RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 NEDD1Q8NHV4 660 aa18.61■□□□□ 0.57
CNOT3-208ENST00000613073 VAT1LQ9HCJ6 419 aa18.61■□□□□ 0.57
CNOT3-208ENST00000613073 USP40Q9NVE5 1235 aa18.6■□□□□ 0.57
CNOT3-208ENST00000613073 HOOK1Q9UJC3 728 aaKnown RBP18.6■□□□□ 0.57
CNOT3-208ENST00000613073 ACTN4O43707 911 aaKnown RBP18.6■□□□□ 0.57
CNOT3-208ENST00000613073 SLURP2P0DP57 97 aa18.6■□□□□ 0.57
CNOT3-208ENST00000613073 CASP1P29466 404 aa18.6■□□□□ 0.57
CNOT3-208ENST00000613073 AFMP43652 599 aa18.6■□□□□ 0.57
CNOT3-208ENST00000613073 GNAQP50148 359 aa18.6■□□□□ 0.57
CNOT3-208ENST00000613073 GNG11P61952 73 aa18.6■□□□□ 0.57
CNOT3-208ENST00000613073 HSP90AA4PQ58FG1 418 aa18.6■□□□□ 0.57
CNOT3-208ENST00000613073 CLEC10AQ8IUN9 316 aa18.6■□□□□ 0.57
CNOT3-208ENST00000613073 WDR24Q96S15 920 aa18.6■□□□□ 0.57
CNOT3-208ENST00000613073 FUT8Q9BYC5 575 aa18.6■□□□□ 0.57
CNOT3-208ENST00000613073 PLEKHA4Q9H4M7 779 aa18.6■□□□□ 0.57
CNOT3-208ENST00000613073 PALM3A6NDB9 673 aaPredicted RBP18.59■□□□□ 0.57
CNOT3-208ENST00000613073 ACTN2P35609 894 aa18.59■□□□□ 0.57
CNOT3-208ENST00000613073 LEKR1Q6ZMV7 388 aa18.59■□□□□ 0.57
CNOT3-208ENST00000613073 PACS2Q86VP3 889 aa18.59■□□□□ 0.57
CNOT3-208ENST00000613073 C2CD5Q86YS7 1000 aa18.59■□□□□ 0.57
CNOT3-208ENST00000613073 MAN1B1Q9UKM7 699 aa18.59■□□□□ 0.57
CNOT3-208ENST00000613073 CALML3P27482 149 aa18.59■□□□□ 0.57
CNOT3-208ENST00000613073 PPP2R3AQ06190 1150 aa18.59■□□□□ 0.57
CNOT3-208ENST00000613073 FLAD1Q8NFF5 587 aa18.59■□□□□ 0.57
CNOT3-208ENST00000613073 SECISBP2LQ93073 1101 aaKnown RBP18.59■□□□□ 0.57
CNOT3-208ENST00000613073 PCDHA4Q9UN74 947 aa18.59■□□□□ 0.57
CNOT3-208ENST00000613073 HMGB2P26583 209 aaKnown RBP18.59■□□□□ 0.57
CNOT3-208ENST00000613073 GPATCH11Q8N954 259 aa18.59■□□□□ 0.57
CNOT3-208ENST00000613073 HSD3B7Q9H2F3 369 aa18.59■□□□□ 0.57
CNOT3-208ENST00000613073 PDE11AQ9HCR9 933 aa18.59■□□□□ 0.57
CNOT3-208ENST00000613073 PARP1P09874 1014 aaKnown RBP18.58■□□□□ 0.56
CNOT3-208ENST00000613073 RXRBP28702 533 aa18.58■□□□□ 0.56
CNOT3-208ENST00000613073 CHRNA5P30532 468 aa18.58■□□□□ 0.56
CNOT3-208ENST00000613073 NT5C2P49902 561 aa18.58■□□□□ 0.56
CNOT3-208ENST00000613073 ATP2C1P98194 919 aaPredicted RBP18.58■□□□□ 0.56
CNOT3-208ENST00000613073 GOLGA6L1Q8N7Z2 621 aa18.58■□□□□ 0.56
CNOT3-208ENST00000613073 STAMQ92783 540 aa18.58■□□□□ 0.56
CNOT3-208ENST00000613073 DPF2Q92785 391 aa18.58■□□□□ 0.56
CNOT3-208ENST00000613073 EXOC4Q96A65 974 aa18.58■□□□□ 0.56
CNOT3-208ENST00000613073 FERMT2Q96AC1 680 aa18.58■□□□□ 0.56
CNOT3-208ENST00000613073 UBA5Q9GZZ9 404 aa18.58■□□□□ 0.56
CNOT3-208ENST00000613073 PCDHAC2Q9Y5I4 1007 aa18.58■□□□□ 0.56
CNOT3-208ENST00000613073 LONRF2Q1L5Z9 754 aa18.58■□□□□ 0.56
CNOT3-208ENST00000613073 COL11A2P13942 1736 aaPredicted RBP18.57■□□□□ 0.56
CNOT3-208ENST00000613073 USP17L5A8MUK1 530 aa18.57■□□□□ 0.56
CNOT3-208ENST00000613073 N4BP1O75113 896 aaKnown RBP18.57■□□□□ 0.56
CNOT3-208ENST00000613073 PHACTR2O75167 634 aa18.57■□□□□ 0.56
CNOT3-208ENST00000613073 BMP15O95972 392 aa18.57■□□□□ 0.56
CNOT3-208ENST00000613073 CDC25AP30304 524 aa18.57■□□□□ 0.56
CNOT3-208ENST00000613073 FANCCQ00597 558 aa18.57■□□□□ 0.56
CNOT3-208ENST00000613073 MYL5Q02045 173 aa18.57■□□□□ 0.56
CNOT3-208ENST00000613073 IL17AQ16552 155 aa18.57■□□□□ 0.56
CNOT3-208ENST00000613073 TTC31Q49AM3 519 aaPredicted RBP18.57■□□□□ 0.56
CNOT3-208ENST00000613073 KIAA0825Q8IV33 1275 aa18.57■□□□□ 0.56
CNOT3-208ENST00000613073 LRRC47Q8N1G4 583 aaKnown RBP18.57■□□□□ 0.56
CNOT3-208ENST00000613073 SRRTQ9BXP5 876 aaKnown RBP18.57■□□□□ 0.56
CNOT3-208ENST00000613073 FRMPD2Q68DX3 1309 aaPredicted RBP18.57■□□□□ 0.56
CNOT3-208ENST00000613073 IKBKBO14920 756 aa18.57■□□□□ 0.56
CNOT3-208ENST00000613073 AKR1B1P15121 316 aa18.57■□□□□ 0.56
CNOT3-208ENST00000613073 CACNB3P54284 484 aa18.57■□□□□ 0.56
CNOT3-208ENST00000613073 FANCLQ9NW38 375 aa18.57■□□□□ 0.56
CNOT3-208ENST00000613073 BARHL2Q9NY43 387 aa18.57■□□□□ 0.56
CNOT3-208ENST00000613073 JRKLQ9Y4A0 524 aa18.57■□□□□ 0.56
CNOT3-208ENST00000613073 CCDC194A0A1B0GVG4 234 aa18.56■□□□□ 0.56
CNOT3-208ENST00000613073 STXBP3O00186 592 aa18.56■□□□□ 0.56
CNOT3-208ENST00000613073 ATP8B1O43520 1251 aa18.56■□□□□ 0.56
CNOT3-208ENST00000613073 TOP1P11387 765 aaKnown RBP18.56■□□□□ 0.56
CNOT3-208ENST00000613073 NFIAQ12857 509 aa18.56■□□□□ 0.56
CNOT3-208ENST00000613073 CDC42EP5Q6NZY7 148 aa18.56■□□□□ 0.56
CNOT3-208ENST00000613073 GPR161Q8N6U8 529 aaKnown RBP18.56■□□□□ 0.56
CNOT3-208ENST00000613073 SUGCTQ9HAC7 445 aa18.56■□□□□ 0.56
CNOT3-208ENST00000613073 SH3GLB2Q9NR46 395 aa18.56■□□□□ 0.56
CNOT3-208ENST00000613073 PCDHA6Q9UN73 950 aa18.56■□□□□ 0.56
CNOT3-208ENST00000613073 PCDHA8Q9Y5H6 950 aa18.56■□□□□ 0.56
CNOT3-208ENST00000613073 TPM1P09493 284 aa18.56■□□□□ 0.56
CNOT3-208ENST00000613073 E2F4Q16254 413 aa18.56■□□□□ 0.56
CNOT3-208ENST00000613073 INF2Q27J81 1249 aa18.56■□□□□ 0.56
CNOT3-208ENST00000613073 CFAP100Q494V2 611 aa18.56■□□□□ 0.56
CNOT3-208ENST00000613073 TEX2Q8IWB9 1127 aa18.56■□□□□ 0.56
CNOT3-208ENST00000613073 H0YIN7 160 aa18.55■□□□□ 0.56
CNOT3-208ENST00000613073 TRMT44Q8IYL2 757 aaKnown RBP18.55■□□□□ 0.56
CNOT3-208ENST00000613073 TEKT1Q969V4 418 aa18.55■□□□□ 0.56
CNOT3-208ENST00000613073 SUGT1Q9Y2Z0 365 aa18.55■□□□□ 0.56
CNOT3-208ENST00000613073 NRXN2Q9P2S2 1712 aa18.55■□□□□ 0.56
CNOT3-208ENST00000613073 ADAMTSL1Q8N6G6 1762 aa18.55■□□□□ 0.56
CNOT3-208ENST00000613073 SERPINC1P01008 464 aa18.55■□□□□ 0.56
CNOT3-208ENST00000613073 TRAPPC10P48553 1259 aa18.55■□□□□ 0.56
CNOT3-208ENST00000613073 SARSP49591 514 aaKnown RBP18.55■□□□□ 0.56
CNOT3-208ENST00000613073 NAPAP54920 295 aa18.55■□□□□ 0.56
CNOT3-208ENST00000613073 APOBEC3HQ6NTF7 200 aaKnown RBP18.55■□□□□ 0.56
CNOT3-208ENST00000613073 KANK3Q6NY19 840 aa18.55■□□□□ 0.56
CNOT3-208ENST00000613073 ELOA2Q8IYF1 753 aaPredicted RBP18.55■□□□□ 0.56
CNOT3-208ENST00000613073 TMEM232C9JQI7 657 aa18.54■□□□□ 0.56
CNOT3-208ENST00000613073 RBM5P52756 815 aaKnown RBP eCLIP18.54■□□□□ 0.56
CNOT3-208ENST00000613073 GABPAQ06546 454 aa18.54■□□□□ 0.56
CNOT3-208ENST00000613073 FMR1Q06787 632 aaKnown RBP eCLIP18.54■□□□□ 0.56
CNOT3-208ENST00000613073 TCP10Q12799 353 aa18.54■□□□□ 0.56
CNOT3-208ENST00000613073 ZFPM1Q8IX07 1006 aa18.54■□□□□ 0.56
CNOT3-208ENST00000613073 PAGE5Q96GU1 130 aa18.54■□□□□ 0.56
CNOT3-208ENST00000613073 PIGSQ96S52 555 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms