RNA–Protein interactions for RNA: ENST00000587818.1

TRAPPC6A-203, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 2

Gene TRAPPC6A, Length 433 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-203ENST00000587818 SENP6Q9GZR1 1112 aaPredicted RBP23.58■■□□□ 1.37
TRAPPC6A-203ENST00000587818 RNF146Q9NTX7 359 aa23.58■■□□□ 1.37
TRAPPC6A-203ENST00000587818 ZSWIM5Q9P217 1185 aa23.58■■□□□ 1.37
TRAPPC6A-203ENST00000587818 PCDH10Q9P2E7 1040 aa23.58■■□□□ 1.37
TRAPPC6A-203ENST00000587818 FRMPD3Q5JV73 1810 aa23.58■■□□□ 1.37
TRAPPC6A-203ENST00000587818 MSCO60682 206 aa23.57■■□□□ 1.36
TRAPPC6A-203ENST00000587818 COL6A1P12109 1028 aa23.57■■□□□ 1.36
TRAPPC6A-203ENST00000587818 CNTN2Q02246 1040 aa23.57■■□□□ 1.36
TRAPPC6A-203ENST00000587818 CHRDL2Q6WN34 429 aa23.57■■□□□ 1.36
TRAPPC6A-203ENST00000587818 FBXO40Q9UH90 709 aa23.57■■□□□ 1.36
TRAPPC6A-203ENST00000587818 SNAI1O95863 264 aaPredicted RBP23.56■■□□□ 1.36
TRAPPC6A-203ENST00000587818 GOLGA8HP0CJ92 632 aa23.56■■□□□ 1.36
TRAPPC6A-203ENST00000587818 PDHBP11177 359 aa23.56■■□□□ 1.36
TRAPPC6A-203ENST00000587818 MUM1L1Q5H9M0 696 aa23.56■■□□□ 1.36
TRAPPC6A-203ENST00000587818 SYDE2Q5VT97 1194 aa23.56■■□□□ 1.36
TRAPPC6A-203ENST00000587818 RUFY2Q8WXA3 655 aa23.56■■□□□ 1.36
TRAPPC6A-203ENST00000587818 ZMYND8Q9ULU4 1186 aaPredicted RBP23.56■■□□□ 1.36
TRAPPC6A-203ENST00000587818 ZNF865P0CJ78 1059 aaPredicted RBP23.55■■□□□ 1.36
TRAPPC6A-203ENST00000587818 BTNL9Q6UXG8 535 aa23.55■■□□□ 1.36
TRAPPC6A-203ENST00000587818 DGKHQ86XP1 1220 aa23.55■■□□□ 1.36
TRAPPC6A-203ENST00000587818 FGD4Q96M96 766 aa23.55■■□□□ 1.36
TRAPPC6A-203ENST00000587818 CPVLQ9H3G5 476 aa23.55■■□□□ 1.36
TRAPPC6A-203ENST00000587818 ACAD9Q9H845 621 aa23.55■■□□□ 1.36
TRAPPC6A-203ENST00000587818 LAMA4Q16363 1823 aa23.54■■□□□ 1.36
TRAPPC6A-203ENST00000587818 ATN1P54259 1190 aaPredicted RBP23.54■■□□□ 1.36
TRAPPC6A-203ENST00000587818 ZNF543Q08ER8 600 aa23.54■■□□□ 1.36
TRAPPC6A-203ENST00000587818 LRRC26Q2I0M4 334 aa23.54■■□□□ 1.36
TRAPPC6A-203ENST00000587818 IQCA1Q86XH1 822 aa23.54■■□□□ 1.36
TRAPPC6A-203ENST00000587818 LENG1Q96BZ8 264 aaPredicted RBP23.54■■□□□ 1.36
TRAPPC6A-203ENST00000587818 ZSCAN10Q96SZ4 725 aaPredicted RBP23.54■■□□□ 1.36
TRAPPC6A-203ENST00000587818 UBA5Q9GZZ9 404 aa23.54■■□□□ 1.36
TRAPPC6A-203ENST00000587818 A1CFQ9NQ94 594 aaKnown RBP23.54■■□□□ 1.36
TRAPPC6A-203ENST00000587818 CCPG1Q9ULG6 757 aa23.54■■□□□ 1.36
TRAPPC6A-203ENST00000587818 SYN1P17600 705 aa23.53■■□□□ 1.36
TRAPPC6A-203ENST00000587818 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.53■■□□□ 1.36
TRAPPC6A-203ENST00000587818 ARRDC4Q8NCT1 418 aa23.53■■□□□ 1.36
TRAPPC6A-203ENST00000587818 KRT23Q9C075 422 aa23.53■■□□□ 1.36
TRAPPC6A-203ENST00000587818 RANBP17Q9H2T7 1088 aaKnown RBP23.53■■□□□ 1.36
TRAPPC6A-203ENST00000587818 ZHX1Q9UKY1 873 aaPredicted RBP23.53■■□□□ 1.36
TRAPPC6A-203ENST00000587818 CNPY2Q9Y2B0 182 aa23.53■■□□□ 1.36
TRAPPC6A-203ENST00000587818 TAF6LQ9Y6J9 622 aa23.53■■□□□ 1.36
TRAPPC6A-203ENST00000587818 RAD50Q92878 1312 aa23.53■■□□□ 1.36
TRAPPC6A-203ENST00000587818 MCM3APO60318 1980 aa23.52■■□□□ 1.36
TRAPPC6A-203ENST00000587818 SOWAHBA6NEL2 793 aa23.52■■□□□ 1.36
TRAPPC6A-203ENST00000587818 POTEB2H3BUK9 544 aa23.52■■□□□ 1.36
TRAPPC6A-203ENST00000587818 SGSM2O43147 1006 aa23.52■■□□□ 1.36
TRAPPC6A-203ENST00000587818 SNHG28P0DPA3 235 aa23.52■■□□□ 1.36
TRAPPC6A-203ENST00000587818 TKFCQ3LXA3 575 aa23.52■■□□□ 1.36
TRAPPC6A-203ENST00000587818 MAMDC4Q6UXC1 1216 aa23.52■■□□□ 1.36
TRAPPC6A-203ENST00000587818 CYB5R4Q7L1T6 521 aa23.52■■□□□ 1.36
TRAPPC6A-203ENST00000587818 ENAHQ8N8S7 591 aaPredicted RBP23.52■■□□□ 1.36
TRAPPC6A-203ENST00000587818 PNMA1Q8ND90 353 aa23.52■■□□□ 1.36
TRAPPC6A-203ENST00000587818 ANKS1AQ92625 1134 aa23.52■■□□□ 1.36
TRAPPC6A-203ENST00000587818 FERMT2Q96AC1 680 aa23.52■■□□□ 1.36
TRAPPC6A-203ENST00000587818 PURBQ96QR8 312 aaKnown RBP23.52■■□□□ 1.36
TRAPPC6A-203ENST00000587818 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.52■■□□□ 1.36
TRAPPC6A-203ENST00000587818 NRBP1Q9UHY1 535 aa23.52■■□□□ 1.36
TRAPPC6A-203ENST00000587818 DDX49Q9Y6V7 483 aaKnown RBP23.52■■□□□ 1.36
TRAPPC6A-203ENST00000587818 DNM1LO00429 736 aa23.51■■□□□ 1.35
TRAPPC6A-203ENST00000587818 PGK1P00558 417 aa23.51■■□□□ 1.35
TRAPPC6A-203ENST00000587818 ICAM1P05362 532 aa23.51■■□□□ 1.35
TRAPPC6A-203ENST00000587818 CYP21A2P08686 494 aa23.51■■□□□ 1.35
TRAPPC6A-203ENST00000587818 LRRC41Q15345 812 aa23.51■■□□□ 1.35
TRAPPC6A-203ENST00000587818 CCDC178Q5BJE1 867 aa23.51■■□□□ 1.35
TRAPPC6A-203ENST00000587818 NSMFQ6X4W1 530 aa23.51■■□□□ 1.35
TRAPPC6A-203ENST00000587818 FAM133AQ8N9E0 248 aa23.51■■□□□ 1.35
TRAPPC6A-203ENST00000587818 KAT14Q9H8E8 782 aa23.51■■□□□ 1.35
TRAPPC6A-203ENST00000587818 RBM27Q9P2N5 1060 aaKnown RBP23.51■■□□□ 1.35
TRAPPC6A-203ENST00000587818 TNKSO95271 1327 aa23.51■■□□□ 1.35
TRAPPC6A-203ENST00000587818 RARBP10826 455 aa23.5■■□□□ 1.35
TRAPPC6A-203ENST00000587818 ZNF467Q7Z7K2 595 aaPredicted RBP23.5■■□□□ 1.35
TRAPPC6A-203ENST00000587818 MSL3Q8N5Y2 521 aaKnown RBP23.5■■□□□ 1.35
TRAPPC6A-203ENST00000587818 CNNM2Q9H8M5 875 aa23.5■■□□□ 1.35
TRAPPC6A-203ENST00000587818 XPNPEP3Q9NQH7 507 aa23.5■■□□□ 1.35
TRAPPC6A-203ENST00000587818 U3KPZ7 1027 aaPredicted RBP23.5■■□□□ 1.35
TRAPPC6A-203ENST00000587818 KBTBD13C9JR72 458 aa23.49■■□□□ 1.35
TRAPPC6A-203ENST00000587818 ADCYAP1R1P41586 468 aa23.49■■□□□ 1.35
TRAPPC6A-203ENST00000587818 ACVR2BQ13705 512 aa23.49■■□□□ 1.35
TRAPPC6A-203ENST00000587818 CENPQQ7L2Z9 268 aaPredicted RBP23.49■■□□□ 1.35
TRAPPC6A-203ENST00000587818 ARMCX2Q7L311 632 aa23.49■■□□□ 1.35
TRAPPC6A-203ENST00000587818 CCDC144CPQ8IYA2 1237 aa23.49■■□□□ 1.35
TRAPPC6A-203ENST00000587818 UBAC1Q9BSL1 405 aa23.49■■□□□ 1.35
TRAPPC6A-203ENST00000587818 FAM184BQ9ULE4 1060 aa23.49■■□□□ 1.35
TRAPPC6A-203ENST00000587818 SYNGAP1Q96PV0 1343 aa23.49■■□□□ 1.35
TRAPPC6A-203ENST00000587818 AKR1A1P14550 325 aa23.48■■□□□ 1.35
TRAPPC6A-203ENST00000587818 IRX5P78411 483 aaPredicted RBP23.48■■□□□ 1.35
TRAPPC6A-203ENST00000587818 BAATQ14032 418 aaPredicted RBP23.48■■□□□ 1.35
TRAPPC6A-203ENST00000587818 VAT1LQ9HCJ6 419 aa23.48■■□□□ 1.35
TRAPPC6A-203ENST00000587818 CYP39A1Q9NYL5 469 aa23.48■■□□□ 1.35
TRAPPC6A-203ENST00000587818 NFIBO00712 420 aa23.47■■□□□ 1.35
TRAPPC6A-203ENST00000587818 STOX1Q6ZVD7 989 aa23.47■■□□□ 1.35
TRAPPC6A-203ENST00000587818 CHST3Q7LGC8 479 aa23.47■■□□□ 1.35
TRAPPC6A-203ENST00000587818 MAP4K1Q92918 833 aa23.47■■□□□ 1.35
TRAPPC6A-203ENST00000587818 E7EWF7 191 aa23.46■■□□□ 1.35
TRAPPC6A-203ENST00000587818 ASTN1O14525 1302 aa23.46■■□□□ 1.35
TRAPPC6A-203ENST00000587818 NT5C2P49902 561 aa23.46■■□□□ 1.35
TRAPPC6A-203ENST00000587818 TRDNQ13061 729 aa23.46■■□□□ 1.35
TRAPPC6A-203ENST00000587818 SEC23AQ15436 765 aa23.46■■□□□ 1.35
TRAPPC6A-203ENST00000587818 GPATCH4Q5T3I0 446 aaKnown RBP23.46■■□□□ 1.35
TRAPPC6A-203ENST00000587818 IFIT1BQ5T764 474 aaKnown RBP23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms