RNA–Protein interactions for RNA: ENST00000611969.4

LINC00116-203, Transcript of Uncharacterized protein encoded by LINC00116, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LINC00116, Length 441 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116-203ENST00000611969 BEX3Q00994 111 aa16.55■□□□□ 0.24
LINC00116-203ENST00000611969 ACVR2BQ13705 512 aa16.55■□□□□ 0.24
LINC00116-203ENST00000611969 CEP85Q6P2H3 762 aa16.55■□□□□ 0.24
LINC00116-203ENST00000611969 LRFN3Q9BTN0 628 aa16.55■□□□□ 0.24
LINC00116-203ENST00000611969 TEX13BQ9BXU2 312 aa16.55■□□□□ 0.24
LINC00116-203ENST00000611969 WNT8AQ9H1J5 351 aa16.55■□□□□ 0.24
LINC00116-203ENST00000611969 HIPK3Q9H422 1215 aa16.55■□□□□ 0.24
LINC00116-203ENST00000611969 RCAN3Q9UKA8 241 aa16.55■□□□□ 0.24
LINC00116-203ENST00000611969 HMMRO75330 724 aa16.54■□□□□ 0.24
LINC00116-203ENST00000611969 FGBP02675 491 aa16.54■□□□□ 0.24
LINC00116-203ENST00000611969 CCL23P55773 120 aa16.54■□□□□ 0.24
LINC00116-203ENST00000611969 GNASQ5JWF2 1037 aa16.54■□□□□ 0.24
LINC00116-203ENST00000611969 VWCEQ96DN2 955 aa16.54■□□□□ 0.24
LINC00116-203ENST00000611969 DDX11Q96FC9 970 aa16.54■□□□□ 0.24
LINC00116-203ENST00000611969 KATNBL1Q9H079 304 aa16.54■□□□□ 0.24
LINC00116-203ENST00000611969 TSPYL2Q9H2G4 693 aaPredicted RBP16.54■□□□□ 0.24
LINC00116-203ENST00000611969 GOPCQ9HD26 462 aa16.54■□□□□ 0.24
LINC00116-203ENST00000611969 EXOC6BQ9Y2D4 811 aa16.54■□□□□ 0.24
LINC00116-203ENST00000611969 ASTN1O14525 1302 aa16.53■□□□□ 0.24
LINC00116-203ENST00000611969 RFXAPO00287 272 aa16.53■□□□□ 0.24
LINC00116-203ENST00000611969 GOLIM4O00461 696 aa16.53■□□□□ 0.24
LINC00116-203ENST00000611969 MBD4O95243 580 aa16.53■□□□□ 0.24
LINC00116-203ENST00000611969 SLC4A3P48751 1232 aa16.53■□□□□ 0.24
LINC00116-203ENST00000611969 TTF1Q15361 905 aaPredicted RBP16.53■□□□□ 0.24
LINC00116-203ENST00000611969 SKIV2LQ15477 1246 aaKnown RBP16.53■□□□□ 0.24
LINC00116-203ENST00000611969 C12orf60Q5U649 245 aa16.53■□□□□ 0.24
LINC00116-203ENST00000611969 CXCL17Q6UXB2 119 aa16.53■□□□□ 0.24
LINC00116-203ENST00000611969 C16orf86Q6ZW13 317 aa16.53■□□□□ 0.24
LINC00116-203ENST00000611969 ARMCX2Q7L311 632 aa16.53■□□□□ 0.24
LINC00116-203ENST00000611969 ZNF467Q7Z7K2 595 aaPredicted RBP16.53■□□□□ 0.24
LINC00116-203ENST00000611969 CCDC17Q96LX7 622 aa16.53■□□□□ 0.24
LINC00116-203ENST00000611969 DNAJC2Q99543 621 aaKnown RBP16.53■□□□□ 0.24
LINC00116-203ENST00000611969 SLF1Q9BQI6 1058 aa16.53■□□□□ 0.24
LINC00116-203ENST00000611969 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.53■□□□□ 0.24
LINC00116-203ENST00000611969 MTIF3Q9H2K0 278 aaKnown RBP16.53■□□□□ 0.24
LINC00116-203ENST00000611969 HCN4Q9Y3Q4 1203 aa16.53■□□□□ 0.24
LINC00116-203ENST00000611969 GRIN2DO15399 1336 aa16.52■□□□□ 0.24
LINC00116-203ENST00000611969 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.52■□□□□ 0.24
LINC00116-203ENST00000611969 EPOPA6NHQ4 379 aa16.52■□□□□ 0.24
LINC00116-203ENST00000611969 CHGBP05060 677 aa16.52■□□□□ 0.24
LINC00116-203ENST00000611969 KRT40Q6A162 431 aa16.52■□□□□ 0.24
LINC00116-203ENST00000611969 SLC43A3Q8NBI5 491 aa16.52■□□□□ 0.24
LINC00116-203ENST00000611969 KHSRPQ92945 711 aaKnown RBP eCLIP16.52■□□□□ 0.24
LINC00116-203ENST00000611969 NOC4LQ9BVI4 516 aaKnown RBP16.52■□□□□ 0.24
LINC00116-203ENST00000611969 ABHD16BQ9H3Z7 469 aa16.52■□□□□ 0.24
LINC00116-203ENST00000611969 KANSL2Q9H9L4 492 aa16.52■□□□□ 0.24
LINC00116-203ENST00000611969 SPC25Q9HBM1 224 aa16.52■□□□□ 0.24
LINC00116-203ENST00000611969 IL1RAPL2Q9NP60 686 aa16.52■□□□□ 0.24
LINC00116-203ENST00000611969 C11orf16Q9NQ32 467 aa16.52■□□□□ 0.24
LINC00116-203ENST00000611969 ZBTB40Q9NUA8 1239 aa16.52■□□□□ 0.24
LINC00116-203ENST00000611969 ERC2O15083 957 aa16.51■□□□□ 0.23
LINC00116-203ENST00000611969 CPXCR1Q8N123 301 aa16.51■□□□□ 0.23
LINC00116-203ENST00000611969 TRPV6Q9H1D0 765 aa16.51■□□□□ 0.23
LINC00116-203ENST00000611969 CERS4Q9HA82 394 aa16.51■□□□□ 0.23
LINC00116-203ENST00000611969 PCDHA11Q9Y5I1 949 aa16.51■□□□□ 0.23
LINC00116-203ENST00000611969 MTCH2Q9Y6C9 303 aa16.51■□□□□ 0.23
LINC00116-203ENST00000611969 SLC4A7Q9Y6M7 1214 aa16.51■□□□□ 0.23
LINC00116-203ENST00000611969 FAM86C2PA6NEL3 165 aa16.5■□□□□ 0.23
LINC00116-203ENST00000611969 USP17L12C9JPN9 530 aa16.5■□□□□ 0.23
LINC00116-203ENST00000611969 USP17L21D6R901 530 aa16.5■□□□□ 0.23
LINC00116-203ENST00000611969 B4GALT4O60513 344 aa16.5■□□□□ 0.23
LINC00116-203ENST00000611969 NKX3-2P78367 333 aa16.5■□□□□ 0.23
LINC00116-203ENST00000611969 AAK1Q2M2I8 961 aa16.5■□□□□ 0.23
LINC00116-203ENST00000611969 CCDC144CPQ8IYA2 1237 aa16.5■□□□□ 0.23
LINC00116-203ENST00000611969 SCLYQ96I15 445 aa16.5■□□□□ 0.23
LINC00116-203ENST00000611969 RAVER2Q9HCJ3 691 aaKnown RBP16.5■□□□□ 0.23
LINC00116-203ENST00000611969 ATP8A2Q9NTI2 1148 aa16.5■□□□□ 0.23
LINC00116-203ENST00000611969 DDX49Q9Y6V7 483 aaKnown RBP16.5■□□□□ 0.23
LINC00116-203ENST00000611969 MUC6Q6W4X9 2439 aa16.49■□□□□ 0.23
LINC00116-203ENST00000611969 ZBBXA8MT70 800 aa16.49■□□□□ 0.23
LINC00116-203ENST00000611969 RAB11FIP3O75154 756 aa16.49■□□□□ 0.23
LINC00116-203ENST00000611969 ARHGEF15O94989 841 aa16.49■□□□□ 0.23
LINC00116-203ENST00000611969 NDUFB10O96000 172 aa16.49■□□□□ 0.23
LINC00116-203ENST00000611969 CA3P07451 260 aa16.49■□□□□ 0.23
LINC00116-203ENST00000611969 ATP2A2P16615 1042 aaKnown RBP16.49■□□□□ 0.23
LINC00116-203ENST00000611969 PSMC6P62333 389 aa16.49■□□□□ 0.23
LINC00116-203ENST00000611969 ITGA7Q13683 1181 aa16.49■□□□□ 0.23
LINC00116-203ENST00000611969 TTLL4Q14679 1199 aa16.49■□□□□ 0.23
LINC00116-203ENST00000611969 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.49■□□□□ 0.23
LINC00116-203ENST00000611969 CLASRPQ8N2M8 674 aaKnown RBP16.49■□□□□ 0.23
LINC00116-203ENST00000611969 KIF1BPQ96EK5 621 aa16.49■□□□□ 0.23
LINC00116-203ENST00000611969 COG6Q9Y2V7 657 aa16.49■□□□□ 0.23
LINC00116-203ENST00000611969 ARIH1Q9Y4X5 557 aaPredicted RBP16.49■□□□□ 0.23
LINC00116-203ENST00000611969 BRWD1Q9NSI6 2320 aa16.48■□□□□ 0.23
LINC00116-203ENST00000611969 ATP2A1O14983 1001 aa16.48■□□□□ 0.23
LINC00116-203ENST00000611969 ADD2P35612 726 aa16.48■□□□□ 0.23
LINC00116-203ENST00000611969 CNTN2Q02246 1040 aa16.48■□□□□ 0.23
LINC00116-203ENST00000611969 TMEM31Q5JXX7 168 aa16.48■□□□□ 0.23
LINC00116-203ENST00000611969 TLK2Q86UE8 772 aa16.48■□□□□ 0.23
LINC00116-203ENST00000611969 ANKRD35Q8N283 1001 aa16.48■□□□□ 0.23
LINC00116-203ENST00000611969 RHPN1Q8TCX5 695 aa16.48■□□□□ 0.23
LINC00116-203ENST00000611969 GNEQ9Y223 722 aaKnown RBP16.48■□□□□ 0.23
LINC00116-203ENST00000611969 TLL1O43897 1013 aa16.47■□□□□ 0.23
LINC00116-203ENST00000611969 TNFAIP2Q03169 654 aa16.47■□□□□ 0.23
LINC00116-203ENST00000611969 FSCN1Q16658 493 aaKnown RBP16.47■□□□□ 0.23
LINC00116-203ENST00000611969 TMEM63BQ5T3F8 832 aa16.47■□□□□ 0.23
LINC00116-203ENST00000611969 CTR9Q6PD62 1173 aa16.47■□□□□ 0.23
LINC00116-203ENST00000611969 NOL8Q76FK4 1167 aaKnown RBP16.47■□□□□ 0.23
LINC00116-203ENST00000611969 KIFC2Q96AC6 838 aa16.47■□□□□ 0.23
LINC00116-203ENST00000611969 AGBL1Q96MI9 1066 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms