RNA–Protein interactions for RNA: ENST00000584445.5

NARF-225, Transcript of nuclear prelamin A recognition factor, human

TSL 2

Gene NARF, Length 2,484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NARF-225	ENST00000584445	PTGDR	Q13258	359 aa		13.44	□□□□□ -0.26
NARF-225	ENST00000584445	CCDC178	Q5BJE1	867 aa		13.44	□□□□□ -0.26
NARF-225	ENST00000584445	USP17L2	Q6R6M4	530 aa		13.44	□□□□□ -0.26
NARF-225	ENST00000584445	APTX	Q7Z2E3	356 aa	Known RBP	13.44	□□□□□ -0.26
NARF-225	ENST00000584445	SH3RF1	Q7Z6J0	888 aa		13.44	□□□□□ -0.26
NARF-225	ENST00000584445	C2CD5	Q86YS7	1000 aa		13.44	□□□□□ -0.26
NARF-225	ENST00000584445	GPR161	Q8N6U8	529 aa	Known RBP	13.44	□□□□□ -0.26
NARF-225	ENST00000584445	NAA15	Q9BXJ9	866 aa	Known RBP	13.44	□□□□□ -0.26
NARF-225	ENST00000584445	VAT1L	Q9HCJ6	419 aa		13.44	□□□□□ -0.26
NARF-225	ENST00000584445	DDX4	Q9NQI0	724 aa	Known RBP	13.44	□□□□□ -0.26
NARF-225	ENST00000584445	TCP11L1	Q9NUJ3	509 aa		13.44	□□□□□ -0.26
NARF-225	ENST00000584445		A0A087X0B3	334 aa		13.43	□□□□□ -0.26
NARF-225	ENST00000584445	CUL4B	Q13620	913 aa		13.43	□□□□□ -0.26
NARF-225	ENST00000584445	WWC2	Q6AWC2	1192 aa		13.43	□□□□□ -0.26
NARF-225	ENST00000584445	CLEC10A	Q8IUN9	316 aa		13.43	□□□□□ -0.26
NARF-225	ENST00000584445	SYMPK	Q92797	1274 aa	Known RBP	13.43	□□□□□ -0.26
NARF-225	ENST00000584445	PAGE5	Q96GU1	130 aa		13.43	□□□□□ -0.26
NARF-225	ENST00000584445	ZFP91	Q96JP5	570 aa	Predicted RBP	13.43	□□□□□ -0.26
NARF-225	ENST00000584445	GSDMA	Q96QA5	445 aa		13.43	□□□□□ -0.26
NARF-225	ENST00000584445	CTAGE1	Q96RT6	745 aa		13.43	□□□□□ -0.26
NARF-225	ENST00000584445	USP40	Q9NVE5	1235 aa		13.43	□□□□□ -0.26
NARF-225	ENST00000584445	KLRF2	D3W0D1	207 aa		13.42	□□□□□ -0.26
NARF-225	ENST00000584445	AFM	P43652	599 aa		13.42	□□□□□ -0.26
NARF-225	ENST00000584445	PLA2G4A	P47712	749 aa		13.42	□□□□□ -0.26
NARF-225	ENST00000584445	PPFIBP1	Q86W92	1011 aa		13.42	□□□□□ -0.26
NARF-225	ENST00000584445	BLID	Q8IZY5	108 aa		13.42	□□□□□ -0.26
NARF-225	ENST00000584445	NEDD1	Q8NHV4	660 aa		13.42	□□□□□ -0.26
NARF-225	ENST00000584445	DESI2	Q9BSY9	194 aa		13.42	□□□□□ -0.26
NARF-225	ENST00000584445	LTBP1	Q14766	1721 aa		13.42	□□□□□ -0.26
NARF-225	ENST00000584445	SLURP2	P0DP57	97 aa		13.42	□□□□□ -0.26
NARF-225	ENST00000584445	RXRB	P28702	533 aa		13.42	□□□□□ -0.26
NARF-225	ENST00000584445	CASP1	P29466	404 aa		13.42	□□□□□ -0.26
NARF-225	ENST00000584445	CHRNA5	P30532	468 aa		13.42	□□□□□ -0.26
NARF-225	ENST00000584445	GNAQ	P50148	359 aa		13.42	□□□□□ -0.26
NARF-225	ENST00000584445	CDKAL1	Q5VV42	579 aa		13.42	□□□□□ -0.26
NARF-225	ENST00000584445	RSRC2	Q7L4I2	434 aa	Known RBP	13.42	□□□□□ -0.26
NARF-225	ENST00000584445	IGSF22	Q8N9C0	903 aa		13.42	□□□□□ -0.26
NARF-225	ENST00000584445	FLAD1	Q8NFF5	587 aa		13.42	□□□□□ -0.26
NARF-225	ENST00000584445	ADD3	Q9UEY8	706 aa	Known RBP	13.42	□□□□□ -0.26
NARF-225	ENST00000584445	LRRC37A	A6NMS7	1700 aa		13.42	□□□□□ -0.26
NARF-225	ENST00000584445	DDX60L	Q5H9U9	1706 aa	Known RBP	13.42	□□□□□ -0.26
NARF-225	ENST00000584445	CDK5RAP2	Q96SN8	1893 aa		13.42	□□□□□ -0.26
NARF-225	ENST00000584445	TEX33	O43247	280 aa		13.41	□□□□□ -0.26
NARF-225	ENST00000584445	PARP1	P09874	1014 aa	Known RBP	13.41	□□□□□ -0.26
NARF-225	ENST00000584445	PBX1	P40424	430 aa		13.41	□□□□□ -0.26
NARF-225	ENST00000584445	DPYD	Q12882	1025 aa		13.41	□□□□□ -0.26
NARF-225	ENST00000584445	FILIP1L	Q4L180	1135 aa		13.41	□□□□□ -0.26
NARF-225	ENST00000584445	KLHL10	Q6JEL2	608 aa		13.41	□□□□□ -0.26
NARF-225	ENST00000584445	RABGGTA	Q92696	567 aa		13.41	□□□□□ -0.26
NARF-225	ENST00000584445	PCDHAC2	Q9Y5I4	1007 aa		13.41	□□□□□ -0.26
NARF-225	ENST00000584445	CCDC66	A2RUB6	948 aa		13.41	□□□□□ -0.26
NARF-225	ENST00000584445	PALM3	A6NDB9	673 aa	Predicted RBP	13.41	□□□□□ -0.26
NARF-225	ENST00000584445	USP17L5	A8MUK1	530 aa		13.41	□□□□□ -0.26
NARF-225	ENST00000584445	CD44	P16070	742 aa	Known RBP	13.41	□□□□□ -0.26
NARF-225	ENST00000584445	HMGB2	P26583	209 aa	Known RBP	13.41	□□□□□ -0.26
NARF-225	ENST00000584445	CALML3	P27482	149 aa		13.41	□□□□□ -0.26
NARF-225	ENST00000584445	CACNB3	P54284	484 aa		13.41	□□□□□ -0.26
NARF-225	ENST00000584445	KARS	Q15046	597 aa	Known RBP	13.41	□□□□□ -0.26
NARF-225	ENST00000584445	TEX35	Q5T0J7	233 aa		13.41	□□□□□ -0.26
NARF-225	ENST00000584445	KIAA0825	Q8IV33	1275 aa		13.41	□□□□□ -0.26
NARF-225	ENST00000584445	LRRC47	Q8N1G4	583 aa	Known RBP	13.41	□□□□□ -0.26
NARF-225	ENST00000584445	CCDC12	Q8WUD4	166 aa	Predicted RBP	13.41	□□□□□ -0.26
NARF-225	ENST00000584445	UBA5	Q9GZZ9	404 aa		13.41	□□□□□ -0.26
NARF-225	ENST00000584445	MRPL44	Q9H9J2	332 aa	Known RBP	13.41	□□□□□ -0.26
NARF-225	ENST00000584445	PCDHA4	Q9UN74	947 aa		13.41	□□□□□ -0.26
NARF-225	ENST00000584445	FRMPD2	Q68DX3	1309 aa	Predicted RBP	13.41	□□□□□ -0.26
NARF-225	ENST00000584445	SOWAHD	A6NJG2	315 aa		13.4	□□□□□ -0.26
NARF-225	ENST00000584445	AKR1B1	P15121	316 aa		13.4	□□□□□ -0.26
NARF-225	ENST00000584445	RBL2	Q08999	1139 aa		13.4	□□□□□ -0.26
NARF-225	ENST00000584445	MTF1	Q14872	753 aa		13.4	□□□□□ -0.26
NARF-225	ENST00000584445	CC2D1A	Q6P1N0	951 aa	Predicted RBP	13.4	□□□□□ -0.26
NARF-225	ENST00000584445	STAM	Q92783	540 aa		13.4	□□□□□ -0.26
NARF-225	ENST00000584445	GOLGA1	Q92805	767 aa		13.4	□□□□□ -0.26
NARF-225	ENST00000584445	ADGRG1	Q9Y653	693 aa		13.4	□□□□□ -0.26
NARF-225	ENST00000584445	CCDC194	A0A1B0GVG4	234 aa		13.4	□□□□□ -0.26
NARF-225	ENST00000584445		H0YIN7	160 aa		13.4	□□□□□ -0.26
NARF-225	ENST00000584445	STXBP3	O00186	592 aa		13.4	□□□□□ -0.26
NARF-225	ENST00000584445	COL11A2	P13942	1736 aa	Predicted RBP	13.4	□□□□□ -0.26
NARF-225	ENST00000584445	RBM5	P52756	815 aa	Known RBP eCLIP	13.4	□□□□□ -0.26
NARF-225	ENST00000584445	STX17	P56962	302 aa		13.4	□□□□□ -0.26
NARF-225	ENST00000584445	ATP2C1	P98194	919 aa	Predicted RBP	13.4	□□□□□ -0.26
NARF-225	ENST00000584445	CDC42EP5	Q6NZY7	148 aa		13.4	□□□□□ -0.26
NARF-225	ENST00000584445	CCDC51	Q96ER9	411 aa		13.4	□□□□□ -0.26
NARF-225	ENST00000584445	ITIH6	Q6UXX5	1313 aa		13.39	□□□□□ -0.27
NARF-225	ENST00000584445	PPP1R3G	B7ZBB8	358 aa		13.39	□□□□□ -0.27
NARF-225	ENST00000584445	MFAP3L	O75121	409 aa		13.39	□□□□□ -0.27
NARF-225	ENST00000584445	SEC31A	O94979	1220 aa	Known RBP	13.39	□□□□□ -0.27
NARF-225	ENST00000584445	CDC25A	P30304	524 aa		13.39	□□□□□ -0.27
NARF-225	ENST00000584445	NAPA	P54920	295 aa		13.39	□□□□□ -0.27
NARF-225	ENST00000584445	ATP2B2	Q01814	1243 aa		13.39	□□□□□ -0.27
NARF-225	ENST00000584445	NFIA	Q12857	509 aa		13.39	□□□□□ -0.27
NARF-225	ENST00000584445	IL17A	Q16552	155 aa		13.39	□□□□□ -0.27
NARF-225	ENST00000584445	INF2	Q27J81	1249 aa		13.39	□□□□□ -0.27
NARF-225	ENST00000584445	JAKMIP3	Q5VZ66	844 aa		13.39	□□□□□ -0.27
NARF-225	ENST00000584445	RAD9B	Q6WBX8	426 aa		13.39	□□□□□ -0.27
NARF-225	ENST00000584445	CNGA4	Q8IV77	575 aa		13.39	□□□□□ -0.27
NARF-225	ENST00000584445	TEKT1	Q969V4	418 aa		13.39	□□□□□ -0.27
NARF-225	ENST00000584445	PYM1	Q9BRP8	204 aa	Known RBP	13.39	□□□□□ -0.27
NARF-225	ENST00000584445	PCDHA6	Q9UN73	950 aa		13.39	□□□□□ -0.27
NARF-225	ENST00000584445	PCDHA8	Q9Y5H6	950 aa		13.39	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms