RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 CALM2P0DP24 149 aa24.82■■□□□ 1.56
ATG4D-212ENST00000590096 CALM3P0DP25 149 aa24.82■■□□□ 1.56
ATG4D-212ENST00000590096 RGS2P41220 211 aa24.82■■□□□ 1.56
ATG4D-212ENST00000590096 ANAPC15P60006 121 aa24.82■■□□□ 1.56
ATG4D-212ENST00000590096 GRB14Q14449 540 aa24.82■■□□□ 1.56
ATG4D-212ENST00000590096 MORN1Q5T089 497 aa24.82■■□□□ 1.56
ATG4D-212ENST00000590096 MYL10Q9BUA6 226 aa24.82■■□□□ 1.56
ATG4D-212ENST00000590096 CPVLQ9H3G5 476 aa24.82■■□□□ 1.56
ATG4D-212ENST00000590096 CYP46A1Q9Y6A2 500 aa24.82■■□□□ 1.56
ATG4D-212ENST00000590096 ZNF536O15090 1300 aa24.82■■□□□ 1.56
ATG4D-212ENST00000590096 ADCY3O60266 1144 aa24.81■■□□□ 1.56
ATG4D-212ENST00000590096 ICAM1P05362 532 aa24.81■■□□□ 1.56
ATG4D-212ENST00000590096 FCER1AP12319 257 aa24.81■■□□□ 1.56
ATG4D-212ENST00000590096 CYP2B6P20813 491 aa24.81■■□□□ 1.56
ATG4D-212ENST00000590096 KIF5BP33176 963 aa24.81■■□□□ 1.56
ATG4D-212ENST00000590096 MAP2K5Q13163 448 aa24.81■■□□□ 1.56
ATG4D-212ENST00000590096 TKFCQ3LXA3 575 aa24.81■■□□□ 1.56
ATG4D-212ENST00000590096 Q6ZUG5 572 aa24.81■■□□□ 1.56
ATG4D-212ENST00000590096 RUFY3Q7L099 469 aa24.81■■□□□ 1.56
ATG4D-212ENST00000590096 NBPF11Q86T75 865 aa24.81■■□□□ 1.56
ATG4D-212ENST00000590096 ADGRF4Q8IZF3 695 aa24.81■■□□□ 1.56
ATG4D-212ENST00000590096 SLAIN1Q8ND83 568 aa24.81■■□□□ 1.56
ATG4D-212ENST00000590096 CHST13Q8NET6 341 aa24.81■■□□□ 1.56
ATG4D-212ENST00000590096 AGBL1Q96MI9 1066 aa24.81■■□□□ 1.56
ATG4D-212ENST00000590096 MMP19Q99542 508 aa24.81■■□□□ 1.56
ATG4D-212ENST00000590096 TM6SF1Q9BZW5 370 aa24.81■■□□□ 1.56
ATG4D-212ENST00000590096 FBXO40Q9UH90 709 aa24.81■■□□□ 1.56
ATG4D-212ENST00000590096 PNMA2Q9UL42 364 aa24.81■■□□□ 1.56
ATG4D-212ENST00000590096 CCPG1Q9ULG6 757 aa24.81■■□□□ 1.56
ATG4D-212ENST00000590096 RIPK3Q9Y572 518 aa24.81■■□□□ 1.56
ATG4D-212ENST00000590096 GRK4P32298 578 aa24.8■■□□□ 1.56
ATG4D-212ENST00000590096 KCTD2Q14681 263 aa24.8■■□□□ 1.56
ATG4D-212ENST00000590096 ABRAQ8N0Z2 381 aa24.8■■□□□ 1.56
ATG4D-212ENST00000590096 ZSWIM6Q9HCJ5 1215 aa24.8■■□□□ 1.56
ATG4D-212ENST00000590096 HOMER2Q9NSB8 354 aa24.8■■□□□ 1.56
ATG4D-212ENST00000590096 ALAS1P13196 640 aa24.79■■□□□ 1.56
ATG4D-212ENST00000590096 ADORA2AP29274 412 aa24.79■■□□□ 1.56
ATG4D-212ENST00000590096 CDC37Q16543 378 aaPredicted RBP24.79■■□□□ 1.56
ATG4D-212ENST00000590096 DPP9Q86TI2 863 aa24.79■■□□□ 1.56
ATG4D-212ENST00000590096 MICU3Q86XE3 530 aa24.79■■□□□ 1.56
ATG4D-212ENST00000590096 PXYLP1Q8TE99 480 aa24.79■■□□□ 1.56
ATG4D-212ENST00000590096 USP6NLQ92738 828 aa24.79■■□□□ 1.56
ATG4D-212ENST00000590096 APBA2Q99767 749 aa24.79■■□□□ 1.56
ATG4D-212ENST00000590096 VAT1LQ9HCJ6 419 aa24.79■■□□□ 1.56
ATG4D-212ENST00000590096 SLC5A4Q9NY91 659 aa24.79■■□□□ 1.56
ATG4D-212ENST00000590096 ZNF236Q9UL36 1845 aa24.79■■□□□ 1.56
ATG4D-212ENST00000590096 XRCC5P13010 732 aaKnown RBP24.78■■□□□ 1.56
ATG4D-212ENST00000590096 RXRAP19793 462 aa24.78■■□□□ 1.56
ATG4D-212ENST00000590096 GNAQP50148 359 aa24.78■■□□□ 1.56
ATG4D-212ENST00000590096 APOA5Q6Q788 366 aa24.78■■□□□ 1.56
ATG4D-212ENST00000590096 TRERF1Q96PN7 1200 aa24.78■■□□□ 1.56
ATG4D-212ENST00000590096 ACAD9Q9H845 621 aa24.78■■□□□ 1.56
ATG4D-212ENST00000590096 JMJD4Q9H9V9 463 aa24.78■■□□□ 1.56
ATG4D-212ENST00000590096 RNF146Q9NTX7 359 aa24.78■■□□□ 1.56
ATG4D-212ENST00000590096 BIN2Q9UBW5 565 aaPredicted RBP24.78■■□□□ 1.56
ATG4D-212ENST00000590096 NAP1L2Q9ULW6 460 aaPredicted RBP24.78■■□□□ 1.56
ATG4D-212ENST00000590096 KLF18A0A0U1RQI7 1052 aa24.77■■□□□ 1.56
ATG4D-212ENST00000590096 ELNP15502 786 aa24.77■■□□□ 1.56
ATG4D-212ENST00000590096 RAB11FIP4Q86YS3 637 aa24.77■■□□□ 1.56
ATG4D-212ENST00000590096 CCDC144CPQ8IYA2 1237 aa24.77■■□□□ 1.56
ATG4D-212ENST00000590096 TRMT44Q8IYL2 757 aaKnown RBP24.77■■□□□ 1.56
ATG4D-212ENST00000590096 SH3TC2Q8TF17 1288 aa24.77■■□□□ 1.56
ATG4D-212ENST00000590096 BRF1Q92994 677 aa24.77■■□□□ 1.56
ATG4D-212ENST00000590096 UPF3BQ9BZI7 483 aaKnown RBP24.77■■□□□ 1.56
ATG4D-212ENST00000590096 ZBTB43O43298 467 aa24.76■■□□□ 1.55
ATG4D-212ENST00000590096 ANKRD35Q8N283 1001 aa24.76■■□□□ 1.55
ATG4D-212ENST00000590096 FBXL16Q8N461 479 aa24.76■■□□□ 1.55
ATG4D-212ENST00000590096 FANCBQ8NB91 859 aa24.76■■□□□ 1.55
ATG4D-212ENST00000590096 ARMC5Q96C12 935 aa24.76■■□□□ 1.55
ATG4D-212ENST00000590096 LZTS2Q9BRK4 669 aa24.76■■□□□ 1.55
ATG4D-212ENST00000590096 BRPF3Q9ULD4 1205 aa24.76■■□□□ 1.55
ATG4D-212ENST00000590096 MYH6P13533 1939 aa24.76■■□□□ 1.55
ATG4D-212ENST00000590096 ZNFX1Q9P2E3 1918 aaKnown RBP24.76■■□□□ 1.55
ATG4D-212ENST00000590096 HOXC6P09630 235 aa24.75■■□□□ 1.55
ATG4D-212ENST00000590096 UBXN2AP68543 259 aa24.75■■□□□ 1.55
ATG4D-212ENST00000590096 APOBRQ0VD83 1088 aa24.75■■□□□ 1.55
ATG4D-212ENST00000590096 DHX30Q7L2E3 1194 aaKnown RBP eCLIP24.75■■□□□ 1.551e-7■■■■■ 46
ATG4D-212ENST00000590096 DDX11Q96FC9 970 aa24.75■■□□□ 1.55
ATG4D-212ENST00000590096 RIOX1Q9H6W3 641 aa24.75■■□□□ 1.55
ATG4D-212ENST00000590096 RBM28Q9NW13 759 aaKnown RBP24.75■■□□□ 1.55
ATG4D-212ENST00000590096 HMGCRP04035 888 aa24.74■■□□□ 1.55
ATG4D-212ENST00000590096 RCAN1P53805 252 aa24.74■■□□□ 1.55
ATG4D-212ENST00000590096 MLLT1Q03111 559 aaPredicted RBP24.74■■□□□ 1.55
ATG4D-212ENST00000590096 QRICH1Q2TAL8 776 aa24.74■■□□□ 1.55
ATG4D-212ENST00000590096 USH1GQ495M9 461 aa24.74■■□□□ 1.55
ATG4D-212ENST00000590096 HOMER1Q86YM7 354 aa24.74■■□□□ 1.55
ATG4D-212ENST00000590096 AGXT2Q9BYV1 514 aa24.74■■□□□ 1.55
ATG4D-212ENST00000590096 UPF2Q9HAU5 1272 aaKnown RBP24.74■■□□□ 1.55
ATG4D-212ENST00000590096 PDRG1Q9NUG6 133 aa24.74■■□□□ 1.55
ATG4D-212ENST00000590096 GOLGA8AA7E2F4 631 aa24.73■■□□□ 1.55
ATG4D-212ENST00000590096 GOLGA8BA8MQT2 603 aa24.73■■□□□ 1.55
ATG4D-212ENST00000590096 ZBTB5O15062 677 aa24.73■■□□□ 1.55
ATG4D-212ENST00000590096 COBLO75128 1261 aa24.73■■□□□ 1.55
ATG4D-212ENST00000590096 TAL1P17542 331 aaPredicted RBP24.73■■□□□ 1.55
ATG4D-212ENST00000590096 RTN1Q16799 776 aa24.73■■□□□ 1.55
ATG4D-212ENST00000590096 FBXO11Q86XK2 927 aa24.73■■□□□ 1.55
ATG4D-212ENST00000590096 TRIB2Q92519 343 aa24.73■■□□□ 1.55
ATG4D-212ENST00000590096 ZNF333Q96JL9 665 aa24.73■■□□□ 1.55
ATG4D-212ENST00000590096 SPZ1Q9BXG8 430 aa24.73■■□□□ 1.55
ATG4D-212ENST00000590096 HTTP42858 3142 aa24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms