RNA–Protein interactions for RNA: ENST00000598108.5

IRF3-220, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-220ENST00000598108 MB21D2Q8IYB1 491 aaPredicted RBP26.73■■□□□ 1.87
IRF3-220ENST00000598108 CPVLQ9H3G5 476 aa26.73■■□□□ 1.87
IRF3-220ENST00000598108 HOMER2Q9NSB8 354 aa26.73■■□□□ 1.87
IRF3-220ENST00000598108 COL11A1P12107 1806 aaPredicted RBP26.72■■□□□ 1.87
IRF3-220ENST00000598108 IFIT3O14879 490 aaKnown RBP26.72■■□□□ 1.87
IRF3-220ENST00000598108 CCND3P30281 292 aaPredicted RBP26.72■■□□□ 1.87
IRF3-220ENST00000598108 ZNF792Q3KQV3 632 aa26.72■■□□□ 1.87
IRF3-220ENST00000598108 MFSD14CQ5VZR4 134 aa26.72■■□□□ 1.87
IRF3-220ENST00000598108 OLFML2BQ68BL8 750 aa26.72■■□□□ 1.87
IRF3-220ENST00000598108 UBA5Q9GZZ9 404 aa26.72■■□□□ 1.87
IRF3-220ENST00000598108 RANBP17Q9H2T7 1088 aaKnown RBP26.72■■□□□ 1.87
IRF3-220ENST00000598108 TRPV1Q8NER1 839 aa26.71■■□□□ 1.87
IRF3-220ENST00000598108 CHST13Q8NET6 341 aa26.71■■□□□ 1.87
IRF3-220ENST00000598108 MAML3Q96JK9 1138 aa26.71■■□□□ 1.87
IRF3-220ENST00000598108 SLC5A4Q9NY91 659 aa26.71■■□□□ 1.87
IRF3-220ENST00000598108 TFRCP02786 760 aaKnown RBP26.7■■□□□ 1.86
IRF3-220ENST00000598108 GPATCH4Q5T3I0 446 aaKnown RBP26.7■■□□□ 1.86
IRF3-220ENST00000598108 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.7■■□□□ 1.86
IRF3-220ENST00000598108 IGDCC4Q8TDY8 1250 aa26.7■■□□□ 1.86
IRF3-220ENST00000598108 CRISPLD2Q9H0B8 497 aa26.7■■□□□ 1.86
IRF3-220ENST00000598108 GPHNQ9NQX3 736 aaPredicted RBP26.7■■□□□ 1.86
IRF3-220ENST00000598108 DNAJC25-GNG10A0A024R161 153 aa26.69■■□□□ 1.86
IRF3-220ENST00000598108 ALAS1P13196 640 aa26.69■■□□□ 1.86
IRF3-220ENST00000598108 DDX11Q96FC9 970 aa26.69■■□□□ 1.86
IRF3-220ENST00000598108 TRERF1Q96PN7 1200 aa26.69■■□□□ 1.86
IRF3-220ENST00000598108 RNF146Q9NTX7 359 aa26.69■■□□□ 1.86
IRF3-220ENST00000598108 FBXO40Q9UH90 709 aa26.69■■□□□ 1.86
IRF3-220ENST00000598108 ICAM1P05362 532 aa26.68■■□□□ 1.86
IRF3-220ENST00000598108 MUM1L1Q5H9M0 696 aa26.68■■□□□ 1.86
IRF3-220ENST00000598108 PRAMEF19Q5SWL8 479 aa26.68■■□□□ 1.86
IRF3-220ENST00000598108 CCPG1Q9ULG6 757 aa26.68■■□□□ 1.86
IRF3-220ENST00000598108 DIS3Q9Y2L1 958 aaKnown RBP26.68■■□□□ 1.86
IRF3-220ENST00000598108 PARP1P09874 1014 aaKnown RBP26.67■■□□□ 1.86
IRF3-220ENST00000598108 TKFCQ3LXA3 575 aa26.67■■□□□ 1.86
IRF3-220ENST00000598108 ASPRV1Q53RT3 343 aa26.67■■□□□ 1.86
IRF3-220ENST00000598108 TMEM67Q5HYA8 995 aa26.67■■□□□ 1.86
IRF3-220ENST00000598108 UBE2Q1Q7Z7E8 422 aa26.67■■□□□ 1.86
IRF3-220ENST00000598108 RASEFQ8IZ41 740 aa26.67■■□□□ 1.86
IRF3-220ENST00000598108 ANKRD35Q8N283 1001 aa26.67■■□□□ 1.86
IRF3-220ENST00000598108 STAG2Q8N3U4 1231 aa26.67■■□□□ 1.86
IRF3-220ENST00000598108 ACAD9Q9H845 621 aa26.67■■□□□ 1.86
IRF3-220ENST00000598108 RBBP6Q7Z6E9 1792 aaKnown RBP26.66■■□□□ 1.86
IRF3-220ENST00000598108 WTAPQ15007 396 aa26.66■■□□□ 1.86
IRF3-220ENST00000598108 LHX8Q68G74 356 aa26.66■■□□□ 1.86
IRF3-220ENST00000598108 A1CFQ9NQ94 594 aaKnown RBP26.66■■□□□ 1.86
IRF3-220ENST00000598108 ZNF236Q9UL36 1845 aa26.66■■□□□ 1.86
IRF3-220ENST00000598108 TNRC18O15417 2968 aaPredicted RBP26.65■■□□□ 1.86
IRF3-220ENST00000598108 ERICH2A1L162 156 aa26.65■■□□□ 1.86
IRF3-220ENST00000598108 PRC1O43663 620 aa26.65■■□□□ 1.86
IRF3-220ENST00000598108 CYBAP13498 195 aa26.65■■□□□ 1.86
IRF3-220ENST00000598108 SART3Q15020 963 aaKnown RBP26.65■■□□□ 1.86
IRF3-220ENST00000598108 ADGRF4Q8IZF3 695 aa26.65■■□□□ 1.86
IRF3-220ENST00000598108 FGD4Q96M96 766 aa26.65■■□□□ 1.86
IRF3-220ENST00000598108 MCM5P33992 734 aa26.64■■□□□ 1.86
IRF3-220ENST00000598108 RNF20Q5VTR2 975 aa26.64■■□□□ 1.86
IRF3-220ENST00000598108 TINF2Q9BSI4 451 aa26.64■■□□□ 1.86
IRF3-220ENST00000598108 LY9Q9HBG7 655 aa26.64■■□□□ 1.86
IRF3-220ENST00000598108 MAD2L2Q9UI95 211 aa26.64■■□□□ 1.86
IRF3-220ENST00000598108 CNGA1P29973 690 aa26.63■■□□□ 1.85
IRF3-220ENST00000598108 CNTN2Q02246 1040 aa26.63■■□□□ 1.85
IRF3-220ENST00000598108 TROAPQ12815 778 aa26.63■■□□□ 1.85
IRF3-220ENST00000598108 TSGA10IPQ3SY00 556 aa26.63■■□□□ 1.85
IRF3-220ENST00000598108 VAT1LQ9HCJ6 419 aa26.63■■□□□ 1.85
IRF3-220ENST00000598108 OGDHLQ9ULD0 1010 aa26.63■■□□□ 1.85
IRF3-220ENST00000598108 PALM3A6NDB9 673 aaPredicted RBP26.62■■□□□ 1.85
IRF3-220ENST00000598108 FARP2O94887 1054 aaPredicted RBP26.62■■□□□ 1.85
IRF3-220ENST00000598108 MNX1P50219 401 aaPredicted RBP26.62■■□□□ 1.85
IRF3-220ENST00000598108 SLC35G1Q2M3R5 365 aa26.62■■□□□ 1.85
IRF3-220ENST00000598108 FAM133AQ8N9E0 248 aa26.62■■□□□ 1.85
IRF3-220ENST00000598108 CLEC4DQ8WXI8 215 aa26.62■■□□□ 1.85
IRF3-220ENST00000598108 LRRC2Q9BYS8 371 aa26.62■■□□□ 1.85
IRF3-220ENST00000598108 JMJD4Q9H9V9 463 aa26.62■■□□□ 1.85
IRF3-220ENST00000598108 KLRF2D3W0D1 207 aa26.61■■□□□ 1.85
IRF3-220ENST00000598108 GRM4Q14833 912 aa26.61■■□□□ 1.85
IRF3-220ENST00000598108 ADCK5Q3MIX3 580 aa26.61■■□□□ 1.85
IRF3-220ENST00000598108 DIS3LQ8TF46 1054 aaKnown RBP26.61■■□□□ 1.85
IRF3-220ENST00000598108 CYP39A1Q9NYL5 469 aa26.61■■□□□ 1.85
IRF3-220ENST00000598108 DDX20Q9UHI6 824 aaKnown RBP26.61■■□□□ 1.85
IRF3-220ENST00000598108 POTEB2H3BUK9 544 aa26.6■■□□□ 1.85
IRF3-220ENST00000598108 NFIBO00712 420 aa26.6■■□□□ 1.85
IRF3-220ENST00000598108 SH2B2O14492 632 aaPredicted RBP26.6■■□□□ 1.85
IRF3-220ENST00000598108 SNAI1O95863 264 aaPredicted RBP26.6■■□□□ 1.85
IRF3-220ENST00000598108 CDC37Q16543 378 aaPredicted RBP26.6■■□□□ 1.85
IRF3-220ENST00000598108 MAMDC4Q6UXC1 1216 aa26.6■■□□□ 1.85
IRF3-220ENST00000598108 ZNF467Q7Z7K2 595 aaPredicted RBP26.6■■□□□ 1.85
IRF3-220ENST00000598108 KCNB2Q92953 911 aa26.6■■□□□ 1.85
IRF3-220ENST00000598108 NEK1Q96PY6 1258 aa26.6■■□□□ 1.85
IRF3-220ENST00000598108 PURBQ96QR8 312 aaKnown RBP26.6■■□□□ 1.85
IRF3-220ENST00000598108 MTA3Q9BTC8 594 aa26.6■■□□□ 1.85
IRF3-220ENST00000598108 WDR19Q8NEZ3 1342 aa26.6■■□□□ 1.85
IRF3-220ENST00000598108 SOWAHBA6NEL2 793 aa26.59■■□□□ 1.85
IRF3-220ENST00000598108 CAPN2P17655 700 aa26.59■■□□□ 1.85
IRF3-220ENST00000598108 NSMFQ6X4W1 530 aa26.59■■□□□ 1.85
IRF3-220ENST00000598108 CATIPQ7Z7H3 387 aa26.59■■□□□ 1.85
IRF3-220ENST00000598108 TMEM87BQ96K49 555 aa26.59■■□□□ 1.85
IRF3-220ENST00000598108 MYL10Q9BUA6 226 aa26.59■■□□□ 1.85
IRF3-220ENST00000598108 DHX16O60231 1041 aaKnown RBP26.58■■□□□ 1.85
IRF3-220ENST00000598108 ZNF865P0CJ78 1059 aaPredicted RBP26.58■■□□□ 1.85
IRF3-220ENST00000598108 HSPA4P34932 840 aa26.58■■□□□ 1.85
IRF3-220ENST00000598108 EXOSC10Q01780 885 aaKnown RBP26.58■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms