RNA–Protein interactions for RNA: ENST00000589599.5

H3F3B-208, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 3 BASIC

Gene H3F3B, Length 576 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-208ENST00000589599 CYB5R4Q7L1T6 521 aa19.8■□□□□ 0.76
H3F3B-208ENST00000589599 MAML3Q96JK9 1138 aa19.8■□□□□ 0.76
H3F3B-208ENST00000589599 HOMER2Q9NSB8 354 aa19.8■□□□□ 0.76
H3F3B-208ENST00000589599 BRCA2P51587 3418 aa19.79■□□□□ 0.76
H3F3B-208ENST00000589599 PARP14Q460N5 1801 aa19.79■□□□□ 0.76
H3F3B-208ENST00000589599 IFIT3O14879 490 aaKnown RBP19.79■□□□□ 0.76
H3F3B-208ENST00000589599 ALAS1P13196 640 aa19.79■□□□□ 0.76
H3F3B-208ENST00000589599 CNGA1P29973 690 aa19.79■□□□□ 0.76
H3F3B-208ENST00000589599 CCND3P30281 292 aaPredicted RBP19.79■□□□□ 0.76
H3F3B-208ENST00000589599 TRERF1Q96PN7 1200 aa19.79■□□□□ 0.76
H3F3B-208ENST00000589599 RANBP17Q9H2T7 1088 aaKnown RBP19.79■□□□□ 0.76
H3F3B-208ENST00000589599 ACAD9Q9H845 621 aa19.79■□□□□ 0.76
H3F3B-208ENST00000589599 RNF146Q9NTX7 359 aa19.79■□□□□ 0.76
H3F3B-208ENST00000589599 CCPG1Q9ULG6 757 aa19.79■□□□□ 0.76
H3F3B-208ENST00000589599 ZNF536O15090 1300 aa19.78■□□□□ 0.76
H3F3B-208ENST00000589599 FARP2O94887 1054 aaPredicted RBP19.78■□□□□ 0.76
H3F3B-208ENST00000589599 ICAM1P05362 532 aa19.78■□□□□ 0.76
H3F3B-208ENST00000589599 PARP1P09874 1014 aaKnown RBP19.78■□□□□ 0.76
H3F3B-208ENST00000589599 GOLGA8HP0CJ92 632 aa19.78■□□□□ 0.76
H3F3B-208ENST00000589599 SEC23AQ15436 765 aa19.78■□□□□ 0.76
H3F3B-208ENST00000589599 ASPRV1Q53RT3 343 aa19.78■□□□□ 0.76
H3F3B-208ENST00000589599 RNF20Q5VTR2 975 aa19.78■□□□□ 0.76
H3F3B-208ENST00000589599 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.78■□□□□ 0.76
H3F3B-208ENST00000589599 ANKLE1Q8NAG6 615 aa19.78■□□□□ 0.76
H3F3B-208ENST00000589599 TAF6LQ9Y6J9 622 aa19.78■□□□□ 0.76
H3F3B-208ENST00000589599 SLC27A2O14975 620 aa19.77■□□□□ 0.76
H3F3B-208ENST00000589599 MSCO60682 206 aa19.77■□□□□ 0.76
H3F3B-208ENST00000589599 IGHA2P01877 340 aa19.77■□□□□ 0.76
H3F3B-208ENST00000589599 CREB3L3Q68CJ9 461 aa19.77■□□□□ 0.76
H3F3B-208ENST00000589599 STOX1Q6ZVD7 989 aa19.77■□□□□ 0.76
H3F3B-208ENST00000589599 TINF2Q9BSI4 451 aa19.77■□□□□ 0.76
H3F3B-208ENST00000589599 ZNF236Q9UL36 1845 aa19.76■□□□□ 0.75
H3F3B-208ENST00000589599 TNRC18O15417 2968 aaPredicted RBP19.76■□□□□ 0.75
H3F3B-208ENST00000589599 DNAJC25-GNG10A0A024R161 153 aa19.76■□□□□ 0.75
H3F3B-208ENST00000589599 WTAPQ15007 396 aa19.76■□□□□ 0.75
H3F3B-208ENST00000589599 NECTIN1Q15223 517 aa19.76■□□□□ 0.75
H3F3B-208ENST00000589599 TMEM67Q5HYA8 995 aa19.76■□□□□ 0.75
H3F3B-208ENST00000589599 MSL3Q8N5Y2 521 aaKnown RBP19.76■□□□□ 0.75
H3F3B-208ENST00000589599 NRBP1Q9UHY1 535 aa19.76■□□□□ 0.75
H3F3B-208ENST00000589599 OGDHLQ9ULD0 1010 aa19.76■□□□□ 0.75
H3F3B-208ENST00000589599 COL11A1P12107 1806 aaPredicted RBP19.76■□□□□ 0.75
H3F3B-208ENST00000589599 POTEB2H3BUK9 544 aa19.75■□□□□ 0.75
H3F3B-208ENST00000589599 CHST3Q7LGC8 479 aa19.75■□□□□ 0.75
H3F3B-208ENST00000589599 ZNF467Q7Z7K2 595 aaPredicted RBP19.75■□□□□ 0.75
H3F3B-208ENST00000589599 HTATIP2Q9BUP3 242 aa19.75■□□□□ 0.75
H3F3B-208ENST00000589599 UBA5Q9GZZ9 404 aa19.75■□□□□ 0.75
H3F3B-208ENST00000589599 DDX20Q9UHI6 824 aaKnown RBP19.75■□□□□ 0.75
H3F3B-208ENST00000589599 CNPY2Q9Y2B0 182 aa19.75■□□□□ 0.75
H3F3B-208ENST00000589599 PFASO15067 1338 aa19.75■□□□□ 0.75
H3F3B-208ENST00000589599 DHX16O60231 1041 aaKnown RBP19.74■□□□□ 0.75
H3F3B-208ENST00000589599 CYBAP13498 195 aa19.74■□□□□ 0.75
H3F3B-208ENST00000589599 MCM5P33992 734 aa19.74■□□□□ 0.75
H3F3B-208ENST00000589599 PRAMEF19Q5SWL8 479 aa19.74■□□□□ 0.75
H3F3B-208ENST00000589599 LHX8Q68G74 356 aa19.74■□□□□ 0.75
H3F3B-208ENST00000589599 NECAB2Q7Z6G3 386 aa19.74■□□□□ 0.75
H3F3B-208ENST00000589599 UBE2Q1Q7Z7E8 422 aa19.74■□□□□ 0.75
H3F3B-208ENST00000589599 MB21D2Q8IYB1 491 aaPredicted RBP19.74■□□□□ 0.75
H3F3B-208ENST00000589599 TRPV1Q8NER1 839 aa19.74■□□□□ 0.75
H3F3B-208ENST00000589599 A1CFQ9NQ94 594 aaKnown RBP19.74■□□□□ 0.75
H3F3B-208ENST00000589599 SEPT4O43236 478 aa19.73■□□□□ 0.75
H3F3B-208ENST00000589599 CATIPQ7Z7H3 387 aa19.73■□□□□ 0.75
H3F3B-208ENST00000589599 PAWRQ96IZ0 340 aaKnown RBP19.73■□□□□ 0.75
H3F3B-208ENST00000589599 MTA3Q9BTC8 594 aa19.73■□□□□ 0.75
H3F3B-208ENST00000589599 WDR19Q8NEZ3 1342 aa19.73■□□□□ 0.75
H3F3B-208ENST00000589599 MKI67P46013 3256 aaKnown RBP19.72■□□□□ 0.75
H3F3B-208ENST00000589599 PRC1O43663 620 aa19.72■□□□□ 0.75
H3F3B-208ENST00000589599 MUM1L1Q5H9M0 696 aa19.72■□□□□ 0.75
H3F3B-208ENST00000589599 MAMDC4Q6UXC1 1216 aa19.72■□□□□ 0.75
H3F3B-208ENST00000589599 NSMFQ6X4W1 530 aa19.72■□□□□ 0.75
H3F3B-208ENST00000589599 ADGRF4Q8IZF3 695 aa19.72■□□□□ 0.75
H3F3B-208ENST00000589599 TMTC2Q8N394 836 aa19.72■□□□□ 0.75
H3F3B-208ENST00000589599 IGDCC4Q8TDY8 1250 aa19.72■□□□□ 0.75
H3F3B-208ENST00000589599 DPF3Q92784 378 aa19.72■□□□□ 0.75
H3F3B-208ENST00000589599 CPVLQ9H3G5 476 aa19.72■□□□□ 0.75
H3F3B-208ENST00000589599 VAT1LQ9HCJ6 419 aa19.72■□□□□ 0.75
H3F3B-208ENST00000589599 SYNGAP1Q96PV0 1343 aa19.72■□□□□ 0.75
H3F3B-208ENST00000589599 KLRF2D3W0D1 207 aa19.71■□□□□ 0.75
H3F3B-208ENST00000589599 ANTXR2P58335 489 aa19.71■□□□□ 0.75
H3F3B-208ENST00000589599 FAM133AQ8N9E0 248 aa19.71■□□□□ 0.75
H3F3B-208ENST00000589599 TMEM87BQ96K49 555 aa19.71■□□□□ 0.75
H3F3B-208ENST00000589599 CYP39A1Q9NYL5 469 aa19.71■□□□□ 0.75
H3F3B-208ENST00000589599 PALM3A6NDB9 673 aaPredicted RBP19.7■□□□□ 0.74
H3F3B-208ENST00000589599 REC8O95072 547 aa19.7■□□□□ 0.74
H3F3B-208ENST00000589599 CNTN2Q02246 1040 aa19.7■□□□□ 0.74
H3F3B-208ENST00000589599 KRT32Q14532 448 aa19.7■□□□□ 0.74
H3F3B-208ENST00000589599 GRM4Q14833 912 aa19.7■□□□□ 0.74
H3F3B-208ENST00000589599 CDC37Q16543 378 aaPredicted RBP19.7■□□□□ 0.74
H3F3B-208ENST00000589599 NFXL1Q6ZNB6 911 aa19.7■□□□□ 0.74
H3F3B-208ENST00000589599 ARRDC4Q8NCT1 418 aa19.7■□□□□ 0.74
H3F3B-208ENST00000589599 C11orf49Q9H6J7 331 aa19.7■□□□□ 0.74
H3F3B-208ENST00000589599 ASB14A6NK59 587 aa19.69■□□□□ 0.74
H3F3B-208ENST00000589599 SNAI1O95863 264 aaPredicted RBP19.69■□□□□ 0.74
H3F3B-208ENST00000589599 USH1GQ495M9 461 aa19.69■□□□□ 0.74
H3F3B-208ENST00000589599 PRPF38BQ5VTL8 546 aaKnown RBP19.69■□□□□ 0.74
H3F3B-208ENST00000589599 STAG2Q8N3U4 1231 aa19.69■□□□□ 0.74
H3F3B-208ENST00000589599 DIS3LQ8TF46 1054 aaKnown RBP19.69■□□□□ 0.74
H3F3B-208ENST00000589599 NEK1Q96PY6 1258 aa19.69■□□□□ 0.74
H3F3B-208ENST00000589599 JMJD4Q9H9V9 463 aa19.69■□□□□ 0.74
H3F3B-208ENST00000589599 LY9Q9HBG7 655 aa19.69■□□□□ 0.74
H3F3B-208ENST00000589599 SENP2Q9HC62 589 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms