RNA–Protein interactions for RNA: ENST00000592632.5

DDX39A-218, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 586 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-218ENST00000592632 CCDC174Q6PII3 467 aa15.2■□□□□ 0.02
DDX39A-218ENST00000592632 DPP9Q86TI2 863 aa15.2■□□□□ 0.02
DDX39A-218ENST00000592632 STAG2Q8N3U4 1231 aa15.2■□□□□ 0.02
DDX39A-218ENST00000592632 NEK1Q96PY6 1258 aa15.2■□□□□ 0.02
DDX39A-218ENST00000592632 MMP19Q99542 508 aa15.2■□□□□ 0.02
DDX39A-218ENST00000592632 APBA2Q99767 749 aa15.2■□□□□ 0.02
DDX39A-218ENST00000592632 USP26Q9BXU7 913 aa15.2■□□□□ 0.02
DDX39A-218ENST00000592632 LY9Q9HBG7 655 aa15.2■□□□□ 0.02
DDX39A-218ENST00000592632 FLRT1Q9NZU1 646 aa15.2■□□□□ 0.02
DDX39A-218ENST00000592632 BRCA2P51587 3418 aa15.2■□□□□ 0.02
DDX39A-218ENST00000592632 ERICH2A1L162 156 aa15.19■□□□□ 0.02
DDX39A-218ENST00000592632 PALM3A6NDB9 673 aaPredicted RBP15.19■□□□□ 0.02
DDX39A-218ENST00000592632 HMGCRP04035 888 aa15.19■□□□□ 0.02
DDX39A-218ENST00000592632 PARP1P09874 1014 aaKnown RBP15.19■□□□□ 0.02
DDX39A-218ENST00000592632 CCL5P13501 91 aa15.19■□□□□ 0.02
DDX39A-218ENST00000592632 TROAPQ12815 778 aa15.19■□□□□ 0.02
DDX39A-218ENST00000592632 ASPRV1Q53RT3 343 aa15.19■□□□□ 0.02
DDX39A-218ENST00000592632 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.19■□□□□ 0.02
DDX39A-218ENST00000592632 TRMT44Q8IYL2 757 aaKnown RBP15.19■□□□□ 0.02
DDX39A-218ENST00000592632 CHST13Q8NET6 341 aa15.19■□□□□ 0.02
DDX39A-218ENST00000592632 TMEM87BQ96K49 555 aa15.19■□□□□ 0.02
DDX39A-218ENST00000592632 UNC93B1Q9H1C4 597 aa15.19■□□□□ 0.02
DDX39A-218ENST00000592632 MAD2L2Q9UI95 211 aa15.19■□□□□ 0.02
DDX39A-218ENST00000592632 SNX14Q9Y5W7 946 aa15.19■□□□□ 0.02
DDX39A-218ENST00000592632 SH2B2O14492 632 aaPredicted RBP15.18■□□□□ 0.02
DDX39A-218ENST00000592632 EPB41L2O43491 1005 aaKnown RBP15.18■□□□□ 0.02
DDX39A-218ENST00000592632 ICAM1P05362 532 aa15.18■□□□□ 0.02
DDX39A-218ENST00000592632 PGK2P07205 417 aa15.18■□□□□ 0.02
DDX39A-218ENST00000592632 ZKSCAN1P17029 563 aaPredicted RBP15.18■□□□□ 0.02
DDX39A-218ENST00000592632 TAL1P17542 331 aaPredicted RBP15.18■□□□□ 0.02
DDX39A-218ENST00000592632 KRT32Q14532 448 aa15.18■□□□□ 0.02
DDX39A-218ENST00000592632 GRM4Q14833 912 aa15.18■□□□□ 0.02
DDX39A-218ENST00000592632 SLC35G1Q2M3R5 365 aa15.18■□□□□ 0.02
DDX39A-218ENST00000592632 TKFCQ3LXA3 575 aa15.18■□□□□ 0.02
DDX39A-218ENST00000592632 MAP3K21Q5TCX8 1036 aa15.18■□□□□ 0.02
DDX39A-218ENST00000592632 DHX32Q7L7V1 743 aaKnown RBP15.18■□□□□ 0.02
DDX39A-218ENST00000592632 ADGRF4Q8IZF3 695 aa15.18■□□□□ 0.02
DDX39A-218ENST00000592632 LRRC2Q9BYS8 371 aa15.18■□□□□ 0.02
DDX39A-218ENST00000592632 RNF208Q9H0X6 261 aa15.18■□□□□ 0.02
DDX39A-218ENST00000592632 PCDH10Q9P2E7 1040 aa15.18■□□□□ 0.02
DDX39A-218ENST00000592632 DNAJC25-GNG10A0A024R161 153 aa15.17■□□□□ 0.02
DDX39A-218ENST00000592632 KLRF2D3W0D1 207 aa15.17■□□□□ 0.02
DDX39A-218ENST00000592632 ALAS1P13196 640 aa15.17■□□□□ 0.02
DDX39A-218ENST00000592632 LIFRP42702 1097 aa15.17■□□□□ 0.02
DDX39A-218ENST00000592632 CACNB2Q08289 660 aaPredicted RBP15.17■□□□□ 0.02
DDX39A-218ENST00000592632 KCTD2Q14681 263 aa15.17■□□□□ 0.02
DDX39A-218ENST00000592632 ZNF792Q3KQV3 632 aa15.17■□□□□ 0.02
DDX39A-218ENST00000592632 CATIPQ7Z7H3 387 aa15.17■□□□□ 0.02
DDX39A-218ENST00000592632 TMTC2Q8N394 836 aa15.17■□□□□ 0.02
DDX39A-218ENST00000592632 TRERF1Q96PN7 1200 aa15.17■□□□□ 0.02
DDX39A-218ENST00000592632 VAT1LQ9HCJ6 419 aa15.17■□□□□ 0.02
DDX39A-218ENST00000592632 HOMER2Q9NSB8 354 aa15.17■□□□□ 0.02
DDX39A-218ENST00000592632 RNF146Q9NTX7 359 aa15.17■□□□□ 0.02
DDX39A-218ENST00000592632 FBXO40Q9UH90 709 aa15.17■□□□□ 0.02
DDX39A-218ENST00000592632 ZNF236Q9UL36 1845 aa15.17■□□□□ 0.02
DDX39A-218ENST00000592632 GJB1P08034 283 aa15.16■□□□□ 0.02
DDX39A-218ENST00000592632 CYP2C19P33261 490 aa15.16■□□□□ 0.02
DDX39A-218ENST00000592632 MUM1L1Q5H9M0 696 aa15.16■□□□□ 0.02
DDX39A-218ENST00000592632 OLFML2BQ68BL8 750 aa15.16■□□□□ 0.02
DDX39A-218ENST00000592632 MAML3Q96JK9 1138 aa15.16■□□□□ 0.02
DDX39A-218ENST00000592632 TCEANC2Q96MN5 208 aa15.16■□□□□ 0.02
DDX39A-218ENST00000592632 JMJD4Q9H9V9 463 aa15.16■□□□□ 0.02
DDX39A-218ENST00000592632 PAK6Q9NQU5 681 aaPredicted RBP15.16■□□□□ 0.02
DDX39A-218ENST00000592632 SLC5A4Q9NY91 659 aa15.16■□□□□ 0.02
DDX39A-218ENST00000592632 CCPG1Q9ULG6 757 aa15.16■□□□□ 0.02
DDX39A-218ENST00000592632 DIS3Q9Y2L1 958 aaKnown RBP15.16■□□□□ 0.02
DDX39A-218ENST00000592632 PLXNA1Q9UIW2 1896 aa15.16■□□□□ 0.02
DDX39A-218ENST00000592632 CEP290O15078 2479 aa15.16■□□□□ 0.02
DDX39A-218ENST00000592632 RPTORQ8N122 1335 aa15.16■□□□□ 0.02
DDX39A-218ENST00000592632 WDR19Q8NEZ3 1342 aa15.16■□□□□ 0.02
DDX39A-218ENST00000592632 PRKAR2AP13861 404 aaKnown RBP15.15■□□□□ 0.02
DDX39A-218ENST00000592632 CPA1P15085 419 aa15.15■□□□□ 0.02
DDX39A-218ENST00000592632 MFSD14CQ5VZR4 134 aa15.15■□□□□ 0.02
DDX39A-218ENST00000592632 SGMS1Q86VZ5 419 aa15.15■□□□□ 0.02
DDX39A-218ENST00000592632 ZNF654Q8IZM8 581 aa15.15■□□□□ 0.02
DDX39A-218ENST00000592632 ANKRD35Q8N283 1001 aa15.15■□□□□ 0.02
DDX39A-218ENST00000592632 MTMR8Q96EF0 704 aa15.15■□□□□ 0.02
DDX39A-218ENST00000592632 DDX11Q96FC9 970 aa15.15■□□□□ 0.02
DDX39A-218ENST00000592632 MAP3K14Q99558 947 aa15.15■□□□□ 0.02
DDX39A-218ENST00000592632 MYL10Q9BUA6 226 aa15.15■□□□□ 0.02
DDX39A-218ENST00000592632 ACAD9Q9H845 621 aa15.15■□□□□ 0.02
DDX39A-218ENST00000592632 HMX1Q9NP08 348 aaPredicted RBP15.15■□□□□ 0.02
DDX39A-218ENST00000592632 MKI67P46013 3256 aaKnown RBP15.15■□□□□ 0.02
DDX39A-218ENST00000592632 MYH6P13533 1939 aa15.15■□□□□ 0.02
DDX39A-218ENST00000592632 HMGB1P09429 215 aaKnown RBP15.14■□□□□ 0.01
DDX39A-218ENST00000592632 CCND3P30281 292 aaPredicted RBP15.14■□□□□ 0.01
DDX39A-218ENST00000592632 GJA8P48165 433 aa15.14■□□□□ 0.01
DDX39A-218ENST00000592632 NFXL1Q6ZNB6 911 aa15.14■□□□□ 0.01
DDX39A-218ENST00000592632 TRPV1Q8NER1 839 aa15.14■□□□□ 0.01
DDX39A-218ENST00000592632 NUP133Q8WUM0 1156 aa15.14■□□□□ 0.01
DDX39A-218ENST00000592632 CLEC4DQ8WXI8 215 aa15.14■□□□□ 0.01
DDX39A-218ENST00000592632 FGD4Q96M96 766 aa15.14■□□□□ 0.01
DDX39A-218ENST00000592632 JAKMIP1Q96N16 626 aaKnown RBP15.14■□□□□ 0.01
DDX39A-218ENST00000592632 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.14■□□□□ 0.011e-7■■□□□ 11.6
DDX39A-218ENST00000592632 RIOX1Q9H6W3 641 aa15.14■□□□□ 0.01
DDX39A-218ENST00000592632 A1CFQ9NQ94 594 aaKnown RBP15.14■□□□□ 0.01
DDX39A-218ENST00000592632 PNMA2Q9UL42 364 aa15.14■□□□□ 0.01
DDX39A-218ENST00000592632 MCM3APO60318 1980 aa15.14■□□□□ 0.01
DDX39A-218ENST00000592632 RBBP6Q7Z6E9 1792 aaKnown RBP15.13■□□□□ 0.01
DDX39A-218ENST00000592632 CCDC69A6NI79 296 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms