RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 ANO10Q9NW15 660 aa17.39■□□□□ 0.37
PNKP-204ENST00000594661 GOLGA6L19H0YKK7 550 aa17.38■□□□□ 0.37
PNKP-204ENST00000594661 PPP6R2O75170 966 aa17.38■□□□□ 0.37
PNKP-204ENST00000594661 ZNF202O95125 648 aa17.38■□□□□ 0.37
PNKP-204ENST00000594661 PFKFB1P16118 471 aa17.38■□□□□ 0.37
PNKP-204ENST00000594661 TOB1P50616 345 aaPredicted RBP17.38■□□□□ 0.37
PNKP-204ENST00000594661 RASGRP2Q7LDG7 609 aa17.38■□□□□ 0.37
PNKP-204ENST00000594661 EFCAB13Q8IY85 973 aa17.38■□□□□ 0.37
PNKP-204ENST00000594661 SUPT20HQ8NEM7 779 aa17.38■□□□□ 0.37
PNKP-204ENST00000594661 MAD2L2Q9UI95 211 aa17.38■□□□□ 0.37
PNKP-204ENST00000594661 MTMR7Q9Y216 660 aa17.38■□□□□ 0.37
PNKP-204ENST00000594661 VEGFAP15692 232 aaPredicted RBP17.38■□□□□ 0.37
PNKP-204ENST00000594661 XBP1P17861 261 aa17.38■□□□□ 0.37
PNKP-204ENST00000594661 CEP95Q96GE4 821 aa17.38■□□□□ 0.37
PNKP-204ENST00000594661 CCDC189A1A4V9 331 aa17.37■□□□□ 0.37
PNKP-204ENST00000594661 MAP2K2P36507 400 aa17.37■□□□□ 0.37
PNKP-204ENST00000594661 CACNB3P54284 484 aa17.37■□□□□ 0.37
PNKP-204ENST00000594661 ZFPM1Q8IX07 1006 aa17.37■□□□□ 0.37
PNKP-204ENST00000594661 GPR161Q8N6U8 529 aaKnown RBP17.37■□□□□ 0.37
PNKP-204ENST00000594661 ANKRD20A12PQ8NF67 263 aa17.37■□□□□ 0.37
PNKP-204ENST00000594661 IMPACTQ9P2X3 320 aa17.37■□□□□ 0.37
PNKP-204ENST00000594661 RBM5P52756 815 aaKnown RBP eCLIP17.36■□□□□ 0.37
PNKP-204ENST00000594661 ETF1P62495 437 aaKnown RBP17.36■□□□□ 0.37
PNKP-204ENST00000594661 NPY5RQ15761 445 aa17.36■□□□□ 0.37
PNKP-204ENST00000594661 SLC35G1Q2M3R5 365 aa17.36■□□□□ 0.37
PNKP-204ENST00000594661 CCDC34Q96HJ3 373 aa17.36■□□□□ 0.37
PNKP-204ENST00000594661 MRIQ9BWK5 157 aa17.36■□□□□ 0.37
PNKP-204ENST00000594661 ARFGAP3Q9NP61 516 aa17.36■□□□□ 0.37
PNKP-204ENST00000594661 KIAA1468Q9P260 1216 aa17.36■□□□□ 0.37
PNKP-204ENST00000594661 PLIN4Q96Q06 1357 aa17.36■□□□□ 0.37
PNKP-204ENST00000594661 KIF13BQ9NQT8 1826 aa17.36■□□□□ 0.37
PNKP-204ENST00000594661 FAM205CA6NFA0 338 aa17.36■□□□□ 0.37
PNKP-204ENST00000594661 BECN2A8MW95 431 aa17.36■□□□□ 0.37
PNKP-204ENST00000594661 H3BQF6 201 aa17.36■□□□□ 0.37
PNKP-204ENST00000594661 SCG2P13521 617 aa17.36■□□□□ 0.37
PNKP-204ENST00000594661 KRT2P35908 639 aa17.36■□□□□ 0.37
PNKP-204ENST00000594661 ZRSR1Q15695 479 aaKnown RBP17.36■□□□□ 0.37
PNKP-204ENST00000594661 PFKFB3Q16875 520 aaPredicted RBP17.36■□□□□ 0.37
PNKP-204ENST00000594661 CEP57L1Q8IYX8 460 aa17.36■□□□□ 0.37
PNKP-204ENST00000594661 DNAI1Q9UI46 699 aa17.36■□□□□ 0.37
PNKP-204ENST00000594661 SERPINB13Q9UIV8 391 aa17.36■□□□□ 0.37
PNKP-204ENST00000594661 MYH8P13535 1937 aa17.35■□□□□ 0.37
PNKP-204ENST00000594661 ZBTB7AO95365 584 aa17.35■□□□□ 0.37
PNKP-204ENST00000594661 SLURP2P0DP57 97 aa17.35■□□□□ 0.37
PNKP-204ENST00000594661 AKR1B1P15121 316 aa17.35■□□□□ 0.37
PNKP-204ENST00000594661 SYKP43405 635 aa17.35■□□□□ 0.37
PNKP-204ENST00000594661 HDLBPQ00341 1268 aaKnown RBP17.35■□□□□ 0.37
PNKP-204ENST00000594661 EARS2Q5JPH6 523 aaKnown RBP17.35■□□□□ 0.37
PNKP-204ENST00000594661 MSL3Q8N5Y2 521 aaKnown RBP17.35■□□□□ 0.37
PNKP-204ENST00000594661 COL4A5P29400 1685 aa17.35■□□□□ 0.37
PNKP-204ENST00000594661 MAP2K7O14733 419 aa17.35■□□□□ 0.37
PNKP-204ENST00000594661 NOVP48745 357 aa17.35■□□□□ 0.37
PNKP-204ENST00000594661 RILPL1Q5EBL4 403 aa17.35■□□□□ 0.37
PNKP-204ENST00000594661 FOXR1Q6PIV2 292 aa17.35■□□□□ 0.37
PNKP-204ENST00000594661 SHC4Q6S5L8 630 aa17.35■□□□□ 0.37
PNKP-204ENST00000594661 CLIC6Q96NY7 704 aa17.35■□□□□ 0.37
PNKP-204ENST00000594661 NAT10Q9H0A0 1025 aaKnown RBP17.35■□□□□ 0.37
PNKP-204ENST00000594661 CABP5Q9NP86 173 aa17.35■□□□□ 0.37
PNKP-204ENST00000594661 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.35■□□□□ 0.37
PNKP-204ENST00000594661 SERPINA10Q9UK55 444 aa17.35■□□□□ 0.37
PNKP-204ENST00000594661 SIPA1L1O43166 1804 aa17.34■□□□□ 0.37
PNKP-204ENST00000594661 PALM3A6NDB9 673 aaPredicted RBP17.34■□□□□ 0.37
PNKP-204ENST00000594661 CYTH3O43739 400 aa17.34■□□□□ 0.37
PNKP-204ENST00000594661 GOLGA8HP0CJ92 632 aa17.34■□□□□ 0.37
PNKP-204ENST00000594661 SHMT1P34896 483 aa17.34■□□□□ 0.37
PNKP-204ENST00000594661 TCP10Q12799 353 aa17.34■□□□□ 0.37
PNKP-204ENST00000594661 DHX8Q14562 1220 aaKnown RBP17.34■□□□□ 0.37
PNKP-204ENST00000594661 RTKN2Q8IZC4 609 aa17.34■□□□□ 0.37
PNKP-204ENST00000594661 FAM198AQ9UFP1 575 aa17.34■□□□□ 0.37
PNKP-204ENST00000594661 PCDHB6Q9Y5E3 794 aa17.34■□□□□ 0.37
PNKP-204ENST00000594661 PSME4Q14997 1843 aa17.34■□□□□ 0.37
PNKP-204ENST00000594661 CUTAO60888 179 aa17.33■□□□□ 0.37
PNKP-204ENST00000594661 TOP1P11387 765 aaKnown RBP17.33■□□□□ 0.37
PNKP-204ENST00000594661 CLEC10AQ8IUN9 316 aa17.33■□□□□ 0.37
PNKP-204ENST00000594661 DHX40Q8IX18 779 aaKnown RBP17.33■□□□□ 0.37
PNKP-204ENST00000594661 CCDC150Q8NCX0 1101 aa17.33■□□□□ 0.37
PNKP-204ENST00000594661 TNFRSF25Q93038 417 aa17.33■□□□□ 0.37
PNKP-204ENST00000594661 PSMD1Q99460 953 aa17.33■□□□□ 0.37
PNKP-204ENST00000594661 ZNF277Q9NRM2 450 aaPredicted RBP17.33■□□□□ 0.37
PNKP-204ENST00000594661 SWAP70Q9UH65 585 aa17.33■□□□□ 0.37
PNKP-204ENST00000594661 IGKV6D-41A0A0C4DH26 115 aa17.33■□□□□ 0.36
PNKP-204ENST00000594661 ADAMTS3O15072 1205 aa17.33■□□□□ 0.36
PNKP-204ENST00000594661 CCP110O43303 1012 aa17.33■□□□□ 0.36
PNKP-204ENST00000594661 HLA-DOAP06340 250 aa17.33■□□□□ 0.36
PNKP-204ENST00000594661 GNAQP50148 359 aa17.33■□□□□ 0.36
PNKP-204ENST00000594661 NBPF20Q3BBV1 942 aa17.33■□□□□ 0.36
PNKP-204ENST00000594661 RESP18Q5W5W9 173 aa17.33■□□□□ 0.36
PNKP-204ENST00000594661 TADA2BQ86TJ2 420 aa17.33■□□□□ 0.36
PNKP-204ENST00000594661 GPKOWQ92917 476 aaPredicted RBP eCLIP17.33■□□□□ 0.36
PNKP-204ENST00000594661 CPVLQ9H3G5 476 aa17.33■□□□□ 0.36
PNKP-204ENST00000594661 MTMR4Q9NYA4 1195 aa17.33■□□□□ 0.36
PNKP-204ENST00000594661 HPSEQ9Y251 543 aa17.33■□□□□ 0.36
PNKP-204ENST00000594661 A0A087WUV0 522 aaPredicted RBP17.32■□□□□ 0.36
PNKP-204ENST00000594661 AOPEPQ8N6M6 819 aa17.32■□□□□ 0.36
PNKP-204ENST00000594661 KRI1Q8N9T8 703 aaKnown RBP17.32■□□□□ 0.36
PNKP-204ENST00000594661 IDI2Q9BXS1 227 aa17.32■□□□□ 0.36
PNKP-204ENST00000594661 DNAJC18Q9H819 358 aa17.32■□□□□ 0.36
PNKP-204ENST00000594661 DDTLA6NHG4 134 aaPredicted RBP17.32■□□□□ 0.36
PNKP-204ENST00000594661 BIN1O00499 593 aa17.32■□□□□ 0.36
PNKP-204ENST00000594661 EIF6P56537 245 aaKnown RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms