RNA–Protein interactions for RNA: ENST00000590901.5

CXXC1-214, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 2,562 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-214ENST00000590901 TMEM47Q9BQJ4 181 aa17.54■□□□□ 0.4
CXXC1-214ENST00000590901 MTA3Q9BTC8 594 aa17.54■□□□□ 0.4
CXXC1-214ENST00000590901 PCDHB6Q9Y5E3 794 aa17.54■□□□□ 0.4
CXXC1-214ENST00000590901 CYTH3O43739 400 aa17.53■□□□□ 0.4
CXXC1-214ENST00000590901 CUTAO60888 179 aa17.53■□□□□ 0.4
CXXC1-214ENST00000590901 MAGEA9P43362 315 aa17.53■□□□□ 0.4
CXXC1-214ENST00000590901 PNOCQ13519 176 aa17.53■□□□□ 0.4
CXXC1-214ENST00000590901 SLC39A14Q15043 492 aa17.53■□□□□ 0.4
CXXC1-214ENST00000590901 TYW1BQ6NUM6 668 aa17.53■□□□□ 0.4
CXXC1-214ENST00000590901 TRIM22Q8IYM9 498 aa17.53■□□□□ 0.4
CXXC1-214ENST00000590901 ZSWIM4Q9H7M6 989 aa17.53■□□□□ 0.4
CXXC1-214ENST00000590901 HPSEQ9Y251 543 aa17.53■□□□□ 0.4
CXXC1-214ENST00000590901 ERLIN1O75477 346 aa17.53■□□□□ 0.4
CXXC1-214ENST00000590901 ZBTB7AO95365 584 aa17.53■□□□□ 0.4
CXXC1-214ENST00000590901 NOSTRINQ8IVI9 506 aa17.53■□□□□ 0.4
CXXC1-214ENST00000590901 ZNF444Q8N0Y2 327 aaPredicted RBP17.53■□□□□ 0.4
CXXC1-214ENST00000590901 GPKOWQ92917 476 aaPredicted RBP eCLIP17.53■□□□□ 0.48e-6■■■□□ 18.6
CXXC1-214ENST00000590901 ANKZF1Q9H8Y5 726 aa17.53■□□□□ 0.4
CXXC1-214ENST00000590901 CABP5Q9NP86 173 aa17.53■□□□□ 0.4
CXXC1-214ENST00000590901 RAB21Q9UL25 225 aa17.53■□□□□ 0.4
CXXC1-214ENST00000590901 ROBO3Q96MS0 1386 aa17.53■□□□□ 0.4
CXXC1-214ENST00000590901 TTC31Q49AM3 519 aaPredicted RBP17.52■□□□□ 0.4
CXXC1-214ENST00000590901 DACT2Q5SW24 774 aa17.52■□□□□ 0.4
CXXC1-214ENST00000590901 SPECC1LQ69YQ0 1117 aa17.52■□□□□ 0.4
CXXC1-214ENST00000590901 STYK1Q6J9G0 422 aa17.52■□□□□ 0.4
CXXC1-214ENST00000590901 C16orf86Q6ZW13 317 aa17.52■□□□□ 0.4
CXXC1-214ENST00000590901 CEP112Q8N8E3 955 aa17.52■□□□□ 0.4
CXXC1-214ENST00000590901 CEP95Q96GE4 821 aa17.52■□□□□ 0.4
CXXC1-214ENST00000590901 EYA3Q99504 573 aa17.52■□□□□ 0.4
CXXC1-214ENST00000590901 DESI2Q9BSY9 194 aa17.52■□□□□ 0.4
CXXC1-214ENST00000590901 COL4A5P29400 1685 aa17.52■□□□□ 0.39
CXXC1-214ENST00000590901 ADKP55263 362 aaKnown RBP17.52■□□□□ 0.39
CXXC1-214ENST00000590901 TRIM29Q14134 588 aa17.52■□□□□ 0.39
CXXC1-214ENST00000590901 SHC4Q6S5L8 630 aa17.52■□□□□ 0.39
CXXC1-214ENST00000590901 MSANTD4Q8NCY6 345 aa17.52■□□□□ 0.39
CXXC1-214ENST00000590901 PCP11498 1178 aaKnown RBP17.51■□□□□ 0.39
CXXC1-214ENST00000590901 DPEP1P16444 411 aa17.51■□□□□ 0.39
CXXC1-214ENST00000590901 RNF26Q9BY78 433 aaPredicted RBP17.51■□□□□ 0.39
CXXC1-214ENST00000590901 MAD2L2Q9UI95 211 aa17.51■□□□□ 0.39
CXXC1-214ENST00000590901 FAN1Q9Y2M0 1017 aa17.51■□□□□ 0.39
CXXC1-214ENST00000590901 CCDC196A0A1B0GTZ2 297 aa17.51■□□□□ 0.39
CXXC1-214ENST00000590901 AKR1B1P15121 316 aa17.51■□□□□ 0.39
CXXC1-214ENST00000590901 CRKP46108 304 aa17.51■□□□□ 0.39
CXXC1-214ENST00000590901 USP17L2Q6R6M4 530 aa17.51■□□□□ 0.39
CXXC1-214ENST00000590901 JMYQ8N9B5 988 aa17.51■□□□□ 0.39
CXXC1-214ENST00000590901 KAT14Q9H8E8 782 aa17.51■□□□□ 0.39
CXXC1-214ENST00000590901 MRPL44Q9H9J2 332 aaKnown RBP17.51■□□□□ 0.39
CXXC1-214ENST00000590901 PRPF3O43395 683 aaKnown RBP17.5■□□□□ 0.39
CXXC1-214ENST00000590901 CCDC175P0C221 793 aa17.5■□□□□ 0.39
CXXC1-214ENST00000590901 USP49Q70CQ1 688 aa17.5■□□□□ 0.39
CXXC1-214ENST00000590901 ZBTB9Q96C00 473 aa17.5■□□□□ 0.39
CXXC1-214ENST00000590901 PUF60Q9UHX1 559 aaKnown RBP17.5■□□□□ 0.39
CXXC1-214ENST00000590901 CDC23Q9UJX2 597 aa17.5■□□□□ 0.39
CXXC1-214ENST00000590901 L1RE1Q9UN81 338 aa17.5■□□□□ 0.39
CXXC1-214ENST00000590901 ATF5Q9Y2D1 282 aaPredicted RBP17.5■□□□□ 0.39
CXXC1-214ENST00000590901 RGPD3A6NKT7 1758 aaPredicted RBP17.5■□□□□ 0.39
CXXC1-214ENST00000590901 RGPD4Q7Z3J3 1758 aa17.5■□□□□ 0.39
CXXC1-214ENST00000590901 FAM237AA0A1B0GTK4 181 aa17.5■□□□□ 0.39
CXXC1-214ENST00000590901 FOXR1Q6PIV2 292 aa17.5■□□□□ 0.39
CXXC1-214ENST00000590901 METTL16Q86W50 562 aaKnown RBP17.5■□□□□ 0.39
CXXC1-214ENST00000590901 RASGRP4Q8TDF6 673 aa17.5■□□□□ 0.39
CXXC1-214ENST00000590901 PNKPQ96T60 521 aa17.5■□□□□ 0.39
CXXC1-214ENST00000590901 PHF20Q9BVI0 1012 aa17.5■□□□□ 0.39
CXXC1-214ENST00000590901 DNAJC18Q9H819 358 aa17.5■□□□□ 0.39
CXXC1-214ENST00000590901 DDTLA6NHG4 134 aaPredicted RBP17.49■□□□□ 0.39
CXXC1-214ENST00000590901 EIF3CLB5ME19 914 aaKnown RBP17.49■□□□□ 0.39
CXXC1-214ENST00000590901 N4BP1O75113 896 aaKnown RBP17.49■□□□□ 0.39
CXXC1-214ENST00000590901 PPP6R2O75170 966 aa17.49■□□□□ 0.39
CXXC1-214ENST00000590901 DDAH1O94760 285 aa17.49■□□□□ 0.39
CXXC1-214ENST00000590901 TUBB4BP68371 445 aa17.49■□□□□ 0.39
CXXC1-214ENST00000590901 SH3BP5LQ7L8J4 393 aa17.49■□□□□ 0.39
CXXC1-214ENST00000590901 PODNQ7Z5L7 613 aa17.49■□□□□ 0.39
CXXC1-214ENST00000590901 CTCFLQ8NI51 663 aaPredicted RBP17.49■□□□□ 0.39
CXXC1-214ENST00000590901 EIF3CQ99613 913 aaKnown RBP17.49■□□□□ 0.39
CXXC1-214ENST00000590901 ZNF277Q9NRM2 450 aaPredicted RBP17.49■□□□□ 0.39
CXXC1-214ENST00000590901 SCAF8Q9UPN6 1271 aaKnown RBP17.49■□□□□ 0.39
CXXC1-214ENST00000590901 ZNF646O15015 1829 aaPredicted RBP17.49■□□□□ 0.39
CXXC1-214ENST00000590901 RBM5P52756 815 aaKnown RBP eCLIP17.49■□□□□ 0.39
CXXC1-214ENST00000590901 GABPAQ06546 454 aa17.49■□□□□ 0.39
CXXC1-214ENST00000590901 TUBB2AQ13885 445 aa17.49■□□□□ 0.39
CXXC1-214ENST00000590901 TUBB2BQ9BVA1 445 aa17.49■□□□□ 0.39
CXXC1-214ENST00000590901 IRX2Q9BZI1 471 aaPredicted RBP17.49■□□□□ 0.39
CXXC1-214ENST00000590901 BRMS1Q9HCU9 246 aa17.49■□□□□ 0.39
CXXC1-214ENST00000590901 ABCB6Q9NP58 842 aa17.49■□□□□ 0.39
CXXC1-214ENST00000590901 FOCADQ5VW36 1801 aa17.49■□□□□ 0.39
CXXC1-214ENST00000590901 RCAN1P53805 252 aa17.48■□□□□ 0.39
CXXC1-214ENST00000590901 HSP90AA4PQ58FG1 418 aa17.48■□□□□ 0.39
CXXC1-214ENST00000590901 RESP18Q5W5W9 173 aa17.48■□□□□ 0.39
CXXC1-214ENST00000590901 PACS2Q86VP3 889 aa17.48■□□□□ 0.39
CXXC1-214ENST00000590901 DGKHQ86XP1 1220 aa17.48■□□□□ 0.39
CXXC1-214ENST00000590901 FAM71BQ8TC56 605 aa17.48■□□□□ 0.39
CXXC1-214ENST00000590901 ZBTB12Q9Y330 459 aaPredicted RBP17.48■□□□□ 0.39
CXXC1-214ENST00000590901 PCDHA5Q9Y5H7 936 aa17.48■□□□□ 0.39
CXXC1-214ENST00000590901 RAD17O75943 681 aa17.48■□□□□ 0.39
CXXC1-214ENST00000590901 HSP90B2PQ58FF3 399 aa17.48■□□□□ 0.39
CXXC1-214ENST00000590901 LRRC47Q8N1G4 583 aaKnown RBP17.48■□□□□ 0.39
CXXC1-214ENST00000590901 UBA5Q9GZZ9 404 aa17.48■□□□□ 0.39
CXXC1-214ENST00000590901 GBP3Q9H0R5 595 aa17.48■□□□□ 0.39
CXXC1-214ENST00000590901 TMX4Q9H1E5 349 aaPredicted RBP17.48■□□□□ 0.39
CXXC1-214ENST00000590901 GEMIN8Q9NWZ8 242 aaKnown RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 153.9 ms