RNA–Protein interactions for RNA: ENST00000595101.5

USE1-206, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2 BASIC

Gene USE1, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-206ENST00000595101 UNC93B1Q9H1C4 597 aa17.98■□□□□ 0.47
USE1-206ENST00000595101 STRNO43815 780 aa17.97■□□□□ 0.47
USE1-206ENST00000595101 SEC24BO95487 1268 aa17.97■□□□□ 0.47
USE1-206ENST00000595101 PARP1P09874 1014 aaKnown RBP17.97■□□□□ 0.47
USE1-206ENST00000595101 FCER1AP12319 257 aa17.97■□□□□ 0.47
USE1-206ENST00000595101 XRCC5P13010 732 aaKnown RBP17.97■□□□□ 0.47
USE1-206ENST00000595101 ZKSCAN1P17029 563 aaPredicted RBP17.97■□□□□ 0.47
USE1-206ENST00000595101 SART3Q15020 963 aaKnown RBP17.97■□□□□ 0.47
USE1-206ENST00000595101 MUM1L1Q5H9M0 696 aa17.97■□□□□ 0.47
USE1-206ENST00000595101 GPATCH4Q5T3I0 446 aaKnown RBP17.97■□□□□ 0.47
USE1-206ENST00000595101 DPP9Q86TI2 863 aa17.97■□□□□ 0.47
USE1-206ENST00000595101 ADGRF4Q8IZF3 695 aa17.97■□□□□ 0.47
USE1-206ENST00000595101 MMP19Q99542 508 aa17.97■□□□□ 0.47
USE1-206ENST00000595101 APBA2Q99767 749 aa17.97■□□□□ 0.47
USE1-206ENST00000595101 VAT1LQ9HCJ6 419 aa17.97■□□□□ 0.47
USE1-206ENST00000595101 CCL5P13501 91 aa17.96■□□□□ 0.47
USE1-206ENST00000595101 RXRAP19793 462 aa17.96■□□□□ 0.47
USE1-206ENST00000595101 OAZ1P54368 228 aa17.96■□□□□ 0.47
USE1-206ENST00000595101 HMGCRP04035 888 aa17.96■□□□□ 0.47
USE1-206ENST00000595101 HOXC6P09630 235 aa17.96■□□□□ 0.47
USE1-206ENST00000595101 ALAS1P13196 640 aa17.96■□□□□ 0.47
USE1-206ENST00000595101 NUP133Q8WUM0 1156 aa17.96■□□□□ 0.47
USE1-206ENST00000595101 JAKMIP1Q96N16 626 aaKnown RBP17.96■□□□□ 0.47
USE1-206ENST00000595101 PALM3A6NDB9 673 aaPredicted RBP17.95■□□□□ 0.46
USE1-206ENST00000595101 KLRF2D3W0D1 207 aa17.95■□□□□ 0.46
USE1-206ENST00000595101 ICAM1P05362 532 aa17.95■□□□□ 0.46
USE1-206ENST00000595101 FDX1P10109 184 aa17.95■□□□□ 0.46
USE1-206ENST00000595101 EN2P19622 333 aaPredicted RBP17.95■□□□□ 0.46
USE1-206ENST00000595101 CYP2C19P33261 490 aa17.95■□□□□ 0.46
USE1-206ENST00000595101 CACNB2Q08289 660 aaPredicted RBP17.95■□□□□ 0.46
USE1-206ENST00000595101 ASPRV1Q53RT3 343 aa17.95■□□□□ 0.46
USE1-206ENST00000595101 ABRAQ8N0Z2 381 aa17.95■□□□□ 0.46
USE1-206ENST00000595101 TRERF1Q96PN7 1200 aa17.95■□□□□ 0.46
USE1-206ENST00000595101 RNF208Q9H0X6 261 aa17.95■□□□□ 0.46
USE1-206ENST00000595101 JMJD4Q9H9V9 463 aa17.95■□□□□ 0.46
USE1-206ENST00000595101 RNF146Q9NTX7 359 aa17.95■□□□□ 0.46
USE1-206ENST00000595101 CCPG1Q9ULG6 757 aa17.95■□□□□ 0.46
USE1-206ENST00000595101 IGHA2P01877 340 aa17.94■□□□□ 0.46
USE1-206ENST00000595101 KCTD2Q14681 263 aa17.94■□□□□ 0.46
USE1-206ENST00000595101 GRM4Q14833 912 aa17.94■□□□□ 0.46
USE1-206ENST00000595101 DHX32Q7L7V1 743 aaKnown RBP17.94■□□□□ 0.46
USE1-206ENST00000595101 ZNF654Q8IZM8 581 aa17.94■□□□□ 0.46
USE1-206ENST00000595101 TMEM87BQ96K49 555 aa17.94■□□□□ 0.46
USE1-206ENST00000595101 KIAA0100Q14667 2235 aaKnown RBP17.94■□□□□ 0.46
USE1-206ENST00000595101 PRKAR2AP13861 404 aaKnown RBP17.94■□□□□ 0.46
USE1-206ENST00000595101 UBXN2AP68543 259 aa17.94■□□□□ 0.46
USE1-206ENST00000595101 ZNF792Q3KQV3 632 aa17.94■□□□□ 0.46
USE1-206ENST00000595101 NFXL1Q6ZNB6 911 aa17.94■□□□□ 0.46
USE1-206ENST00000595101 CATIPQ7Z7H3 387 aa17.94■□□□□ 0.46
USE1-206ENST00000595101 CCDC144CPQ8IYA2 1237 aa17.94■□□□□ 0.46
USE1-206ENST00000595101 PURBQ96QR8 312 aaKnown RBP17.94■□□□□ 0.46
USE1-206ENST00000595101 BRPF3Q9ULD4 1205 aa17.94■□□□□ 0.46
USE1-206ENST00000595101 DDX49Q9Y6V7 483 aaKnown RBP17.94■□□□□ 0.46
USE1-206ENST00000595101 NFIBO00712 420 aa17.93■□□□□ 0.46
USE1-206ENST00000595101 CYTH3O43739 400 aa17.93■□□□□ 0.46
USE1-206ENST00000595101 LIFRP42702 1097 aa17.93■□□□□ 0.46
USE1-206ENST00000595101 CNTN2Q02246 1040 aa17.93■□□□□ 0.46
USE1-206ENST00000595101 KRT32Q14532 448 aa17.93■□□□□ 0.46
USE1-206ENST00000595101 CDC37Q16543 378 aaPredicted RBP17.93■□□□□ 0.46
USE1-206ENST00000595101 USH1GQ495M9 461 aa17.93■□□□□ 0.46
USE1-206ENST00000595101 MAP3K21Q5TCX8 1036 aa17.93■□□□□ 0.46
USE1-206ENST00000595101 CMTR1Q8N1G2 835 aaKnown RBP17.93■□□□□ 0.46
USE1-206ENST00000595101 ANKRD35Q8N283 1001 aa17.93■□□□□ 0.46
USE1-206ENST00000595101 CHST13Q8NET6 341 aa17.93■□□□□ 0.46
USE1-206ENST00000595101 MAML3Q96JK9 1138 aa17.93■□□□□ 0.46
USE1-206ENST00000595101 MTA3Q9BTC8 594 aa17.93■□□□□ 0.46
USE1-206ENST00000595101 A1CFQ9NQ94 594 aaKnown RBP17.93■□□□□ 0.46
USE1-206ENST00000595101 SMCHD1A6NHR9 2005 aa17.93■□□□□ 0.46
USE1-206ENST00000595101 DNAJC25-GNG10A0A024R161 153 aa17.92■□□□□ 0.46
USE1-206ENST00000595101 CCDC69A6NI79 296 aa17.92■□□□□ 0.46
USE1-206ENST00000595101 DHX16O60231 1041 aaKnown RBP17.92■□□□□ 0.46
USE1-206ENST00000595101 CCND3P30281 292 aaPredicted RBP17.92■□□□□ 0.46
USE1-206ENST00000595101 COPB2P35606 906 aa17.92■□□□□ 0.46
USE1-206ENST00000595101 QRICH1Q2TAL8 776 aa17.92■□□□□ 0.46
USE1-206ENST00000595101 PRAMEF19Q5SWL8 479 aa17.92■□□□□ 0.46
USE1-206ENST00000595101 DDX11Q96FC9 970 aa17.92■□□□□ 0.46
USE1-206ENST00000595101 FGD4Q96M96 766 aa17.92■□□□□ 0.46
USE1-206ENST00000595101 TMEM106CQ9BVX2 250 aa17.92■□□□□ 0.46
USE1-206ENST00000595101 ACAD9Q9H845 621 aa17.92■□□□□ 0.46
USE1-206ENST00000595101 PPP1R11O60927 126 aaPredicted RBP17.91■□□□□ 0.46
USE1-206ENST00000595101 TRPV1Q8NER1 839 aa17.91■□□□□ 0.46
USE1-206ENST00000595101 CLEC4DQ8WXI8 215 aa17.91■□□□□ 0.46
USE1-206ENST00000595101 PIBF1Q8WXW3 757 aa17.91■□□□□ 0.46
USE1-206ENST00000595101 GTF3C3Q9Y5Q9 886 aa17.91■□□□□ 0.46
USE1-206ENST00000595101 PLEKHA8P1O95397 391 aa17.91■□□□□ 0.46
USE1-206ENST00000595101 CASTP20810 708 aaKnown RBP17.91■□□□□ 0.46
USE1-206ENST00000595101 SGMS1Q86VZ5 419 aa17.91■□□□□ 0.46
USE1-206ENST00000595101 SHISA4Q96DD7 197 aa17.91■□□□□ 0.46
USE1-206ENST00000595101 DEFB118Q96PH6 123 aa17.91■□□□□ 0.46
USE1-206ENST00000595101 PAK6Q9NQU5 681 aaPredicted RBP17.91■□□□□ 0.46
USE1-206ENST00000595101 FBXO40Q9UH90 709 aa17.91■□□□□ 0.46
USE1-206ENST00000595101 DDAH1O94760 285 aa17.9■□□□□ 0.46
USE1-206ENST00000595101 C8orf34Q49A92 452 aa17.9■□□□□ 0.46
USE1-206ENST00000595101 NSMFQ6X4W1 530 aa17.9■□□□□ 0.46
USE1-206ENST00000595101 Q6ZUG5 572 aa17.9■□□□□ 0.46
USE1-206ENST00000595101 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.9■□□□□ 0.46
USE1-206ENST00000595101 MICU3Q86XE3 530 aa17.9■□□□□ 0.46
USE1-206ENST00000595101 HOMER1Q86YM7 354 aa17.9■□□□□ 0.46
USE1-206ENST00000595101 TMTC2Q8N394 836 aa17.9■□□□□ 0.46
USE1-206ENST00000595101 TBC1D5Q92609 795 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms