RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 RGS2P41220 211 aa16.1■□□□□ 0.17
SHKBP1-207ENST00000595631 TROAPQ12815 778 aa16.1■□□□□ 0.17
SHKBP1-207ENST00000595631 TRIM32Q13049 653 aa16.1■□□□□ 0.17
SHKBP1-207ENST00000595631 SLC35G1Q2M3R5 365 aa16.1■□□□□ 0.17
SHKBP1-207ENST00000595631 NFXL1Q6ZNB6 911 aa16.1■□□□□ 0.17
SHKBP1-207ENST00000595631 DHX32Q7L7V1 743 aaKnown RBP16.1■□□□□ 0.17
SHKBP1-207ENST00000595631 SLAIN1Q8ND83 568 aa16.1■□□□□ 0.17
SHKBP1-207ENST00000595631 NUP133Q8WUM0 1156 aa16.1■□□□□ 0.17
SHKBP1-207ENST00000595631 TRIB2Q92519 343 aa16.1■□□□□ 0.17
SHKBP1-207ENST00000595631 ZNF333Q96JL9 665 aa16.1■□□□□ 0.17
SHKBP1-207ENST00000595631 MMP19Q99542 508 aa16.1■□□□□ 0.17
SHKBP1-207ENST00000595631 PALM3A6NDB9 673 aaPredicted RBP16.09■□□□□ 0.17
SHKBP1-207ENST00000595631 EPB41L2O43491 1005 aaKnown RBP16.09■□□□□ 0.17
SHKBP1-207ENST00000595631 INHAP05111 366 aa16.09■□□□□ 0.17
SHKBP1-207ENST00000595631 PGK2P07205 417 aa16.09■□□□□ 0.17
SHKBP1-207ENST00000595631 FDX1P10109 184 aa16.09■□□□□ 0.17
SHKBP1-207ENST00000595631 ALAS1P13196 640 aa16.09■□□□□ 0.17
SHKBP1-207ENST00000595631 OAZ1P54368 228 aa16.09■□□□□ 0.17
SHKBP1-207ENST00000595631 SOX10P56693 466 aa16.09■□□□□ 0.17
SHKBP1-207ENST00000595631 MTFR1Q15390 333 aa16.09■□□□□ 0.17
SHKBP1-207ENST00000595631 C8orf34Q49A92 452 aa16.09■□□□□ 0.17
SHKBP1-207ENST00000595631 CATIPQ7Z7H3 387 aa16.09■□□□□ 0.17
SHKBP1-207ENST00000595631 ADGRF4Q8IZF3 695 aa16.09■□□□□ 0.17
SHKBP1-207ENST00000595631 APBA2Q99767 749 aa16.09■□□□□ 0.17
SHKBP1-207ENST00000595631 MTA3Q9BTC8 594 aa16.09■□□□□ 0.17
SHKBP1-207ENST00000595631 VAT1LQ9HCJ6 419 aa16.09■□□□□ 0.17
SHKBP1-207ENST00000595631 FLRT1Q9NZU1 646 aa16.09■□□□□ 0.17
SHKBP1-207ENST00000595631 BIN2Q9UBW5 565 aaPredicted RBP16.09■□□□□ 0.17
SHKBP1-207ENST00000595631 CCPG1Q9ULG6 757 aa16.09■□□□□ 0.17
SHKBP1-207ENST00000595631 CCDC69A6NI79 296 aa16.08■□□□□ 0.16
SHKBP1-207ENST00000595631 KLRF2D3W0D1 207 aa16.08■□□□□ 0.16
SHKBP1-207ENST00000595631 DHX16O60231 1041 aaKnown RBP16.08■□□□□ 0.16
SHKBP1-207ENST00000595631 FCER1AP12319 257 aa16.08■□□□□ 0.16
SHKBP1-207ENST00000595631 CASTP20810 708 aaKnown RBP16.08■□□□□ 0.16
SHKBP1-207ENST00000595631 CDC37Q16543 378 aaPredicted RBP16.08■□□□□ 0.16
SHKBP1-207ENST00000595631 MUM1L1Q5H9M0 696 aa16.08■□□□□ 0.16
SHKBP1-207ENST00000595631 BLOC1S2Q6QNY1 142 aa16.08■□□□□ 0.16
SHKBP1-207ENST00000595631 NBPF11Q86T75 865 aa16.08■□□□□ 0.16
SHKBP1-207ENST00000595631 CCDC144CPQ8IYA2 1237 aa16.08■□□□□ 0.16
SHKBP1-207ENST00000595631 PXYLP1Q8TE99 480 aa16.08■□□□□ 0.16
SHKBP1-207ENST00000595631 JMJD4Q9H9V9 463 aa16.08■□□□□ 0.16
SHKBP1-207ENST00000595631 RNF146Q9NTX7 359 aa16.08■□□□□ 0.16
SHKBP1-207ENST00000595631 WDR19Q8NEZ3 1342 aa16.08■□□□□ 0.16
SHKBP1-207ENST00000595631 LRRC37A2A6NM11 1700 aa16.08■□□□□ 0.16
SHKBP1-207ENST00000595631 STRNO43815 780 aa16.07■□□□□ 0.16
SHKBP1-207ENST00000595631 DDAH1O94760 285 aa16.07■□□□□ 0.16
SHKBP1-207ENST00000595631 ICAM1P05362 532 aa16.07■□□□□ 0.16
SHKBP1-207ENST00000595631 RPS6KB1P23443 525 aa16.07■□□□□ 0.16
SHKBP1-207ENST00000595631 COPB2P35606 906 aa16.07■□□□□ 0.16
SHKBP1-207ENST00000595631 LIFRP42702 1097 aa16.07■□□□□ 0.16
SHKBP1-207ENST00000595631 DPP9Q86TI2 863 aa16.07■□□□□ 0.16
SHKBP1-207ENST00000595631 TRERF1Q96PN7 1200 aa16.07■□□□□ 0.16
SHKBP1-207ENST00000595631 BRPF3Q9ULD4 1205 aa16.07■□□□□ 0.16
SHKBP1-207ENST00000595631 CENPFP49454 3210 aa16.07■□□□□ 0.16
SHKBP1-207ENST00000595631 HMGCRP04035 888 aa16.06■□□□□ 0.16
SHKBP1-207ENST00000595631 HMGB1P09429 215 aaKnown RBP16.06■□□□□ 0.16
SHKBP1-207ENST00000595631 HOXC6P09630 235 aa16.06■□□□□ 0.16
SHKBP1-207ENST00000595631 XRCC5P13010 732 aaKnown RBP16.06■□□□□ 0.16
SHKBP1-207ENST00000595631 KCTD2Q14681 263 aa16.06■□□□□ 0.16
SHKBP1-207ENST00000595631 USH1GQ495M9 461 aa16.06■□□□□ 0.16
SHKBP1-207ENST00000595631 Q6ZUG5 572 aa16.06■□□□□ 0.16
SHKBP1-207ENST00000595631 SGMS1Q86VZ5 419 aa16.06■□□□□ 0.16
SHKBP1-207ENST00000595631 MICU3Q86XE3 530 aa16.06■□□□□ 0.16
SHKBP1-207ENST00000595631 ABRAQ8N0Z2 381 aa16.06■□□□□ 0.16
SHKBP1-207ENST00000595631 CMTR1Q8N1G2 835 aaKnown RBP16.06■□□□□ 0.16
SHKBP1-207ENST00000595631 CHST13Q8NET6 341 aa16.06■□□□□ 0.16
SHKBP1-207ENST00000595631 UNC93B1Q9H1C4 597 aa16.06■□□□□ 0.16
SHKBP1-207ENST00000595631 ACAD9Q9H845 621 aa16.06■□□□□ 0.16
SHKBP1-207ENST00000595631 SLC12A7Q9Y666 1083 aa16.06■□□□□ 0.16
SHKBP1-207ENST00000595631 KIAA0100Q14667 2235 aaKnown RBP16.06■□□□□ 0.16
SHKBP1-207ENST00000595631 POTEFA5A3E0 1075 aa16.05■□□□□ 0.16
SHKBP1-207ENST00000595631 NFIBO00712 420 aa16.05■□□□□ 0.16
SHKBP1-207ENST00000595631 CYTH3O43739 400 aa16.05■□□□□ 0.16
SHKBP1-207ENST00000595631 PLEKHA8P1O95397 391 aa16.05■□□□□ 0.16
SHKBP1-207ENST00000595631 CCL5P13501 91 aa16.05■□□□□ 0.16
SHKBP1-207ENST00000595631 APOBRQ0VD83 1088 aa16.05■□□□□ 0.16
SHKBP1-207ENST00000595631 QRICH1Q2TAL8 776 aa16.05■□□□□ 0.16
SHKBP1-207ENST00000595631 APOA5Q6Q788 366 aa16.05■□□□□ 0.16
SHKBP1-207ENST00000595631 TMTC2Q8N394 836 aa16.05■□□□□ 0.16
SHKBP1-207ENST00000595631 PIBF1Q8WXW3 757 aa16.05■□□□□ 0.16
SHKBP1-207ENST00000595631 UPF3BQ9BZI7 483 aaKnown RBP16.05■□□□□ 0.16
SHKBP1-207ENST00000595631 DNAJC25-GNG10A0A024R161 153 aa16.04■□□□□ 0.16
SHKBP1-207ENST00000595631 KLF18A0A0U1RQI7 1052 aa16.04■□□□□ 0.16
SHKBP1-207ENST00000595631 PPP1R11O60927 126 aaPredicted RBP16.04■□□□□ 0.16
SHKBP1-207ENST00000595631 PRKAR2AP13861 404 aaKnown RBP16.04■□□□□ 0.16
SHKBP1-207ENST00000595631 PSMA5P28066 241 aa16.04■□□□□ 0.16
SHKBP1-207ENST00000595631 CYP2C19P33261 490 aa16.04■□□□□ 0.16
SHKBP1-207ENST00000595631 UBXN2AP68543 259 aa16.04■□□□□ 0.16
SHKBP1-207ENST00000595631 FGD1P98174 961 aa16.04■□□□□ 0.16
SHKBP1-207ENST00000595631 ZNF792Q3KQV3 632 aa16.04■□□□□ 0.16
SHKBP1-207ENST00000595631 TKFCQ3LXA3 575 aa16.04■□□□□ 0.16
SHKBP1-207ENST00000595631 RUFY3Q7L099 469 aa16.04■□□□□ 0.16
SHKBP1-207ENST00000595631 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.04■□□□□ 0.16
SHKBP1-207ENST00000595631 HOMER1Q86YM7 354 aa16.04■□□□□ 0.16
SHKBP1-207ENST00000595631 ANKRD35Q8N283 1001 aa16.04■□□□□ 0.16
SHKBP1-207ENST00000595631 CTCFLQ8NI51 663 aaPredicted RBP16.04■□□□□ 0.16
SHKBP1-207ENST00000595631 CLEC4DQ8WXI8 215 aa16.04■□□□□ 0.16
SHKBP1-207ENST00000595631 BRF1Q92994 677 aa16.04■□□□□ 0.16
SHKBP1-207ENST00000595631 DDX11Q96FC9 970 aa16.04■□□□□ 0.16
SHKBP1-207ENST00000595631 MAML3Q96JK9 1138 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms