPredicted RBP9.66□□□□□ -0.86
NEK3-209ENST00000618856 SLC16A2P36021 539 aa9.66□□□□□ -0.86
NEK3-209ENST00000618856 GJA8P48165 433 aa9.66□□□□□ -0.86
NEK3-209ENST00000618856 SOX10P56693 466 aa9.66□□□□□ -0.86
NEK3-209ENST00000618856 PLS1Q14651 629 aa9.66□□□□□ -0.86
NEK3-209ENST00000618856 GRM4Q14833 912 aa9.66□□□□□ -0.86
NEK3-209ENST00000618856 SLC35G1Q2M3R5 365 aa9.66□□□□□ -0.86
NEK3-209ENST00000618856 RNF20Q5VTR2 975 aa9.66□□□□□ -0.86
NEK3-209ENST00000618856 ZNF467Q7Z7K2 595 aaPredicted RBP9.66□□□□□ -0.86
NEK3-209ENST00000618856 SGMS1Q86VZ5 419 aa9.66□□□□□ -0.86
NEK3-209ENST00000618856 CCAR1Q8IX12 1150 aaKnown RBP9.66□□□□□ -0.86
NEK3-209ENST00000618856 MSL3Q8N5Y2 521 aaKnown RBP9.66□□□□□ -0.86
NEK3-209ENST00000618856 SHISA4Q96DD7 197 aa9.66□□□□□ -0.86
NEK3-209ENST00000618856 MAML3Q96JK9 1138 aa9.66□□□□□ -0.86
NEK3-209ENST00000618856 TMEM87BQ96K49 555 aa9.66□□□□□ -0.86
NEK3-209ENST00000618856 FGD4Q96M96 766 aa9.66□□□□□ -0.86
NEK3-209ENST00000618856 AGBL1Q96MI9 1066 aa9.66□□□□□ -0.86
NEK3-209ENST00000618856 MMP19Q99542 508 aa9.66□□□□□ -0.86
NEK3-209ENST00000618856 UNC93B1Q9H1C4 597 aa9.66□□□□□ -0.86
NEK3-209ENST00000618856 GPCPD1Q9NPB8 672 aa9.66□□□□□ -0.86
NEK3-209ENST00000618856 FBXO40Q9UH90 709 aa9.66□□□□□ -0.86
NEK3-209ENST00000618856 PNMA2Q9UL42 364 aa9.66□□□□□ -0.86
NEK3-209ENST00000618856 IVNS1ABPQ9Y6Y0 642 aa9.66□□□□□ -0.86
NEK3-209ENST00000618856 ZNFX1Q9P2E3 1918 aaKnown RBP9.65□□□□□ -0.86
NEK3-209ENST00000618856 PRC1O43663 620 aa9.65□□□□□ -0.86
NEK3-209ENST00000618856 REC8O95072 547 aa9.65□□□□□ -0.86
NEK3-209ENST00000618856 SGPL1O95470 568 aa9.65□□□□□ -0.86
NEK3-209ENST00000618856 GOLGA8HP0CJ92 632 aa9.65□□□□□ -0.86
NEK3-209ENST00000618856 GHRHRQ02643 423 aa9.65□□□□□ -0.86
NEK3-209ENST00000618856 CACNB2Q08289 660 aaPredicted RBP9.65□□□□□ -0.86
NEK3-209ENST00000618856 KRT32Q14532 448 aa9.65□□□□□ -0.86
NEK3-209ENST00000618856 KCTD2Q14681 263 aa9.65□□□□□ -0.86
NEK3-209ENST00000618856 WTAPQ15007 396 aa9.65□□□□□ -0.86
NEK3-209ENST00000618856 SART3Q15020 963 aaKnown RBP9.65□□□□□ -0.86
NEK3-209ENST00000618856 CCDC96Q2M329 555 aa9.65□□□□□ -0.86
NEK3-209ENST00000618856 ADCK5Q3MIX3 580 aa9.65□□□□□ -0.86
NEK3-209ENST00000618856 LHX8Q68G74 356 aa9.65□□□□□ -0.86
NEK3-209ENST00000618856 MAMDC4Q6UXC1 1216 aa9.65□□□□□ -0.86
NEK3-209ENST00000618856 CHST3Q7LGC8 479 aa9.65□□□□□ -0.86
NEK3-209ENST00000618856 CPXCR1Q8N123 301 aa9.65□□□□□ -0.86
NEK3-209ENST00000618856 TMTC2Q8N394 836 aa9.65□□□□□ -0.86
NEK3-209ENST00000618856 STAG2Q8N3U4 1231 aa9.65□□□□□ -0.86
NEK3-209ENST00000618856 FAM133AQ8N9E0 248 aa9.65□□□□□ -0.86
NEK3-209ENST00000618856 RGS22Q8NE09 1264 aa9.65□□□□□ -0.86
NEK3-209ENST00000618856 CLEC4DQ8WXI8 215 aa9.65□□□□□ -0.86
NEK3-209ENST00000618856 IL17RAQ96F46 866 aa9.65□□□□□ -0.86
NEK3-209ENST00000618856 NEK1Q96PY6 1258 aa9.65□□□□□ -0.86
NEK3-209ENST00000618856 USP26Q9BXU7 913 aa9.65□□□□□ -0.86
NEK3-209ENST00000618856 ACAD9Q9H845 621 aa9.65□□□□□ -0.86
NEK3-209ENST00000618856 JMJD4Q9H9V9 463 aa9.65□□□□□ -0.86
NEK3-209ENST00000618856 GPHNQ9NQX3 736 aaPredicted RBP9.65□□□□□ -0.86
NEK3-209ENST00000618856 NRBP1Q9UHY1 535 aa9.65□□□□□ -0.86
NEK3-209ENST00000618856 KIAA0100Q14667 2235 aaKnown RBP9.65□□□□□ -0.86
NEK3-209ENST00000618856 CYTH3O43739 400 aa9.64□□□□□ -0.87
NEK3-209ENST00000618856 DDAH1O94760 285 aa9.64□□□□□ -0.87
NEK3-209ENST00000618856 PGK2P07205 417 aa9.64□□□□□ -0.87
NEK3-209ENST00000618856 HMGB1P09429 215 aaKnown RBP9.64□□□□□ -0.87
NEK3-209ENST00000618856 PARP1P09874 1014 aaKnown RBP9.64□□□□□ -0.87
NEK3-209ENST00000618856 CYBAP13498 195 aa9.64□□□□□ -0.87
NEK3-209ENST00000618856 PRKAR2AP13861 404 aaKnown RBP9.64□□□□□ -0.87
NEK3-209ENST00000618856 EN2P19622 333 aaPredicted RBP9.64□□□□□ -0.87
NEK3-209ENST00000618856 SMARCA1P28370 1054 aa9.64□□□□□ -0.87
NEK3-209ENST00000618856 MNX1P50219 401 aaPredicted RBP9.64□□□□□ -0.87
NEK3-209ENST00000618856 SNAP25P60880 206 aa9.64□□□□□ -0.87
NEK3-209ENST00000618856 TMEM67Q5HYA8 995 aa9.64□□□□□ -0.87
NEK3-209ENST00000618856 WDR78Q5VTH9 848 aa9.64□□□□□ -0.87
NEK3-209ENST00000618856 DHX32Q7L7V1 743 aaKnown RBP9.64□□□□□ -0.87
NEK3-209ENST00000618856 DPP9Q86TI2 863 aa9.64□□□□□ -0.87
NEK3-209ENST00000618856 ADGRF4Q8IZF3 695 aa9.64□□□□□ -0.87
NEK3-209ENST00000618856 TRPV1Q8NER1 839 aa9.64□□□□□ -0.87
NEK3-209ENST00000618856 CHMP4CQ96CF2 233 aa9.64□□□□□ -0.87
NEK3-209ENST00000618856 TRERF1Q96PN7 1200 aa9.64□□□□□ -0.87
NEK3-209ENST00000618856 TMEM106CQ9BVX2 250 aa9.64□□□□□ -0.87
NEK3-209ENST00000618856 AGXT2Q9BYV1 514 aa9.64□□□□□ -0.87
NEK3-209ENST00000618856 UBA5Q9GZZ9 404 aa9.64□□□□□ -0.87
NEK3-209ENST00000618856 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.64□□□□□ -0.87
NEK3-209ENST00000618856 RNF208Q9H0X6 261 aa9.64□□□□□ -0.87
NEK3-209ENST00000618856 CPVLQ9H3G5 476 aa9.64□□□□□ -0.87
NEK3-209ENST00000618856 RIOX1Q9H6W3 641 aa9.64□□□□□ -0.87
NEK3-209ENST00000618856 HMX1Q9NP08 348 aaPredicted RBP9.64□□□□□ -0.87
NEK3-209ENST00000618856 A1CFQ9NQ94 594 aaKnown RBP9.64□□□□□ -0.87
NEK3-209ENST00000618856 RNF146Q9NTX7 359 aa9.64□□□□□ -0.87
NEK3-209ENST00000618856 SLC5A4Q9NY91 659 aa9.64□□□□□ -0.87
NEK3-209ENST00000618856 CYP39A1Q9NYL5 469 aa9.64□□□□□ -0.87
NEK3-209ENST00000618856 OGDHLQ9ULD0 1010 aa9.64□□□□□ -0.87
NEK3-209ENST00000618856 SNX14Q9Y5W7 946 aa9.64□□□□□ -0.87
NEK3-209ENST00000618856 PLXNA1Q9UIW2 1896 aa9.64□□□□□ -0.87
NEK3-209ENST00000618856 ASTN1O14525 1302 aa9.63□□□□□ -0.87
NEK3-209ENST00000618856 SYNGAP1Q96PV0 1343 aa9.63□□□□□ -0.87
NEK3-209ENST00000618856 LCTP09848 1927 aa9.63□□□□□ -0.87
NEK3-209ENST00000618856 LOC102724159A0A0B4J2E5 919 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms