RNA–Protein interactions for RNA: ENST00000614825.4

DDB2-208, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 3

Gene DDB2, Length 852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-208ENST00000614825 TRERF1Q96PN7 1200 aa13.68□□□□□ -0.22
DDB2-208ENST00000614825 TMEM47Q9BQJ4 181 aa13.68□□□□□ -0.22
DDB2-208ENST00000614825 ZKSCAN3Q9BRR0 538 aa13.68□□□□□ -0.22
DDB2-208ENST00000614825 UBE2OQ9C0C9 1292 aaKnown RBP13.68□□□□□ -0.22
DDB2-208ENST00000614825 ACAD9Q9H845 621 aa13.68□□□□□ -0.22
DDB2-208ENST00000614825 PRDM5Q9NQX1 630 aaPredicted RBP13.68□□□□□ -0.22
DDB2-208ENST00000614825 PRKAG2Q9UGJ0 569 aa13.68□□□□□ -0.22
DDB2-208ENST00000614825 PRR12Q9ULL5 1215 aa13.68□□□□□ -0.22
DDB2-208ENST00000614825 FRMPD3Q5JV73 1810 aa13.68□□□□□ -0.22
DDB2-208ENST00000614825 POTEB2H3BUK9 544 aa13.67□□□□□ -0.22
DDB2-208ENST00000614825 ZNF865P0CJ78 1059 aaPredicted RBP13.67□□□□□ -0.22
DDB2-208ENST00000614825 FDX1P10109 184 aa13.67□□□□□ -0.22
DDB2-208ENST00000614825 TOP1P11387 765 aaKnown RBP13.67□□□□□ -0.22
DDB2-208ENST00000614825 AKR1A1P14550 325 aa13.67□□□□□ -0.22
DDB2-208ENST00000614825 CNTN2Q02246 1040 aa13.67□□□□□ -0.22
DDB2-208ENST00000614825 RNF180Q86T96 592 aa13.67□□□□□ -0.22
DDB2-208ENST00000614825 DCAF4Q8WV16 495 aa13.67□□□□□ -0.22
DDB2-208ENST00000614825 LBHD1Q9BQE6 289 aaPredicted RBP13.67□□□□□ -0.22
DDB2-208ENST00000614825 PRO3102Q9H379 93 aa13.67□□□□□ -0.22
DDB2-208ENST00000614825 RNF41Q9H4P4 317 aaPredicted RBP13.67□□□□□ -0.22
DDB2-208ENST00000614825 NRBP1Q9UHY1 535 aa13.67□□□□□ -0.22
DDB2-208ENST00000614825 CCPG1Q9ULG6 757 aa13.67□□□□□ -0.22
DDB2-208ENST00000614825 PLXNA1Q9UIW2 1896 aa13.67□□□□□ -0.22
DDB2-208ENST00000614825 NEDD4P46934 1319 aa13.66□□□□□ -0.22
DDB2-208ENST00000614825 DNAJC25-GNG10A0A024R161 153 aa13.66□□□□□ -0.22
DDB2-208ENST00000614825 SNAI1O95863 264 aaPredicted RBP13.66□□□□□ -0.22
DDB2-208ENST00000614825 FGRP09769 529 aa13.66□□□□□ -0.22
DDB2-208ENST00000614825 NSMFQ6X4W1 530 aa13.66□□□□□ -0.22
DDB2-208ENST00000614825 SLC39A5Q6ZMH5 540 aa13.66□□□□□ -0.22
DDB2-208ENST00000614825 NOL8Q76FK4 1167 aaKnown RBP13.66□□□□□ -0.22
DDB2-208ENST00000614825 ESR2Q92731 530 aa13.66□□□□□ -0.22
DDB2-208ENST00000614825 GDF15Q99988 308 aa13.66□□□□□ -0.22
DDB2-208ENST00000614825 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.66□□□□□ -0.22
DDB2-208ENST00000614825 FAM184BQ9ULE4 1060 aa13.66□□□□□ -0.22
DDB2-208ENST00000614825 ZNF536O15090 1300 aa13.65□□□□□ -0.22
DDB2-208ENST00000614825 ZMYM6O95789 1325 aa13.65□□□□□ -0.22
DDB2-208ENST00000614825 SYNGAP1Q96PV0 1343 aa13.65□□□□□ -0.22
DDB2-208ENST00000614825 KDM4AO75164 1064 aa13.65□□□□□ -0.22
DDB2-208ENST00000614825 PDE4AP27815 886 aa13.65□□□□□ -0.22
DDB2-208ENST00000614825 ACVR2BQ13705 512 aa13.65□□□□□ -0.22
DDB2-208ENST00000614825 TRIM60Q495X7 471 aa13.65□□□□□ -0.22
DDB2-208ENST00000614825 MUM1L1Q5H9M0 696 aa13.65□□□□□ -0.22
DDB2-208ENST00000614825 SYDE2Q5VT97 1194 aa13.65□□□□□ -0.22
DDB2-208ENST00000614825 ARMCX2Q7L311 632 aa13.65□□□□□ -0.22
DDB2-208ENST00000614825 CCDC144CPQ8IYA2 1237 aa13.65□□□□□ -0.22
DDB2-208ENST00000614825 MSL3Q8N5Y2 521 aaKnown RBP13.65□□□□□ -0.22
DDB2-208ENST00000614825 A1CFQ9NQ94 594 aaKnown RBP13.65□□□□□ -0.22
DDB2-208ENST00000614825 SMCHD1A6NHR9 2005 aa13.64□□□□□ -0.23
DDB2-208ENST00000614825 B4E1Z4 1266 aa13.64□□□□□ -0.23
DDB2-208ENST00000614825 SOX1O00570 391 aaPredicted RBP13.64□□□□□ -0.23
DDB2-208ENST00000614825 PLA2G6O60733 806 aa13.64□□□□□ -0.23
DDB2-208ENST00000614825 C6orf222P0C671 652 aaPredicted RBP13.64□□□□□ -0.23
DDB2-208ENST00000614825 IMMTQ16891 758 aaKnown RBP13.64□□□□□ -0.23
DDB2-208ENST00000614825 TKFCQ3LXA3 575 aa13.64□□□□□ -0.23
DDB2-208ENST00000614825 CCDC144BQ3MJ40 725 aa13.64□□□□□ -0.23
DDB2-208ENST00000614825 TTC22Q5TAA0 569 aa13.64□□□□□ -0.23
DDB2-208ENST00000614825 MAMDC4Q6UXC1 1216 aa13.64□□□□□ -0.23
DDB2-208ENST00000614825 ZNF467Q7Z7K2 595 aaPredicted RBP13.64□□□□□ -0.23
DDB2-208ENST00000614825 VTI1AQ96AJ9 217 aa13.64□□□□□ -0.23
DDB2-208ENST00000614825 LRCH3Q96II8 777 aa13.64□□□□□ -0.23
DDB2-208ENST00000614825 TCP11L1Q9NUJ3 509 aa13.64□□□□□ -0.23
DDB2-208ENST00000614825 DDX49Q9Y6V7 483 aaKnown RBP13.64□□□□□ -0.23
DDB2-208ENST00000614825 A0A1W2PPC1 479 aa13.63□□□□□ -0.23
DDB2-208ENST00000614825 GOLGA8HP0CJ92 632 aa13.63□□□□□ -0.23
DDB2-208ENST00000614825 PDHBP11177 359 aa13.63□□□□□ -0.23
DDB2-208ENST00000614825 PCP11498 1178 aaKnown RBP13.63□□□□□ -0.23
DDB2-208ENST00000614825 GSPT1P15170 499 aaKnown RBP13.63□□□□□ -0.23
DDB2-208ENST00000614825 BMP8BP34820 402 aa13.63□□□□□ -0.23
DDB2-208ENST00000614825 EEPD1Q7L9B9 569 aa13.63□□□□□ -0.23
DDB2-208ENST00000614825 IQCA1Q86XH1 822 aa13.63□□□□□ -0.23
DDB2-208ENST00000614825 FGD4Q96M96 766 aa13.63□□□□□ -0.23
DDB2-208ENST00000614825 ABHD16BQ9H3Z7 469 aa13.63□□□□□ -0.23
DDB2-208ENST00000614825 KAT14Q9H8E8 782 aa13.63□□□□□ -0.23
DDB2-208ENST00000614825 SPC25Q9HBM1 224 aa13.63□□□□□ -0.23
DDB2-208ENST00000614825 CTNNA3Q9UI47 895 aa13.63□□□□□ -0.23
DDB2-208ENST00000614825 SYNRGQ9UMZ2 1314 aa13.63□□□□□ -0.23
DDB2-208ENST00000614825 A0A1W2PQ45 241 aaPredicted RBP13.62□□□□□ -0.23
DDB2-208ENST00000614825 A0A1W2PQY0 241 aa13.62□□□□□ -0.23
DDB2-208ENST00000614825 PTPDC1A2A3K4 754 aa13.62□□□□□ -0.23
DDB2-208ENST00000614825 SOWAHBA6NEL2 793 aa13.62□□□□□ -0.23
DDB2-208ENST00000614825 ASB14A6NK59 587 aa13.62□□□□□ -0.23
DDB2-208ENST00000614825 PQBP1O60828 265 aaKnown RBP13.62□□□□□ -0.23
DDB2-208ENST00000614825 ICAM1P05362 532 aa13.62□□□□□ -0.23
DDB2-208ENST00000614825 NOVP48745 357 aa13.62□□□□□ -0.23
DDB2-208ENST00000614825 IRX5P78411 483 aaPredicted RBP13.62□□□□□ -0.23
DDB2-208ENST00000614825 TLE2Q04725 743 aa13.62□□□□□ -0.23
DDB2-208ENST00000614825 TDHQ8IZJ6 230 aa13.62□□□□□ -0.23
DDB2-208ENST00000614825 FAM133AQ8N9E0 248 aa13.62□□□□□ -0.23
DDB2-208ENST00000614825 TTC14Q96N46 770 aa13.62□□□□□ -0.23
DDB2-208ENST00000614825 PURBQ96QR8 312 aaKnown RBP13.62□□□□□ -0.23
DDB2-208ENST00000614825 DSCC1Q9BVC3 393 aa13.62□□□□□ -0.23
DDB2-208ENST00000614825 RANBP17Q9H2T7 1088 aaKnown RBP13.62□□□□□ -0.23
DDB2-208ENST00000614825 CPVLQ9H3G5 476 aa13.62□□□□□ -0.23
DDB2-208ENST00000614825 CYP39A1Q9NYL5 469 aa13.62□□□□□ -0.23
DDB2-208ENST00000614825 PHF24Q9UPV7 400 aa13.62□□□□□ -0.23
DDB2-208ENST00000614825 RANBP2P49792 3224 aaKnown RBP13.62□□□□□ -0.23
DDB2-208ENST00000614825 MYADML2A6NDP7 307 aa13.61□□□□□ -0.23
DDB2-208ENST00000614825 DHX16O60231 1041 aaKnown RBP13.61□□□□□ -0.23
DDB2-208ENST00000614825 ADAMTS4O75173 837 aa13.61□□□□□ -0.23
DDB2-208ENST00000614825 DUSP11O75319 330 aaKnown RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms