RNA–Protein interactions for RNA: ENST00000588781.1

SPIDR-228, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 164 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-228ENST00000588781 MCTP2Q6DN12 878 aa8.06□□□□□ -1.12
SPIDR-228ENST00000588781 TRIM65Q6PJ69 517 aa8.06□□□□□ -1.12
SPIDR-228ENST00000588781 USP49Q70CQ1 688 aa8.06□□□□□ -1.12
SPIDR-228ENST00000588781 TMEM139Q8IV31 216 aa8.06□□□□□ -1.12
SPIDR-228ENST00000588781 GRAMD1CQ8IYS0 662 aa8.06□□□□□ -1.12
SPIDR-228ENST00000588781 PROM2Q8N271 834 aa8.06□□□□□ -1.12
SPIDR-228ENST00000588781 EHBP1Q8NDI1 1231 aa8.06□□□□□ -1.12
SPIDR-228ENST00000588781 SH3RF3Q8TEJ3 882 aaPredicted RBP8.06□□□□□ -1.12
SPIDR-228ENST00000588781 TGFBRAP1Q8WUH2 860 aa8.06□□□□□ -1.12
SPIDR-228ENST00000588781 CRAMP1Q96RY5 1269 aa8.06□□□□□ -1.12
SPIDR-228ENST00000588781 TMEM47Q9BQJ4 181 aa8.06□□□□□ -1.12
SPIDR-228ENST00000588781 ZMYND12Q9H0C1 365 aa8.06□□□□□ -1.12
SPIDR-228ENST00000588781 CD209Q9NNX6 404 aa8.06□□□□□ -1.12
SPIDR-228ENST00000588781 EXOC1Q9NV70 894 aa8.06□□□□□ -1.12
SPIDR-228ENST00000588781 INTS13Q9NVM9 706 aa8.06□□□□□ -1.12
SPIDR-228ENST00000588781 PODXL2Q9NZ53 605 aa8.06□□□□□ -1.12
SPIDR-228ENST00000588781 STK17AQ9UEE5 414 aa8.06□□□□□ -1.12
SPIDR-228ENST00000588781 MAD2L2Q9UI95 211 aa8.06□□□□□ -1.12
SPIDR-228ENST00000588781 STX8Q9UNK0 236 aa8.06□□□□□ -1.12
SPIDR-228ENST00000588781 LY75O60449 1722 aa8.06□□□□□ -1.12
SPIDR-228ENST00000588781 FAM205AQ6ZU69 1335 aa8.05□□□□□ -1.12
SPIDR-228ENST00000588781 TNRC6CQ9HCJ0 1690 aaKnown RBP8.05□□□□□ -1.12
SPIDR-228ENST00000588781 hCG_1642624A0A1W2PR95 340 aa8.05□□□□□ -1.12
SPIDR-228ENST00000588781 M0R2N6 131 aa8.05□□□□□ -1.12
SPIDR-228ENST00000588781 RHOBTB3O94955 611 aa8.05□□□□□ -1.12
SPIDR-228ENST00000588781 H2AFXP16104 143 aaPredicted RBP8.05□□□□□ -1.12
SPIDR-228ENST00000588781 RASA1P20936 1047 aa8.05□□□□□ -1.12
SPIDR-228ENST00000588781 KLRK1P26718 216 aa8.05□□□□□ -1.12
SPIDR-228ENST00000588781 CDK8P49336 464 aa8.05□□□□□ -1.12
SPIDR-228ENST00000588781 DNM2P50570 870 aa8.05□□□□□ -1.12
SPIDR-228ENST00000588781 ADKP55263 362 aaKnown RBP8.05□□□□□ -1.12
SPIDR-228ENST00000588781 STX17P56962 302 aa8.05□□□□□ -1.12
SPIDR-228ENST00000588781 KRT83P78385 493 aa8.05□□□□□ -1.12
SPIDR-228ENST00000588781 MAP3K9P80192 1104 aa8.05□□□□□ -1.12
SPIDR-228ENST00000588781 CBX1P83916 185 aa8.05□□□□□ -1.12
SPIDR-228ENST00000588781 PPP2R3AQ06190 1150 aa8.05□□□□□ -1.12
SPIDR-228ENST00000588781 GPS2Q13227 327 aa8.05□□□□□ -1.12
SPIDR-228ENST00000588781 NFIXQ14938 502 aa8.05□□□□□ -1.12
SPIDR-228ENST00000588781 SEPT2Q15019 361 aa8.05□□□□□ -1.12
SPIDR-228ENST00000588781 CRY2Q49AN0 593 aa8.05□□□□□ -1.12
SPIDR-228ENST00000588781 COBLL1Q53SF7 1204 aa8.05□□□□□ -1.12
SPIDR-228ENST00000588781 TCP11X2Q5H9J9 407 aa8.05□□□□□ -1.12
SPIDR-228ENST00000588781 EARS2Q5JPH6 523 aaKnown RBP8.05□□□□□ -1.12
SPIDR-228ENST00000588781 TEX35Q5T0J7 233 aa8.05□□□□□ -1.12
SPIDR-228ENST00000588781 CNNM4Q6P4Q7 775 aa8.05□□□□□ -1.12
SPIDR-228ENST00000588781 RASGRP2Q7LDG7 609 aa8.05□□□□□ -1.12
SPIDR-228ENST00000588781 NEK8Q86SG6 692 aa8.05□□□□□ -1.12
SPIDR-228ENST00000588781 CABP7Q86V35 215 aa8.05□□□□□ -1.12
SPIDR-228ENST00000588781 ADSSL1Q8N142 457 aa8.05□□□□□ -1.12
SPIDR-228ENST00000588781 C4orf32Q8N8J7 132 aa8.05□□□□□ -1.12
SPIDR-228ENST00000588781 RABGGTAQ92696 567 aa8.05□□□□□ -1.12
SPIDR-228ENST00000588781 TRIM47Q96LD4 638 aa8.05□□□□□ -1.12
SPIDR-228ENST00000588781 NUP88Q99567 741 aaPredicted RBP8.05□□□□□ -1.12
SPIDR-228ENST00000588781 RTFDC1Q9BY42 306 aaPredicted RBP8.05□□□□□ -1.12
SPIDR-228ENST00000588781 MTFR1LQ9H019 292 aa8.05□□□□□ -1.12
SPIDR-228ENST00000588781 GBP3Q9H0R5 595 aa8.05□□□□□ -1.12
SPIDR-228ENST00000588781 PCDHA6Q9UN73 950 aa8.05□□□□□ -1.12
SPIDR-228ENST00000588781 PCDHA8Q9Y5H6 950 aa8.05□□□□□ -1.12
SPIDR-228ENST00000588781 STK24Q9Y6E0 443 aa8.05□□□□□ -1.12
SPIDR-228ENST00000588781 PLIN4Q96Q06 1357 aa8.05□□□□□ -1.12
SPIDR-228ENST00000588781 GAKO14976 1311 aa8.04□□□□□ -1.12
SPIDR-228ENST00000588781 A0A087X0B3 334 aa8.04□□□□□ -1.12
SPIDR-228ENST00000588781 CTAGE9A4FU28 777 aa8.04□□□□□ -1.12
SPIDR-228ENST00000588781 SMCO2A6NFE2 343 aa8.04□□□□□ -1.12
SPIDR-228ENST00000588781 LGALS16A8MUM7 142 aa8.04□□□□□ -1.12
SPIDR-228ENST00000588781 NMT2O60551 498 aa8.04□□□□□ -1.12
SPIDR-228ENST00000588781 ERLIN1O75477 346 aa8.04□□□□□ -1.12
SPIDR-228ENST00000588781 TADA3O75528 432 aa8.04□□□□□ -1.12
SPIDR-228ENST00000588781 KIF20AO95235 890 aa8.04□□□□□ -1.12
SPIDR-228ENST00000588781 HLA-DOAP06340 250 aa8.04□□□□□ -1.12
SPIDR-228ENST00000588781 HSPA6P17066 643 aa8.04□□□□□ -1.12
SPIDR-228ENST00000588781 CCNE1P24864 410 aa8.04□□□□□ -1.12
SPIDR-228ENST00000588781 MCM3P25205 808 aa8.04□□□□□ -1.12
SPIDR-228ENST00000588781 HOXA10P31260 410 aaPredicted RBP8.04□□□□□ -1.12
SPIDR-228ENST00000588781 CYLC1P35663 651 aaPredicted RBP8.04□□□□□ -1.12
SPIDR-228ENST00000588781 GPSM2P81274 684 aa8.04□□□□□ -1.12
SPIDR-228ENST00000588781 DMTNQ08495 405 aa8.04□□□□□ -1.12
SPIDR-228ENST00000588781 RBL2Q08999 1139 aa8.04□□□□□ -1.12
SPIDR-228ENST00000588781 PSMD2Q13200 908 aa8.04□□□□□ -1.12
SPIDR-228ENST00000588781 KRT31Q15323 416 aa8.04□□□□□ -1.12
SPIDR-228ENST00000588781 WHAMMP3Q1A5X7 153 aa8.04□□□□□ -1.12
SPIDR-228ENST00000588781 FKBP15Q5T1M5 1219 aa8.04□□□□□ -1.12
SPIDR-228ENST00000588781 FOXR2Q6PJQ5 311 aa8.04□□□□□ -1.12
SPIDR-228ENST00000588781 MAPKAPK5Q8IW41 473 aa8.04□□□□□ -1.12
SPIDR-228ENST00000588781 REXO1Q8N1G1 1221 aaKnown RBP8.04□□□□□ -1.12
SPIDR-228ENST00000588781 OR8K1Q8NGG5 319 aa8.04□□□□□ -1.12
SPIDR-228ENST00000588781 GPKOWQ92917 476 aaPredicted RBP eCLIP8.04□□□□□ -1.12
SPIDR-228ENST00000588781 SHISA4Q96DD7 197 aa8.04□□□□□ -1.12
SPIDR-228ENST00000588781 CDK5RAP3Q96JB5 506 aa8.04□□□□□ -1.12
SPIDR-228ENST00000588781 C7orf25Q9BPX7 421 aa8.04□□□□□ -1.12
SPIDR-228ENST00000588781 COA1Q9GZY4 146 aa8.04□□□□□ -1.12
SPIDR-228ENST00000588781 IL17RBQ9NRM6 502 aa8.04□□□□□ -1.12
SPIDR-228ENST00000588781 KBTBD4Q9NVX7 518 aa8.04□□□□□ -1.12
SPIDR-228ENST00000588781 LUC7L2Q9Y383 392 aaKnown RBP8.04□□□□□ -1.12
SPIDR-228ENST00000588781 MRFAP1Q9Y605 127 aa8.04□□□□□ -1.12
SPIDR-228ENST00000588781 ADGRG1Q9Y653 693 aa8.04□□□□□ -1.12
SPIDR-228ENST00000588781 PARP3Q9Y6F1 533 aa8.04□□□□□ -1.12
SPIDR-228ENST00000588781 COL4A1P02462 1669 aa8.04□□□□□ -1.12
SPIDR-228ENST00000588781 ABCB11O95342 1321 aa8.03□□□□□ -1.12
SPIDR-228ENST00000588781 FLT1P17948 1338 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms