RNA–Protein interactions for RNA: ENST00000594081.1

SMG9-202, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG9, Length 563 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-202ENST00000594081 WNT8AQ9H1J5 351 aa10.24□□□□□ -0.77
SMG9-202ENST00000594081 ABHD16BQ9H3Z7 469 aa10.24□□□□□ -0.77
SMG9-202ENST00000594081 ARMT1Q9H993 441 aa10.24□□□□□ -0.77
SMG9-202ENST00000594081 RIPK3Q9Y572 518 aa10.24□□□□□ -0.77
SMG9-202ENST00000594081 PCDHA11Q9Y5I1 949 aa10.24□□□□□ -0.77
SMG9-202ENST00000594081 MYH7P12883 1935 aa10.24□□□□□ -0.77
SMG9-202ENST00000594081 MUC6Q6W4X9 2439 aa10.24□□□□□ -0.77
SMG9-202ENST00000594081 TRANK1O15050 2925 aa10.23□□□□□ -0.77
SMG9-202ENST00000594081 MYH4Q9Y623 1939 aa10.23□□□□□ -0.77
SMG9-202ENST00000594081 CYP2D7A0A087X1C5 515 aa10.23□□□□□ -0.77
SMG9-202ENST00000594081 TCRBV5S4A2TA0A5A2 114 aa10.23□□□□□ -0.77
SMG9-202ENST00000594081 FAM86C2PA6NEL3 165 aa10.23□□□□□ -0.77
SMG9-202ENST00000594081 ZBBXA8MT70 800 aa10.23□□□□□ -0.77
SMG9-202ENST00000594081 GTPBP6O43824 516 aaPredicted RBP10.23□□□□□ -0.77
SMG9-202ENST00000594081 ATP2A2P16615 1042 aaKnown RBP10.23□□□□□ -0.77
SMG9-202ENST00000594081 CDK8P49336 464 aa10.23□□□□□ -0.77
SMG9-202ENST00000594081 BEX3Q00994 111 aa10.23□□□□□ -0.77
SMG9-202ENST00000594081 CXCL17Q6UXB2 119 aa10.23□□□□□ -0.77
SMG9-202ENST00000594081 ARMCX2Q7L311 632 aa10.23□□□□□ -0.77
SMG9-202ENST00000594081 TMEM57Q8N5G2 664 aa10.23□□□□□ -0.77
SMG9-202ENST00000594081 SLC43A3Q8NBI5 491 aa10.23□□□□□ -0.77
SMG9-202ENST00000594081 KHSRPQ92945 711 aaKnown RBP eCLIP10.23□□□□□ -0.77
SMG9-202ENST00000594081 NUP88Q99567 741 aaPredicted RBP10.23□□□□□ -0.77
SMG9-202ENST00000594081 NOC4LQ9BVI4 516 aaKnown RBP10.23□□□□□ -0.77
SMG9-202ENST00000594081 KANSL2Q9H9L4 492 aa10.23□□□□□ -0.77
SMG9-202ENST00000594081 C11orf16Q9NQ32 467 aa10.23□□□□□ -0.77
SMG9-202ENST00000594081 MTCH2Q9Y6C9 303 aa10.23□□□□□ -0.77
SMG9-202ENST00000594081 SLC4A7Q9Y6M7 1214 aa10.23□□□□□ -0.77
SMG9-202ENST00000594081 SCN5AQ14524 2016 aa10.23□□□□□ -0.77
SMG9-202ENST00000594081 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.22□□□□□ -0.77
SMG9-202ENST00000594081 EPOPA6NHQ4 379 aa10.22□□□□□ -0.77
SMG9-202ENST00000594081 RFXAPO00287 272 aa10.22□□□□□ -0.77
SMG9-202ENST00000594081 PRKAB2O43741 272 aa10.22□□□□□ -0.77
SMG9-202ENST00000594081 B4GALT4O60513 344 aa10.22□□□□□ -0.77
SMG9-202ENST00000594081 CA3P07451 260 aa10.22□□□□□ -0.77
SMG9-202ENST00000594081 SLC4A3P48751 1232 aa10.22□□□□□ -0.77
SMG9-202ENST00000594081 NKX3-2P78367 333 aa10.22□□□□□ -0.77
SMG9-202ENST00000594081 KRT40Q6A162 431 aa10.22□□□□□ -0.77
SMG9-202ENST00000594081 C16orf86Q6ZW13 317 aa10.22□□□□□ -0.77
SMG9-202ENST00000594081 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.22□□□□□ -0.77
SMG9-202ENST00000594081 TLK2Q86UE8 772 aa10.22□□□□□ -0.77
SMG9-202ENST00000594081 CCDC144CPQ8IYA2 1237 aa10.22□□□□□ -0.77
SMG9-202ENST00000594081 SCLYQ96I15 445 aa10.22□□□□□ -0.77
SMG9-202ENST00000594081 DNAJC2Q99543 621 aaKnown RBP10.22□□□□□ -0.77
SMG9-202ENST00000594081 KATNBL1Q9H079 304 aa10.22□□□□□ -0.77
SMG9-202ENST00000594081 CERS4Q9HA82 394 aa10.22□□□□□ -0.77
SMG9-202ENST00000594081 COG5Q9UP83 839 aa10.22□□□□□ -0.77
SMG9-202ENST00000594081 ASTN1O14525 1302 aa10.22□□□□□ -0.77
SMG9-202ENST00000594081 GOLIM4O00461 696 aa10.21□□□□□ -0.77
SMG9-202ENST00000594081 ATP2A1O14983 1001 aa10.21□□□□□ -0.77
SMG9-202ENST00000594081 GPR37L1O60883 481 aa10.21□□□□□ -0.77
SMG9-202ENST00000594081 CABYRO75952 493 aa10.21□□□□□ -0.77
SMG9-202ENST00000594081 MBD4O95243 580 aa10.21□□□□□ -0.77
SMG9-202ENST00000594081 POU3F3P20264 500 aaPredicted RBP10.21□□□□□ -0.77
SMG9-202ENST00000594081 ITGA7Q13683 1181 aa10.21□□□□□ -0.77
SMG9-202ENST00000594081 C12orf60Q5U649 245 aa10.21□□□□□ -0.77
SMG9-202ENST00000594081 AMOTL1Q8IY63 956 aa10.21□□□□□ -0.77
SMG9-202ENST00000594081 CPXCR1Q8N123 301 aa10.21□□□□□ -0.77
SMG9-202ENST00000594081 ANKRD35Q8N283 1001 aa10.21□□□□□ -0.77
SMG9-202ENST00000594081 VWCEQ96DN2 955 aa10.21□□□□□ -0.77
SMG9-202ENST00000594081 TRPV6Q9H1D0 765 aa10.21□□□□□ -0.77
SMG9-202ENST00000594081 RAVER2Q9HCJ3 691 aaKnown RBP10.21□□□□□ -0.77
SMG9-202ENST00000594081 ATP8A2Q9NTI2 1148 aa10.21□□□□□ -0.77
SMG9-202ENST00000594081 EXOC6BQ9Y2D4 811 aa10.21□□□□□ -0.77
SMG9-202ENST00000594081 GRIN2DO15399 1336 aa10.21□□□□□ -0.78
SMG9-202ENST00000594081 LCTP09848 1927 aa10.21□□□□□ -0.78
SMG9-202ENST00000594081 PTPRSQ13332 1948 aa10.21□□□□□ -0.78
SMG9-202ENST00000594081 USP17L12C9JPN9 530 aa10.2□□□□□ -0.78
SMG9-202ENST00000594081 USP17L21D6R901 530 aa10.2□□□□□ -0.78
SMG9-202ENST00000594081 TLL1O43897 1013 aa10.2□□□□□ -0.78
SMG9-202ENST00000594081 NDUFB10O96000 172 aa10.2□□□□□ -0.78
SMG9-202ENST00000594081 PFKMP08237 780 aa10.2□□□□□ -0.78
SMG9-202ENST00000594081 PTGS1P23219 599 aa10.2□□□□□ -0.78
SMG9-202ENST00000594081 PSMC6P62333 389 aa10.2□□□□□ -0.78
SMG9-202ENST00000594081 TNFAIP2Q03169 654 aa10.2□□□□□ -0.78
SMG9-202ENST00000594081 TTLL4Q14679 1199 aa10.2□□□□□ -0.78
SMG9-202ENST00000594081 FSCN1Q16658 493 aaKnown RBP10.2□□□□□ -0.78
SMG9-202ENST00000594081 SLFNL1Q499Z3 407 aa10.2□□□□□ -0.78
SMG9-202ENST00000594081 TMEM67Q5HYA8 995 aa10.2□□□□□ -0.78
SMG9-202ENST00000594081 ZBED9Q6R2W3 1325 aa10.2□□□□□ -0.78
SMG9-202ENST00000594081 NOL8Q76FK4 1167 aaKnown RBP10.2□□□□□ -0.78
SMG9-202ENST00000594081 ALYREFQ86V81 257 aaKnown RBP10.2□□□□□ -0.78
SMG9-202ENST00000594081 ERC1Q8IUD2 1116 aa10.2□□□□□ -0.78
SMG9-202ENST00000594081 RPUSD2Q8IZ73 545 aaKnown RBP10.2□□□□□ -0.78
SMG9-202ENST00000594081 HLA-CQ95604 372 aa10.2□□□□□ -0.78
SMG9-202ENST00000594081 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.2□□□□□ -0.78
SMG9-202ENST00000594081 FBXO40Q9UH90 709 aa10.2□□□□□ -0.78
SMG9-202ENST00000594081 GNEQ9Y223 722 aaKnown RBP10.2□□□□□ -0.78
SMG9-202ENST00000594081 CTDP1Q9Y5B0 961 aaPredicted RBP10.2□□□□□ -0.78
SMG9-202ENST00000594081 ZBED4O75132 1171 aa10.19□□□□□ -0.78
SMG9-202ENST00000594081 ARHGEF15O94989 841 aa10.19□□□□□ -0.78
SMG9-202ENST00000594081 ADD2P35612 726 aa10.19□□□□□ -0.78
SMG9-202ENST00000594081 CNTN2Q02246 1040 aa10.19□□□□□ -0.78
SMG9-202ENST00000594081 ZKSCAN2Q63HK3 967 aa10.19□□□□□ -0.78
SMG9-202ENST00000594081 PRPF38AQ8NAV1 312 aaKnown RBP10.19□□□□□ -0.78
SMG9-202ENST00000594081 CHST13Q8NET6 341 aa10.19□□□□□ -0.78
SMG9-202ENST00000594081 ARNTL2Q8WYA1 636 aa10.19□□□□□ -0.78
SMG9-202ENST00000594081 KIFC2Q96AC6 838 aa10.19□□□□□ -0.78
SMG9-202ENST00000594081 DDRGK1Q96HY6 314 aa10.19□□□□□ -0.78
SMG9-202ENST00000594081 AGBL1Q96MI9 1066 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms