RNA–Protein interactions for RNA: ENST00000612509.4

SEMA3B-211, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-211ENST00000612509 SART3Q15020 963 aaKnown RBP21.16■□□□□ 0.98
SEMA3B-211ENST00000612509 ASPRV1Q53RT3 343 aa21.16■□□□□ 0.98
SEMA3B-211ENST00000612509 MFSD14CQ5VZR4 134 aa21.16■□□□□ 0.98
SEMA3B-211ENST00000612509 OLFML2BQ68BL8 750 aa21.16■□□□□ 0.98
SEMA3B-211ENST00000612509 CHST3Q7LGC8 479 aa21.16■□□□□ 0.98
SEMA3B-211ENST00000612509 CHST13Q8NET6 341 aa21.16■□□□□ 0.98
SEMA3B-211ENST00000612509 U2AF1L4Q8WU68 220 aaKnown RBP21.16■□□□□ 0.98
SEMA3B-211ENST00000612509 AGBL1Q96MI9 1066 aa21.16■□□□□ 0.98
SEMA3B-211ENST00000612509 HMX1Q9NP08 348 aaPredicted RBP21.16■□□□□ 0.98
SEMA3B-211ENST00000612509 HOMER2Q9NSB8 354 aa21.16■□□□□ 0.98
SEMA3B-211ENST00000612509 FBXO40Q9UH90 709 aa21.16■□□□□ 0.98
SEMA3B-211ENST00000612509 ERICH2A1L162 156 aa21.15■□□□□ 0.98
SEMA3B-211ENST00000612509 IGHA2P01877 340 aa21.15■□□□□ 0.98
SEMA3B-211ENST00000612509 RNF20Q5VTR2 975 aa21.15■□□□□ 0.98
SEMA3B-211ENST00000612509 MAML3Q96JK9 1138 aa21.15■□□□□ 0.98
SEMA3B-211ENST00000612509 DEFB118Q96PH6 123 aa21.15■□□□□ 0.98
SEMA3B-211ENST00000612509 ACAD9Q9H845 621 aa21.15■□□□□ 0.98
SEMA3B-211ENST00000612509 RNF146Q9NTX7 359 aa21.15■□□□□ 0.98
SEMA3B-211ENST00000612509 ICAM1P05362 532 aa21.14■□□□□ 0.97
SEMA3B-211ENST00000612509 PARP1P09874 1014 aaKnown RBP21.14■□□□□ 0.97
SEMA3B-211ENST00000612509 TAL1P17542 331 aaPredicted RBP21.14■□□□□ 0.97
SEMA3B-211ENST00000612509 WTAPQ15007 396 aa21.14■□□□□ 0.97
SEMA3B-211ENST00000612509 TKFCQ3LXA3 575 aa21.14■□□□□ 0.97
SEMA3B-211ENST00000612509 SENP2Q9HC62 589 aa21.14■□□□□ 0.97
SEMA3B-211ENST00000612509 CCPG1Q9ULG6 757 aa21.14■□□□□ 0.97
SEMA3B-211ENST00000612509 SGPL1O95470 568 aa21.13■□□□□ 0.97
SEMA3B-211ENST00000612509 ALAS1P13196 640 aa21.13■□□□□ 0.97
SEMA3B-211ENST00000612509 CCND3P30281 292 aaPredicted RBP21.13■□□□□ 0.97
SEMA3B-211ENST00000612509 CYP2C19P33261 490 aa21.13■□□□□ 0.97
SEMA3B-211ENST00000612509 ZNF792Q3KQV3 632 aa21.13■□□□□ 0.97
SEMA3B-211ENST00000612509 TMEM67Q5HYA8 995 aa21.13■□□□□ 0.97
SEMA3B-211ENST00000612509 CPVLQ9H3G5 476 aa21.13■□□□□ 0.97
SEMA3B-211ENST00000612509 DIS3Q9Y2L1 958 aaKnown RBP21.13■□□□□ 0.97
SEMA3B-211ENST00000612509 SMCHD1A6NHR9 2005 aa21.12■□□□□ 0.97
SEMA3B-211ENST00000612509 DNAJC25-GNG10A0A024R161 153 aa21.12■□□□□ 0.97
SEMA3B-211ENST00000612509 PRC1O43663 620 aa21.12■□□□□ 0.97
SEMA3B-211ENST00000612509 MCM5P33992 734 aa21.12■□□□□ 0.97
SEMA3B-211ENST00000612509 COL9A3Q14050 684 aaPredicted RBP21.12■□□□□ 0.97
SEMA3B-211ENST00000612509 ANKRD35Q8N283 1001 aa21.12■□□□□ 0.97
SEMA3B-211ENST00000612509 TRERF1Q96PN7 1200 aa21.12■□□□□ 0.97
SEMA3B-211ENST00000612509 MTA3Q9BTC8 594 aa21.12■□□□□ 0.97
SEMA3B-211ENST00000612509 UBA5Q9GZZ9 404 aa21.12■□□□□ 0.97
SEMA3B-211ENST00000612509 LCTP09848 1927 aa21.12■□□□□ 0.97
SEMA3B-211ENST00000612509 WDR19Q8NEZ3 1342 aa21.11■□□□□ 0.97
SEMA3B-211ENST00000612509 CYBAP13498 195 aa21.11■□□□□ 0.97
SEMA3B-211ENST00000612509 IGDCC4Q8TDY8 1250 aa21.11■□□□□ 0.97
SEMA3B-211ENST00000612509 DDX11Q96FC9 970 aa21.11■□□□□ 0.97
SEMA3B-211ENST00000612509 CRISPLD2Q9H0B8 497 aa21.11■□□□□ 0.97
SEMA3B-211ENST00000612509 LY9Q9HBG7 655 aa21.11■□□□□ 0.97
SEMA3B-211ENST00000612509 A1CFQ9NQ94 594 aaKnown RBP21.11■□□□□ 0.97
SEMA3B-211ENST00000612509 MYH6P13533 1939 aa21.11■□□□□ 0.97
SEMA3B-211ENST00000612509 SH2B2O14492 632 aaPredicted RBP21.1■□□□□ 0.97
SEMA3B-211ENST00000612509 REC8O95072 547 aa21.1■□□□□ 0.97
SEMA3B-211ENST00000612509 GRM4Q14833 912 aa21.1■□□□□ 0.97
SEMA3B-211ENST00000612509 CDC37Q16543 378 aaPredicted RBP21.1■□□□□ 0.97
SEMA3B-211ENST00000612509 MUM1L1Q5H9M0 696 aa21.1■□□□□ 0.97
SEMA3B-211ENST00000612509 RASEFQ8IZ41 740 aa21.1■□□□□ 0.97
SEMA3B-211ENST00000612509 TRPV1Q8NER1 839 aa21.1■□□□□ 0.97
SEMA3B-211ENST00000612509 PNMA2Q9UL42 364 aa21.1■□□□□ 0.97
SEMA3B-211ENST00000612509 PFASO15067 1338 aa21.09■□□□□ 0.97
SEMA3B-211ENST00000612509 ADGRF4Q8IZF3 695 aa21.09■□□□□ 0.97
SEMA3B-211ENST00000612509 STAG2Q8N3U4 1231 aa21.09■□□□□ 0.97
SEMA3B-211ENST00000612509 TMEM87BQ96K49 555 aa21.09■□□□□ 0.97
SEMA3B-211ENST00000612509 FGD4Q96M96 766 aa21.09■□□□□ 0.97
SEMA3B-211ENST00000612509 TINF2Q9BSI4 451 aa21.09■□□□□ 0.97
SEMA3B-211ENST00000612509 GPHNQ9NQX3 736 aaPredicted RBP21.09■□□□□ 0.97
SEMA3B-211ENST00000612509 MAD2L2Q9UI95 211 aa21.09■□□□□ 0.97
SEMA3B-211ENST00000612509 LRRC37A2A6NM11 1700 aa21.09■□□□□ 0.97
SEMA3B-211ENST00000612509 DHX16O60231 1041 aaKnown RBP21.08■□□□□ 0.97
SEMA3B-211ENST00000612509 FARP2O94887 1054 aaPredicted RBP21.08■□□□□ 0.97
SEMA3B-211ENST00000612509 TFRCP02786 760 aaKnown RBP21.08■□□□□ 0.97
SEMA3B-211ENST00000612509 CAPN2P17655 700 aa21.08■□□□□ 0.97
SEMA3B-211ENST00000612509 TROAPQ12815 778 aa21.08■□□□□ 0.97
SEMA3B-211ENST00000612509 TSGA10IPQ3SY00 556 aa21.08■□□□□ 0.97
SEMA3B-211ENST00000612509 CATIPQ7Z7H3 387 aa21.08■□□□□ 0.97
SEMA3B-211ENST00000612509 NEK1Q96PY6 1258 aa21.08■□□□□ 0.97
SEMA3B-211ENST00000612509 MCM3APO60318 1980 aa21.08■□□□□ 0.96
SEMA3B-211ENST00000612509 TNRC18O15417 2968 aaPredicted RBP21.08■□□□□ 0.96
SEMA3B-211ENST00000612509 PALM3A6NDB9 673 aaPredicted RBP21.07■□□□□ 0.96
SEMA3B-211ENST00000612509 DDAH1O94760 285 aa21.07■□□□□ 0.96
SEMA3B-211ENST00000612509 HSPA4P34932 840 aa21.07■□□□□ 0.96
SEMA3B-211ENST00000612509 KRT32Q14532 448 aa21.07■□□□□ 0.96
SEMA3B-211ENST00000612509 ADCK5Q3MIX3 580 aa21.07■□□□□ 0.96
SEMA3B-211ENST00000612509 UBE2Q1Q7Z7E8 422 aa21.07■□□□□ 0.96
SEMA3B-211ENST00000612509 ZNF467Q7Z7K2 595 aaPredicted RBP21.07■□□□□ 0.96
SEMA3B-211ENST00000612509 ZNF654Q8IZM8 581 aa21.07■□□□□ 0.96
SEMA3B-211ENST00000612509 MSL3Q8N5Y2 521 aaKnown RBP21.07■□□□□ 0.96
SEMA3B-211ENST00000612509 FAM133AQ8N9E0 248 aa21.07■□□□□ 0.96
SEMA3B-211ENST00000612509 LRRC2Q9BYS8 371 aa21.07■□□□□ 0.96
SEMA3B-211ENST00000612509 DDX20Q9UHI6 824 aaKnown RBP21.07■□□□□ 0.96
SEMA3B-211ENST00000612509 NRBP1Q9UHY1 535 aa21.07■□□□□ 0.96
SEMA3B-211ENST00000612509 OGDHLQ9ULD0 1010 aa21.07■□□□□ 0.96
SEMA3B-211ENST00000612509 MKI67P46013 3256 aaKnown RBP21.07■□□□□ 0.96
SEMA3B-211ENST00000612509 SYNGAP1Q96PV0 1343 aa21.06■□□□□ 0.96
SEMA3B-211ENST00000612509 KLRF2D3W0D1 207 aa21.06■□□□□ 0.96
SEMA3B-211ENST00000612509 POTEB2H3BUK9 544 aa21.06■□□□□ 0.96
SEMA3B-211ENST00000612509 NFIBO00712 420 aa21.06■□□□□ 0.96
SEMA3B-211ENST00000612509 CNGA1P29973 690 aa21.06■□□□□ 0.96
SEMA3B-211ENST00000612509 QRICH1Q2TAL8 776 aa21.06■□□□□ 0.96
SEMA3B-211ENST00000612509 LHX8Q68G74 356 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms