RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 KIAA0355O15063 1070 aa18.58■□□□□ 0.56
SKA2-209ENST00000583976 ZBED4O75132 1171 aa18.58■□□□□ 0.56
SKA2-209ENST00000583976 TSPY3P0CV98 308 aa18.58■□□□□ 0.56
SKA2-209ENST00000583976 TSPY8P0CW00 308 aa18.58■□□□□ 0.56
SKA2-209ENST00000583976 PTGS1P23219 599 aa18.58■□□□□ 0.56
SKA2-209ENST00000583976 PPARAQ07869 468 aa18.58■□□□□ 0.56
SKA2-209ENST00000583976 SLFN13Q68D06 897 aa18.58■□□□□ 0.56
SKA2-209ENST00000583976 CCSAPQ6IQ19 270 aaPredicted RBP18.58■□□□□ 0.56
SKA2-209ENST00000583976 MAMDC4Q6UXC1 1216 aa18.58■□□□□ 0.56
SKA2-209ENST00000583976 ARMCX2Q7L311 632 aa18.58■□□□□ 0.56
SKA2-209ENST00000583976 SKAP1Q86WV1 359 aa18.58■□□□□ 0.56
SKA2-209ENST00000583976 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.58■□□□□ 0.56
SKA2-209ENST00000583976 ZNF444Q8N0Y2 327 aaPredicted RBP18.58■□□□□ 0.56
SKA2-209ENST00000583976 MSL3Q8N5Y2 521 aaKnown RBP18.58■□□□□ 0.56
SKA2-209ENST00000583976 KLHDC9Q8NEP7 349 aa18.58■□□□□ 0.56
SKA2-209ENST00000583976 RNPC3Q96LT9 517 aaKnown RBP18.58■□□□□ 0.56
SKA2-209ENST00000583976 CDX2Q99626 313 aaPredicted RBP18.58■□□□□ 0.56
SKA2-209ENST00000583976 CTDP1Q9Y5B0 961 aaPredicted RBP18.58■□□□□ 0.56
SKA2-209ENST00000583976 PATL2C9JE40 543 aaKnown RBP18.57■□□□□ 0.56
SKA2-209ENST00000583976 RAG1P15918 1043 aa18.57■□□□□ 0.56
SKA2-209ENST00000583976 FAAP100Q0VG06 881 aa18.57■□□□□ 0.56
SKA2-209ENST00000583976 KCNA10Q16322 511 aa18.57■□□□□ 0.56
SKA2-209ENST00000583976 ZMYM1Q5SVZ6 1142 aa18.57■□□□□ 0.56
SKA2-209ENST00000583976 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.57■□□□□ 0.56
SKA2-209ENST00000583976 ANKRD35Q8N283 1001 aa18.57■□□□□ 0.56
SKA2-209ENST00000583976 NEDD1Q8NHV4 660 aa18.57■□□□□ 0.56
SKA2-209ENST00000583976 MYLIPQ8WY64 445 aa18.57■□□□□ 0.56
SKA2-209ENST00000583976 MKL1Q969V6 931 aa18.57■□□□□ 0.56
SKA2-209ENST00000583976 KATNBL1Q9H079 304 aa18.57■□□□□ 0.56
SKA2-209ENST00000583976 NAPBQ9H115 298 aa18.57■□□□□ 0.56
SKA2-209ENST00000583976 OSBPL3Q9H4L5 887 aa18.57■□□□□ 0.56
SKA2-209ENST00000583976 INCENPQ9NQS7 918 aa18.57■□□□□ 0.56
SKA2-209ENST00000583976 FEM1BQ9UK73 627 aa18.57■□□□□ 0.56
SKA2-209ENST00000583976 FAM184BQ9ULE4 1060 aa18.57■□□□□ 0.56
SKA2-209ENST00000583976 TACC3Q9Y6A5 838 aa18.57■□□□□ 0.56
SKA2-209ENST00000583976 ASTN1O14525 1302 aa18.56■□□□□ 0.56
SKA2-209ENST00000583976 ZNF536O15090 1300 aa18.56■□□□□ 0.56
SKA2-209ENST00000583976 TRIM6-TRIM34B2RNG4 842 aa18.56■□□□□ 0.56
SKA2-209ENST00000583976 NMT2O60551 498 aa18.56■□□□□ 0.56
SKA2-209ENST00000583976 C6orf222P0C671 652 aaPredicted RBP18.56■□□□□ 0.56
SKA2-209ENST00000583976 BMP3P12645 472 aa18.56■□□□□ 0.56
SKA2-209ENST00000583976 SNAP25P60880 206 aa18.56■□□□□ 0.56
SKA2-209ENST00000583976 TFAP4Q01664 338 aa18.56■□□□□ 0.56
SKA2-209ENST00000583976 CNTN2Q02246 1040 aa18.56■□□□□ 0.56
SKA2-209ENST00000583976 ACVR2BQ13705 512 aa18.56■□□□□ 0.56
SKA2-209ENST00000583976 CCDC144BQ3MJ40 725 aa18.56■□□□□ 0.56
SKA2-209ENST00000583976 ZNF467Q7Z7K2 595 aaPredicted RBP18.56■□□□□ 0.56
SKA2-209ENST00000583976 RILPL2Q969X0 211 aa18.56■□□□□ 0.56
SKA2-209ENST00000583976 COL25A1Q9BXS0 654 aaPredicted RBP18.56■□□□□ 0.56
SKA2-209ENST00000583976 TMEM39AQ9NV64 488 aa18.56■□□□□ 0.56
SKA2-209ENST00000583976 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.56■□□□□ 0.56
SKA2-209ENST00000583976 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.55■□□□□ 0.56
SKA2-209ENST00000583976 TMEM232C9JQI7 657 aa18.55■□□□□ 0.56
SKA2-209ENST00000583976 DUSP11O75319 330 aaKnown RBP18.55■□□□□ 0.56
SKA2-209ENST00000583976 SMAD3P84022 425 aaKnown RBP18.55■□□□□ 0.56
SKA2-209ENST00000583976 FPGSQ05932 587 aa18.55■□□□□ 0.56
SKA2-209ENST00000583976 CTDSPL2Q05D32 466 aa18.55■□□□□ 0.56
SKA2-209ENST00000583976 VPS53Q5VIR6 699 aa18.55■□□□□ 0.56
SKA2-209ENST00000583976 ANKRD33Q7Z3H0 272 aa18.55■□□□□ 0.56
SKA2-209ENST00000583976 CCDC144CPQ8IYA2 1237 aa18.55■□□□□ 0.56
SKA2-209ENST00000583976 AGBL1Q96MI9 1066 aa18.55■□□□□ 0.56
SKA2-209ENST00000583976 TSEN34Q9BSV6 310 aaKnown RBP18.55■□□□□ 0.56
SKA2-209ENST00000583976 NACAP1Q9BZK3 213 aa18.55■□□□□ 0.56
SKA2-209ENST00000583976 SEMA6BQ9H3T3 888 aa18.55■□□□□ 0.56
SKA2-209ENST00000583976 ZNF287Q9HBT7 754 aa18.55■□□□□ 0.56
SKA2-209ENST00000583976 A1CFQ9NQ94 594 aaKnown RBP18.55■□□□□ 0.56
SKA2-209ENST00000583976 RNF146Q9NTX7 359 aa18.55■□□□□ 0.56
SKA2-209ENST00000583976 TBX21Q9UL17 535 aa18.55■□□□□ 0.56
SKA2-209ENST00000583976 MOXD2PA6NHM9 499 aa18.54■□□□□ 0.56
SKA2-209ENST00000583976 CTAGE5O15320 804 aa18.54■□□□□ 0.56
SKA2-209ENST00000583976 CST5P28325 142 aaPredicted RBP18.54■□□□□ 0.56
SKA2-209ENST00000583976 STAT2P52630 851 aa18.54■□□□□ 0.56
SKA2-209ENST00000583976 OAZ1P54368 228 aa18.54■□□□□ 0.56
SKA2-209ENST00000583976 PDE4BQ07343 736 aa18.54■□□□□ 0.56
SKA2-209ENST00000583976 IKQ13123 557 aaPredicted RBP18.54■□□□□ 0.56
SKA2-209ENST00000583976 KCTD1Q719H9 257 aa18.54■□□□□ 0.56
SKA2-209ENST00000583976 CHST13Q8NET6 341 aa18.54■□□□□ 0.56
SKA2-209ENST00000583976 EVI5LQ96CN4 794 aa18.54■□□□□ 0.56
SKA2-209ENST00000583976 UPF3AQ9H1J1 476 aaKnown RBP18.54■□□□□ 0.56
SKA2-209ENST00000583976 ACAD9Q9H845 621 aa18.54■□□□□ 0.56
SKA2-209ENST00000583976 FBXO40Q9UH90 709 aa18.54■□□□□ 0.56
SKA2-209ENST00000583976 SYNPO2Q9UMS6 1093 aa18.54■□□□□ 0.56
SKA2-209ENST00000583976 MTMR7Q9Y216 660 aa18.54■□□□□ 0.56
SKA2-209ENST00000583976 SOWAHBA6NEL2 793 aa18.53■□□□□ 0.56
SKA2-209ENST00000583976 ASGR1P07306 291 aa18.53■□□□□ 0.56
SKA2-209ENST00000583976 MCCP23508 829 aa18.53■□□□□ 0.56
SKA2-209ENST00000583976 BEX3Q00994 111 aa18.53■□□□□ 0.56
SKA2-209ENST00000583976 CCDC174Q6PII3 467 aa18.53■□□□□ 0.56
SKA2-209ENST00000583976 FAM133AQ8N9E0 248 aa18.53■□□□□ 0.56
SKA2-209ENST00000583976 MAFAQ8NHW3 353 aaPredicted RBP18.53■□□□□ 0.56
SKA2-209ENST00000583976 NUP133Q8WUM0 1156 aa18.53■□□□□ 0.56
SKA2-209ENST00000583976 GMCL1Q96IK5 515 aa18.53■□□□□ 0.56
SKA2-209ENST00000583976 STX8Q9UNK0 236 aa18.53■□□□□ 0.56
SKA2-209ENST00000583976 SLC1A4P43007 532 aa18.52■□□□□ 0.56
SKA2-209ENST00000583976 LRRFIP1Q32MZ4 808 aaKnown RBP18.52■□□□□ 0.56
SKA2-209ENST00000583976 MUM1L1Q5H9M0 696 aa18.52■□□□□ 0.56
SKA2-209ENST00000583976 GLT1D1Q96MS3 346 aa18.52■□□□□ 0.56
SKA2-209ENST00000583976 ABHD16BQ9H3Z7 469 aa18.52■□□□□ 0.56
SKA2-209ENST00000583976 IL17RBQ9NRM6 502 aa18.52■□□□□ 0.56
SKA2-209ENST00000583976 CHD9Q3L8U1 2897 aa18.52■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms